halophFGD

Basic Information

Locus ID: Ag7G02017

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: mitogen-activated protein kinase kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr7	248717151	248718433	+	Ag7G02017

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.09	34,774.59 Da	48.61	89.68	-0.19

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd06623	PKc_MAPKK_plant_like	41	304	2.96744E-145	-
Pfam	PF00069	Protein kinase domain	44	304	2.1E-64	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	41	306	4.18E-78	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	125	311	4.5E-52	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	23	123	8.3E-27	-
SMART	SM00220	serkin_6	43	304	7.1E-83	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	43	304	45.671913	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	161	173	-	IPR008271
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	49	72	-	IPR017441

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K20604 (mitogen-activated protein kinase kinase 9 [EC:2.7.12.2])

Pathway:

ko04016 (MAPK signaling pathway - plant) map04016 (MAPK signaling pathway - plant)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G73500.1	MAP kinase kinase 9. member of MAP Kinase Kinase family. Autophosphorylates and also phosphorylates MPK3 and MPK6. Independently involved in ethylene and calmalexin biosynthesis. Induces transcription of ACS2, ACS6, ERF1, ERF2, ERF5, ERF6, CYP79B2, CYP79B3, CYP71A13 and PAD3.
RefSeq	XP_017217609.1	PREDICTED: mitogen-activated protein kinase kinase 9 [Daucus carota subsp. sativus]
Swiss-Prot	Q9FX43	Mitogen-activated protein kinase kinase 9 OS=Arabidopsis thaliana OX=3702 GN=MKK9 PE=1 SV=1
TrEMBL	A0A166I8V4	Protein kinase domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_003531 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	13.301303	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	6.981579	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	5.656544	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	5.886883	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	8.35419	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	5.604172	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	7.225439	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	1.18027	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	63.647312	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	62.508015	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	49.62989	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	29.763863	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	28.636847	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	14.219409	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	17.607069	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	18.455997	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	5.415966	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	47.932846	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	54.863293	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	63.144413	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	108.238121	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	38.899311	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	32.214191	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	24.49065	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	28.485796	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	13.494994	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	9.318703	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	13.064639	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	4.684475	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	11.501986		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	4.863295		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	7.163643		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	108.574478		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	49.645176		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	240.051712		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	114.069771		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	7.780803		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	51.583263		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	11.05313	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	47.725971	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	34.56213	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	195.200546	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	111.78595	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	170.085678	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	97.883415	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	164.700699	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	74.629066	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	79.262955	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	27.565989	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	26.951405	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	6	jg17957, jg22469, jg25129, jg25571, jg27080, jg27338
Aizoaceae	Mesembryanthemum crystallinum	3	gene_15040, gene_3081, gene_9566
Amaranthaceae	Atriplex hortensis	2	Ah016051, Ah018169
Amaranthaceae	Beta vulgaris	2	BVRB_3g056660, BVRB_8g189020
Amaranthaceae	Salicornia bigelovii	5	Sbi_jg15218, Sbi_jg23246, Sbi_jg25757, Sbi_jg56037 ... Sbi_jg9581
Amaranthaceae	Salicornia europaea	4	Seu_jg17059, Seu_jg17069, Seu_jg19057, Seu_jg26515
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00020195, GOSA_00020471
Amaranthaceae	Suaeda glauca	4	Sgl02228, Sgl07384, Sgl43979, Sgl48738
Amaranthaceae	Chenopodium album	6	gene:ENSEOMG00000009146, gene:ENSEOMG00000012602 ... gene:ENSEOMG00000029941, gene:ENSEOMG00000033725, gene:ENSEOMG00000043703, gene:ENSEOMG00000046046
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.3AG0009240, CQ.Regalona.r1.3BG0009280 ... CQ.Regalona.r1.8AG0010560, CQ.Regalona.r1.8BG0013130
Apiaceae	Apium graveolens	3	Ag6G00811, Ag7G02017, Ag9G01021
Arecaceae	Cocos nucifera	6	COCNU_01G004520, COCNU_01G008740, COCNU_03G009700 ... COCNU_10G002380, COCNU_11G009300, COCNU_11G012630
Arecaceae	Phoenix dactylifera	8	gene-LOC103696013, gene-LOC103696762, gene-LOC103707100 ... gene-LOC103714629, gene-LOC103718404, gene-LOC103720430, gene-LOC120104299, gene-LOC120110793
Asparagaceae	Asparagus officinalis	2	AsparagusV1_03.1627.V1.1, AsparagusV1_10.107.V1.1
Asteraceae	Flaveria trinervia	4	Ftri2G23564, Ftri4G19911, Ftri4G25654, Ftri8G05494
Brassicaceae	Arabidopsis thaliana	6	AT1G18350.1, AT1G32320.1, AT1G51660.1, AT1G73500.1 ... AT3G06230.1, AT3G21220.1
Brassicaceae	Eutrema salsugineum	5	Thhalv10009403m.g.v1.0, Thhalv10011588m.g.v1.0 ... Thhalv10019452m.g.v1.0, Thhalv10021025m.g.v1.0, Thhalv10021961m.g.v1.0
Brassicaceae	Schrenkiella parvula	5	Sp1g28580.v2.2, Sp1g38310.v2.2, Sp3g19220.v2.2 ... Sp4g05470.v2.2, Sp5g28670.v2.2
Brassicaceae	Brassica nigra	8	BniB03g038910.2N, BniB04g048510.2N, BniB05g070700.2N ... BniB06g029100.2N, BniB07g004130.2N, BniB07g031780.2N, BniB07g031800.2N, BniB07g050020.2N
Casuarinaceae	Casuarina equisetifolia	5	Ceq01G0286, Ceq02G1082, Ceq03G2796, Ceq07G1520, Ceq07G1666
Casuarinaceae	Casuarina glauca	12	Cgl01G0299, Cgl02G1125, Cgl03G2950, Cgl07G1594, Cgl07G1599 ... Cgl07G1601, Cgl07G1603, Cgl07G1615, Cgl07G1617, Cgl07G1802, Cgl07G1807, Cgl09G0136
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno01g07800, gene.Cymno06g06950, gene.Cymno09g02310
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate04g11080, gene.Thate04g14720, gene.Thate08g22880
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-3741, nbisL1-mrna-658
Nitrariaceae	Nitraria sibirica	3	evm.TU.LG01.643, evm.TU.LG05.818, evm.TU.LG10.29
Plantaginaceae	Plantago ovata	7	Pov_00003044, Pov_00016472, Pov_00016478, Pov_00019958 ... Pov_00028889, Pov_00039186, Pov_00039190
Plumbaginaceae	Limonium bicolor	2	Lb3G18233, Lb3G18235
Poaceae	Echinochloa crus-galli	17	AH01.4472, AH01.832, AH01.835, AH06.601, AH07.3083, BH01.976 ... AH07.3728, BH01.978, BH07.2904, BH07.3548, CH01.1019, CH01.1021, CH01.5078, CH01.952, CH07.2985, CH07.3620, Contig192.113
Poaceae	Eleusine coracana subsp. coracana	12	gene-QOZ80_2AG0141750, gene-QOZ80_2AG0148430 ... gene-QOZ80_2BG0203800, gene-QOZ80_3AG0218900, gene-QOZ80_3AG0218910, gene-QOZ80_3AG0239430, gene-QOZ80_3BG0264140, gene-QOZ80_3BG0264150, gene-QOZ80_3BG0288610, gene-QOZ80_6AG0511900, gene-QOZ80_6BG0463800, gene-QOZ80_7AG0562820
Poaceae	Hordeum vulgare	7	HORVU.MOREX.r3.4HG0337540.1.CDS1 ... HORVU.MOREX.r3.4HG0337570.1.CDS1, HORVU.MOREX.r3.4HG0337580.1.CDS1, HORVU.MOREX.r3.4HG0395160.1.CDS1, HORVU.MOREX.r3.5HG0485450.1.CDS1, HORVU.MOREX.r3.6HG0622200.1.CDS1, HORVU.MOREX.r3.7HG0660310.1.CDS1
Poaceae	Lolium multiflorum	12	gene-QYE76_026119, gene-QYE76_027496, gene-QYE76_028122 ... gene-QYE76_062395, gene-QYE76_062396, gene-QYE76_062397, gene-QYE76_062402, gene-QYE76_062906, gene-QYE76_062907, gene-QYE76_062909, gene-QYE76_062912, gene-QYE76_069764
Poaceae	Oryza coarctata	8	Oco03G023780, Oco04G019490, Oco04G024320, Oco05G006910 ... Oco05G021810, Oco06G007130, Oco06G022570, Oco11G004220
Poaceae	Oryza sativa	6	LOC_Os02g46760.1, LOC_Os02g54600.1, LOC_Os03g12390.1 ... LOC_Os03g50550.1, LOC_Os06g09180.1, LOC_Os06g09190.1
Poaceae	Paspalum vaginatum	6	gene-BS78_01G105300, gene-BS78_01G105500 ... gene-BS78_01G432800, gene-BS78_04G231100, gene-BS78_04G301000, gene-BS78_10G070500
Poaceae	Puccinellia tenuiflora	1	Pt_Chr0400197
Poaceae	Sporobolus alterniflorus	13	Chr01G006950, Chr01G006970, Chr01G028260, Chr04G027120 ... Chr06G000730, Chr09G018080, Chr09G022920, Chr11G021190, Chr12G011200, Chr13G002260, Chr14G003040, Chr15G001980, Chr21G002290
Poaceae	Thinopyrum elongatum	7	Tel4E01G084700, Tel4E01G084900, Tel4E01G085100 ... Tel4E01G085300, Tel4E01G410600, Tel6E01G616900, Tel7E01G311500
Poaceae	Triticum dicoccoides	15	gene_TRIDC3BG008530, gene_TRIDC4AG008940 ... gene_TRIDC4AG041540, gene_TRIDC4AG041550, gene_TRIDC4AG041580, gene_TRIDC4AG041590, gene_TRIDC4BG007520, gene_TRIDC4BG007630, gene_TRIDC4BG007650, gene_TRIDC4BG007660, gene_TRIDC4BG042070, gene_TRIDC6AG052120, gene_TRIDC6BG060870, gene_TRIDC7AG018990, gene_TRIDC7BG008610
Poaceae	Triticum aestivum	22	TraesCS3B02G066300.1.cds1, TraesCS4A02G062600.1.cds1 ... TraesCS4A02G265900.1.cds1, TraesCS4A02G266000.1.cds1, TraesCS4A02G266100.1.cds1, TraesCS4A02G266200.1.cds1, TraesCS4A02G266300.1, TraesCS4B02G048100.1.cds1, TraesCS4B02G048600.1.cds1, TraesCS4B02G048900.1.cds1, TraesCS4B02G049000.1.cds1, TraesCS4B02G239400.1.cds1, TraesCS4D02G047900.1.cds1, TraesCS4D02G048500.1.cds1, TraesCS4D02G048800.1.cds1, TraesCS4D02G049100.1.cds1, TraesCS4D02G239400.1.cds1, TraesCS6B02G379500.1.cds1, TraesCS6D02G328800.1.cds1, TraesCS7A02G154900.1.cds1, TraesCS7B02G059000.1.cds1, TraesCS7D02G155100.1.cds1
Poaceae	Zea mays	8	Zm00001eb009250_P001, Zm00001eb055060_P001 ... Zm00001eb055090_P001, Zm00001eb192730_P001, Zm00001eb216150_P001, Zm00001eb216200_P001, Zm00001eb251330_P001, Zm00001eb374270_P001
Poaceae	Zoysia japonica	8	nbis-gene-14841, nbis-gene-15933, nbis-gene-2423 ... nbis-gene-34927, nbis-gene-39966, nbis-gene-4024, nbis-gene-4969, nbis-gene-8483
Poaceae	Zoysia macrostachya	8	Zma_g14588, Zma_g17303, Zma_g1745, Zma_g29253, Zma_g2948 ... Zma_g31500, Zma_g4118, Zma_g634
Portulacaceae	Portulaca oleracea	3	evm.TU.LG04.2617, evm.TU.LG08.201, evm.TU.LG11.1475
Posidoniaceae	Posidonia oceanica	2	gene.Posoc03g14150, gene.Posoc08g01260
Rhizophoraceae	Bruguiera sexangula	5	evm.TU.Scaffold_11_RagTag.762, evm.TU.Scaffold_14_RagTag.552 ... evm.TU.Scaffold_1_RagTag.1100, evm.TU.Scaffold_2_RagTag.1206, evm.TU.Scaffold_4_RagTag.673
Rhizophoraceae	Carallia pectinifolia	6	nbisL1-mrna-14437, nbisL1-mrna-17734, nbisL1-mrna-17800 ... nbisL1-mrna-28690, nbisL1-mrna-3868, nbisL1-mrna-6512
Rhizophoraceae	Ceriops tagal	5	nbisL1-mrna-17276, nbisL1-mrna-3266, nbisL1-mrna-4596 ... nbisL1-mrna-7203, nbisL1-mrna-7866
Rhizophoraceae	Ceriops zippeliana	5	nbisL1-mrna-12371, nbisL1-mrna-1692, nbisL1-mrna-18785 ... nbisL1-mrna-21109, nbisL1-mrna-8195
Rhizophoraceae	Kandelia candel	5	add.evm.TU.utg000007l.36, add.evm.TU.utg000008l.155 ... add.evm.TU.utg000009l.174, add.evm.TU.utg000016l.355, add.evm.TU.utg000061l.10
Rhizophoraceae	Kandelia obovata	2	Maker00005067, Maker00008801
Rhizophoraceae	Rhizophora apiculata	5	nbisL1-mrna-17109, nbisL1-mrna-21133, nbisL1-mrna-21751 ... nbisL1-mrna-22590, nbisL1-mrna-23328
Rhizophoraceae	Rhizophora mangle	5	nbisL1-mrna-10559, nbisL1-mrna-13307, nbisL1-mrna-1636 ... nbisL1-mrna-5515, nbisL1-mrna-8432
Salicaceae	Populus euphratica	7	populus_peu03215, populus_peu07690, populus_peu19859 ... populus_peu21743, populus_peu28175, populus_peu29673, populus_peu29674
Solanaceae	Lycium barbarum	3	gene-LOC132617938, gene-LOC132632339, gene-LOC132633575
Solanaceae	Solanum chilense	2	SOLCI000546500, SOLCI004800700
Solanaceae	Solanum pennellii	2	gene-LOC107012116, gene-LOC107015149
Tamaricaceae	Reaumuria soongarica	2	STRG.21325_chr09_-, gene_11700
Tamaricaceae	Tamarix chinensis	2	TC05G0914, TC10G2553
Zosteraceae	Zostera marina	2	Zosma03g19400.v3.1, Zosma06g08250.v3.1