Basic Information
Locus ID:
Ag7G02091
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Short Name:
5
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 253922769 | 253927364 | - | Ag7G02091 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.67 | 31,426.18 Da | 51.45 | 75.62 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14733 | BACK | 201 | 242 | 0.00259416 | - |
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 94 | 181 | 1.59349E-29 | - |
| Pfam | PF00651 | BTB/POZ domain | 93 | 197 | 2.7E-24 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 82 | 196 | 9.81E-30 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 77 | 198 | 1.5E-32 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 199 | 275 | 5.0E-10 | - |
| SMART | SM00225 | BTB_4 | 95 | 198 | 1.2E-28 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 95 | 168 | 18.678892 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| Coils | Coil | Coil | 48 | 72 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G08455.1 | BTB/POZ domain-containing protein. | 0 |
| RefSeq | XP_017230809.1 | PREDICTED: BTB/POZ domain-containing protein At4g08455 [Daucus carota subsp. sativus] | 0 |
| Q6DBN1 | BTB/POZ domain-containing protein At4g08455 OS=Arabidopsis thaliana OX=3702 GN=At4g08455 PE=1 SV=1 | 0 | |
| TrEMBL | A0A166IAU4 | BTB domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_003593 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| PRJNA723697 | SRX10692252 | 31.229095 | Shengqin NO.2 | seed | S1-1 | S1-1 | initial formation stage (S1) |
| PRJNA723697 | SRX10692254 | 33.170147 | Shengqin NO.2 | seed | S1-3 | S1-3 | initial formation stage (S1) |
| PRJNA723697 | SRX10692255 | 41.213779 | Shengqin NO.2 | seed | S3-1 | S3-1 | middle development stage (S3) |
| PRJNA723697 | SRX10692256 | 33.12743 | Shengqin NO.2 | seed | S3-2 | S3-2 | middle development stage (S3) |
| PRJNA723697 | SRX10692257 | 37.164825 | Shengqin NO.2 | seed | S3-3 | S3-3 | middle development stage (S3) |
| PRJNA723697 | SRX10692258 | 26.803955 | Shengqin NO.2 | seed | S5-1 | S5-1 | maturation stage (S5) |
| PRJNA723697 | SRX10692259 | 36.456543 | Shengqin NO.2 | seed | S5-2 | S5-2 | maturation stage (S5) |
| PRJNA723697 | SRX10692260 | 29.788952 | Shengqin NO.2 | seed | S5-3 | S5-3 | maturation stage (S5) |
| PRJNA884666 | SRX17729272 | 53.213364 | celery | anther | W99A-r1 | male sterile line | |
| PRJNA884666 | SRX17729273 | 51.616711 | celery | anther | W99A-r2 | male sterile line | |
| PRJNA884666 | SRX17729274 | 57.93026 | celery | anther | W99A-r3 | male sterile line | |
| PRJNA884666 | SRX17729275 | 46.704552 | celery | anther | W99B-r1 | maintainer line | |
| PRJNA884666 | SRX17729276 | 47.300877 | celery | anther | W99B-r2 | maintainer line | |
| PRJNA884666 | SRX17729277 | 49.407166 | celery | anther | W99B-r3 | maintainer line | |
| PRJNA884180 | SRX17743889 | 25.006451 | var. secalinum Yablochny | collenchyma | Col_S1_rep1-1 | ||
| PRJNA884180 | SRX17748056 | 20.535807 | var. secalinum Yablochny | collenchyma | Col_S1_rep3 | biological replicate 3 | |
| PRJNA884180 | SRX17748057 | 22.705904 | var. secalinum Yablochny | collenchyma | Col_S1_rep4 | biological replicate 4 | |
| PRJNA884180 | SRX17748678 | 22.018686 | var. secalinum Yablochny | parenchyma | Par_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17748679 | 17.766623 | var. secalinum Yablochny | parenchyma | Par_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17748680 | 28.771095 | var. secalinum Yablochny | parenchyma | Par_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17748681 | 34.52272 | var. secalinum Yablochny | parenchyma | Par_S1_rep4 | Biological replicate 4 | |
| PRJNA884180 | SRX17748898 | 22.980959 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17748899 | 24.859451 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17748900 | 24.211861 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17748901 | 23.482744 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep4 | Biological replicate 4 | |
| PRJNA884180 | SRX17749129 | 22.129406 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17749130 | 18.544737 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17749131 | 18.265074 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17749132 | 22.232685 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep4 | Biological replicate 4 | |
| PRJNA1124269 | SRX24936411 | 19.637049 | leaf | CK1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936412 | 20.048466 | leaf | CK2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936413 | 17.323135 | leaf | CK3 | replicate=biological replicate3 | ||
| PRJNA1124269 | SRX24936414 | 29.547905 | leaf | D1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936415 | 37.46804 | leaf | D2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936416 | 31.179806 | leaf | D3 | replicate=biological replicate3 | ||
| PRJNA1124269 | SRX24936417 | 30.548681 | leaf | MD1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936418 | 18.683781 | leaf | MD2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936419 | 29.397182 | leaf | MD3 | replicate=biological replicate3 | ||
| PRJNA387092 | SRX2833309 | 22.592869 | shanghaihuangxin | leaf | leaves between 0.5 and 1 cm in breadth, folded; | stage 2 | |
| PRJNA387092 | SRX2833321 | 23.480898 | shanghaihuangxin | leaf | leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion | stage 5 | |
| PRJNA387092 | SRX2833323 | 11.220491 | shanghaihuangxin | leaf | leaves >3 cm, unfolded, with clearstem extension | stage 7 | |
| PRJNA543957 | SRX5879598 | 45.199978 | Zhangzhou lvqing | stem | Se3 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879599 | 25.792686 | Zhangzhou lvqing | stem | Se2 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879600 | 14.132305 | Zhangzhou lvqing | stem | Mock2 | mock | |
| PRJNA543957 | SRX5879601 | 13.291732 | Zhangzhou lvqing | stem | Mock1 | mock | |
| PRJNA543957 | SRX5879602 | 59.136902 | Zhangzhou lvqing | stem | Se1 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879603 | 18.453518 | Zhangzhou lvqing | stem | Mock3 | mock | |
| PRJNA609149 | SRX7815917 | 37.991165 | Jinnan Shiqin | flower bud | early flower bud | early flower bud | |
| PRJNA609149 | SRX7815918 | 37.777927 | Jinnan Shiqin | flower bud | middle flower bud | middle flower bud | |
| PRJNA609149 | SRX7815919 | 42.279396 | Jinnan Shiqin | flower bud | early flowering period | early flowering period |
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg12051, jg6438 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_22954 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah024168 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_1g010330 |
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg28314, Sbi_jg28317, Sbi_jg51363 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg7160, Seu_jg7163 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00020153 |
| Amaranthaceae | Suaeda glauca | 5 | Sgl11682, Sgl11683, Sgl17182, Sgl17183, Sgl17196 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000015948, gene:ENSEOMG00000036180 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1AG0013130, CQ.Regalona.r1.1BG0012930 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30044500, pistato.v30044520 |
| Apiaceae | Apium graveolens | 1 | Ag7G02091 |
| Arecaceae | Cocos nucifera | 1 | COCNU_01G020260 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103702610 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.2758.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri10G19431 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G08455.1 |
| Brassicaceae | Eutrema salsugineum | 5 | Thhalv10016014m.g.v1.0, Thhalv10023183m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 2 | Sp6g09470.v2.2, Sp6g09480.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB08g034530.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G1884 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl03G2024 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno07g08880 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g13290 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-5261 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG06.817 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00022673, Pov_00037865 |
| Plumbaginaceae | Limonium bicolor | 5 | Lb0G37297, Lb3G19673, Lb4G24392, Lb7G34071, Lb8G35927 |
| Poaceae | Echinochloa crus-galli | 3 | AH03.753, BH03.890, CH03.996 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_7AG0562320 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0546130.1 |
| Poaceae | Oryza coarctata | 2 | Oco13G004700, Oco14G005470 |
| Poaceae | Oryza sativa | 1 | LOC_Os07g15490.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G114600 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr19G015530, Chr24G004750, Chr28G004090 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G119200 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG005500, gene_TRIDC6BG008100 |
| Poaceae | Triticum aestivum | 4 | TraesCS6A02G045900.1, TraesCS6A02G046100.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb304620_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-26518, nbis-gene-52774 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g4995, Zma_g6246 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc05g11290 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_8_RagTag.601 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-9651 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-2492 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-18157 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000018l.617, evm.TU.utg000018l.618 |
| Rhizophoraceae | Kandelia obovata | 4 | Maker00002828, Maker00002971, Maker00003012, Maker00003249 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-2892 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-20437 |
| Salicaceae | Populus euphratica | 2 | populus_peu14792, populus_peu32468 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132606296 |
| Solanaceae | Solanum chilense | 1 | SOLCI002928100 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107009030 |
| Zosteraceae | Zostera marina | 1 | Zosma05g16350.v3.1 |