Basic Information
Locus ID:
Ag7G02452
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 270667838 | 270668203 | + | Ag7G02452 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.66 | 7,617.81 Da | 26.50 | 112.71 | 0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 5 | 70 | 1.28E-6 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 43 | 2.9E-11 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28880.1 | casein kinase I-like 3. | 0 |
| RefSeq | XP_017240236.1 | PREDICTED: protein CASEIN KINASE I-LIKE 3-like isoform X2 [Daucus carota subsp. sativus] | 0 |
| Q93Z18 | Casein kinase 1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=CKL3 PE=1 SV=1 | 0 | |
| TrEMBL | S8CQ30 | Protein kinase domain-containing protein OS=Genlisea aurea OX=192259 GN=M569_07841 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah006375 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000010269 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.4AG0011600 |
| Apiaceae | Apium graveolens | 6 | Ag10G00887, Ag4G00179, Ag5G00920, Ag5G01818, Ag6G02731 ... |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_04.84.V1.1, AsparagusV1_Unassigned.1111.V1.1 |
| Brassicaceae | Brassica nigra | 1 | BniB03g068750.2N |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G02064 |
| Poaceae | Echinochloa crus-galli | 1 | CH01.3984 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_005496, gene-QYE76_008607 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr01G025590 |
| Poaceae | Thinopyrum elongatum | 2 | Tel1E01G305200, Tel6E01G260700 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3AG018550 |
| Poaceae | Zea mays | 7 | Zm00001eb046190_P001, Zm00001eb096600_P001 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-29461, nbis-gene-39846 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-8091 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-4613 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-1978 |
| Salicaceae | Populus euphratica | 1 | populus_peu22068 |