halophFGD

Basic Information

Locus ID: Ag7G01958

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Short Name: CIPK17

Description: Non-specific serine threonine protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr7	233854703	233855095	-	Ag7G01958

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.90	7,781.70 Da	38.75	105.80	-0.20

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Gene3D	G3DSA:3.30.310.80	Kinase associated domain 1, KA1	2	57	9.9E-11	-

KEGG Pathway

KO Term:

K07198 (5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.31])

Pathway:

ko04068 (FoxO signaling pathway) map04068 (FoxO signaling pathway) ko04140 (Autophagy - animal) map04140 (Autophagy - animal) ko04150 (mTOR signaling pathway) map04150 (mTOR signaling pathway) ko04151 (PI3K-Akt signaling pathway) map04151 (PI3K-Akt signaling pathway) ko04152 (AMPK signaling pathway) map04152 (AMPK signaling pathway) ko04211 (Longevity regulating pathway) map04211 (Longevity regulating pathway) ko04213 (Longevity regulating pathway - multiple species) map04213 (Longevity regulating pathway - multiple species) ko04371 (Apelin signaling pathway) map04371 (Apelin signaling pathway) ko04710 (Circadian rhythm)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G17510.2	CBL-interacting protein kinase 1. Encodes a CBL-interacting protein kinase. Specifically interacts with ECT1 and ECT2.
RefSeq	XP_017217652.1	PREDICTED: LOW QUALITY PROTEIN: CBL-interacting serine/threonine-protein kinase 1 [Daucus carota subsp. sativus]
Swiss-Prot	Q0D4B2	CBL-interacting protein kinase 21 OS=Oryza sativa subsp. japonica OX=39947 GN=CIPK21 PE=2 SV=2
TrEMBL	A0A164SL88	non-specific serine/threonine protein kinase OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_023410 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	22.054895	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	29.264801	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	2.176824	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	2.59132	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	0.811566	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	0	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	9.868947	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	17.511616	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	45.719116	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	49.686058	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	50.778664	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	58.67585	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	53.120564	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	39.526131	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	28.960159	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	7.462529	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	48.805641	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	29.655996	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	30.142033	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	20.591318	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	29.788078	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	42.260017	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	39.073071	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	33.454109	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	31.325718	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	36.529339	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	26.89296	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	30.914461	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	25.566446	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	13.289227		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	26.839428		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	13.785679		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	19.116291		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	27.495178		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	20.709942		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	13.300097		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	9.913835		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	10.380157		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	18.822294	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	15.175045	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	16.639093	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	22.783466	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	24.545591	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	47.948692	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	50.903263	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	23.511677	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	52.629139	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	48.906631	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	68.834671	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	78.212646	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Apiaceae	Apium graveolens	3	Ag5G01794, Ag7G01958, Ag8G01826
Arecaceae	Cocos nucifera	1	contig68889702G000010
Asparagaceae	Asparagus officinalis	2	AsparagusV1_07.1091.V1.1, AsparagusV1_07.1152.V1.1
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate01g15840
Poaceae	Sporobolus alterniflorus	1	Chr22G015600
Salicaceae	Populus euphratica	1	populus_peu12105