halophFGD

Basic Information

Locus ID: Ag8G00106

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: BTB/POZ domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr8	2741839	2743349	-	Ag8G00106

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.18	51,556.73 Da	41.93	85.35	-0.31

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF02214	BTB/POZ domain	18	102	1.8E-12	IPR003131
SUPERFAMILY	SSF50978	WD40 repeat-like	127	404	6.71E-8	IPR036322
SUPERFAMILY	SSF54695	POZ domain	16	104	1.18E-16	IPR011333
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	1	111	8.1E-20	IPR011333

Gene Ontology

Biological Process:

GO:0051260 (protein homooligomerization)

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G09030.1	BTB/POZ domain-containing protein.
RefSeq	XP_017219966.1	PREDICTED: LOW QUALITY PROTEIN: BTB/POZ domain-containing protein At3g09030 [Daucus carota subsp. sativus]
Swiss-Prot	Q9S7R7	Protein ENDOPLASMIC RETICULUM-ARRESTED PEN3 OS=Arabidopsis thaliana OX=3702 GN=EAP3 PE=1 SV=1
TrEMBL	A0A175YJL3	BTB_2 domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_028823 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	11.711446	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	9.938473	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	10.411249	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	13.049722	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	12.631971	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	11.01053	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	12.686169	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	12.206011	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	13.676822	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	14.234763	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	16.463369	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	19.977133	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	19.422462	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	21.759094	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	12.264223	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	16.261677	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	17.340792	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	16.346191	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	11.597725	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	15.570189	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	18.309227	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	19.084585	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	19.452681	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	18.338354	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	18.645105	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	21.15391	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	17.008121	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	14.006957	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	17.009493	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	7.882715		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	8.182422		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	6.863321		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	29.053883		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	18.87628		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	35.019951		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	19.15518		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	9.965485		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	12.996029		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	8.292918	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	8.806334	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	5.770858	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	14.958265	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	12.872161	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	22.37689	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	19.388809	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	14.932602	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	25.048117	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	8.097428	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	11.302172	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	9.020264	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	2	jg14794, jg23483
Aizoaceae	Mesembryanthemum crystallinum	2	gene_14732, gene_24901
Amaranthaceae	Atriplex hortensis	2	Ah004613, Ah030753
Amaranthaceae	Beta vulgaris	2	BVRB_5g100390, BVRB_6g145370
Amaranthaceae	Salicornia bigelovii	5	Sbi_jg12309, Sbi_jg23884, Sbi_jg26686, Sbi_jg33878 ... Sbi_jg7708
Amaranthaceae	Salicornia europaea	2	Seu_jg12309, Seu_jg15198
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00001173, GOSA_00002153
Amaranthaceae	Suaeda glauca	6	Sgl52019, Sgl52043, Sgl54203, Sgl57322, Sgl59512, Sgl59534
Amaranthaceae	Chenopodium album	7	gene:ENSEOMG00000000586, gene:ENSEOMG00000002728 ... gene:ENSEOMG00000005628, gene:ENSEOMG00000021675, gene:ENSEOMG00000021971, gene:ENSEOMG00000024681, gene:ENSEOMG00000025747
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.5AG0007260, CQ.Regalona.r1.5BG0007540 ... CQ.Regalona.r1.6AG0009990, CQ.Regalona.r1.6BG0011450
Anacardiaceae	Pistacia vera	2	pistato.v30135890, pistato.v30285630
Apiaceae	Apium graveolens	5	Ag6G00689, Ag6G01819, Ag7G00148, Ag7G01844, Ag8G00106
Arecaceae	Cocos nucifera	3	COCNU_02G010650, COCNU_04G000480, COCNU_10G007440
Arecaceae	Phoenix dactylifera	3	gene-LOC103704046, gene-LOC103710355, gene-LOC103713501
Asparagaceae	Asparagus officinalis	1	AsparagusV1_04.123.V1.1
Asteraceae	Flaveria trinervia	4	Ftri13G12329, Ftri14G02563, Ftri16G14214, Ftri9G01255
Brassicaceae	Arabidopsis thaliana	2	AT3G09030.1, AT5G41330.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10020689m.g.v1.0, Thhalv10027773m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp3g07450.v2.2, Sp7g00610.v2.2, SpUn0010_0090.v2.2
Brassicaceae	Brassica nigra	4	BniB01g016370.2N, BniB01g025030.2N, BniB01g055580.2N ... BniB02g069950.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq03G0315, Ceq08G1040
Casuarinaceae	Casuarina glauca	2	Cgl03G0393, Cgl08G1065
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno04g17000, gene.Cymno14g02710
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate03g08190, gene.Thate07g13180
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-3706
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG01.1051, evm.TU.LG10.1424
Plantaginaceae	Plantago ovata	2	Pov_00006487, Pov_00028313
Plumbaginaceae	Limonium bicolor	2	Lb2G09285, Lb3G17253
Poaceae	Echinochloa crus-galli	4	AH01.4249, AH03.923, BH03.1061, CH03.1214
Poaceae	Eleusine coracana subsp. coracana	3	gene-QOZ80_3AG0242140, gene-QOZ80_3BG0285990 ... gene-QOZ80_7AG0564550
Poaceae	Hordeum vulgare	2	HORVU.MOREX.r3.4HG0389660.1.CDS1 ... HORVU.MOREX.r3.7HG0666260.1
Poaceae	Lolium multiflorum	2	gene-QYE76_009767, gene-QYE76_069112
Poaceae	Oryza coarctata	4	Oco05G008960, Oco06G009330, Oco13G005710, Oco14G006450
Poaceae	Oryza sativa	2	LOC_Os03g15800.1, LOC_Os07g23720.1
Poaceae	Paspalum vaginatum	2	gene-BS78_01G407600, gene-BS78_02G085600
Poaceae	Sporobolus alterniflorus	4	Chr01G030480, Chr12G009110, Chr24G005720, Chr28G005810
Poaceae	Thinopyrum elongatum	2	Tel4E01G375700, Tel7E01G343500
Poaceae	Triticum dicoccoides	6	gene_TRIDC4AG012280, gene_TRIDC4BG038160 ... gene_TRIDC7AG023080, gene_TRIDC7AG023140, gene_TRIDC7BG013490, gene_TRIDC7BG013680
Poaceae	Triticum aestivum	7	TraesCS4A02G090000.1.cds1, TraesCS4B02G214200.1.cds1 ... TraesCS4D02G214900.1.cds1, TraesCS7A02G185900.1.cds1, TraesCS7B02G090400.1, TraesCS7D02G186800.1.cds1, TraesCS7D02G187700.1
Poaceae	Zea mays	4	Zm00001eb203610_P001, Zm00001eb305940_P001 ... Zm00001eb371450_P001, Zm00001eb398010_P001
Poaceae	Zoysia japonica	2	nbis-gene-3810, nbis-gene-43170
Poaceae	Zoysia macrostachya	2	Zma_g3970, Zma_g5041
Portulacaceae	Portulaca oleracea	4	evm.TU.LG04.3096, evm.TU.LG13.1466, evm.TU.LG16.473 ... evm.TU.LG21.1129
Posidoniaceae	Posidonia oceanica	5	gene.Posoc01g09500, gene.Posoc02g00170, gene.Posoc03g14950 ... gene.Posoc06g03730, gene.Posoc06g06340
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_16_RagTag.165, evm.TU.Scaffold_3_RagTag.545
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-1419, nbisL1-mrna-18221, nbisL1-mrna-22404
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-10293, nbisL1-mrna-11629, nbisL1-mrna-21368
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-20332, nbisL1-mrna-6264, nbisL1-mrna-8539
Rhizophoraceae	Kandelia candel	3	add.evm.TU.utg000007l.154, add.evm.TU.utg000019l.372 ... add.evm.TU.utg000022l.220
Rhizophoraceae	Kandelia obovata	3	Maker00012821, Maker00014259, Maker00018378
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-18160, nbisL1-mrna-19298, nbisL1-mrna-23214
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-10911, nbisL1-mrna-2032, nbisL1-mrna-6695
Salicaceae	Populus euphratica	3	populus_peu03580, populus_peu25506, populus_peu34422
Solanaceae	Lycium barbarum	3	gene-LOC132609903, gene-LOC132630718, gene-LOC132634917
Solanaceae	Solanum chilense	3	SOLCI002360600, SOLCI002556400, SOLCI003703400
Solanaceae	Solanum pennellii	3	gene-LOC107026727, gene-LOC107026814, gene-LOC107031122
Tamaricaceae	Reaumuria soongarica	2	STRG.23444_chr05_+, STRG.3192_chr01_-
Tamaricaceae	Tamarix chinensis	5	TC01G1661, TC01G4266, TC04G0614, TC05G1903, TC07G0308
Zosteraceae	Zostera marina	2	Zosma03g32410.v3.1, Zosma05g27430.v3.1