HalophFGD

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Basic Information
Locus ID: Ag7G01791
Species & Taxonomic ID: Apium graveolens & 4045
Genome Assembly: GCA_009905375.1
Description: serine threonine-protein kinase
Maps and Mapping Data
Chromosome Start End Strand ID
chr7 213797633 213807653 + Ag7G01791
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.71 63,244.08 Da 46.73 86.51 -0.40
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd13999 STKc_MAP3K-like 289 532 1.99155E-145 -
CDD cd04928 ACT_TyrKc 169 236 1.06567E-31 -
Pfam PF07714 Protein tyrosine and serine/threonine kinase 283 531 8.5E-74 IPR001245
SUPERFAMILY SSF55021 ACT-like 169 233 3.75E-10 -
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 267 531 8.79E-85 IPR011009
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 272 361 2.4E-30 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 362 549 7.2E-62 -
SMART SM00220 serkin_6 283 535 3.0E-68 IPR000719
ProSiteProfiles PS50011 Protein kinase domain profile. 283 536 45.389233 IPR000719
ProSiteProfiles PS51671 ACT domain profile. 171 250 13.407709 IPR002912
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 400 412 - IPR008271
PRINTS PR00109 Tyrosine kinase catalytic domain signature 440 450 5.5E-17 IPR001245
PRINTS PR00109 Tyrosine kinase catalytic domain signature 394 412 5.5E-17 IPR001245
PRINTS PR00109 Tyrosine kinase catalytic domain signature 357 370 5.5E-17 IPR001245
PRINTS PR00109 Tyrosine kinase catalytic domain signature 459 481 5.5E-17 IPR001245
PRINTS PR00109 Tyrosine kinase catalytic domain signature 503 525 5.5E-17 IPR001245
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K00799 (glutathione S-transferase [EC:2.5.1.18])
Pathway:
ko00480 (Glutathione metabolism) map00480 (Glutathione metabolism) ko00980 (Metabolism of xenobiotics by cytochrome P450) map00980 (Metabolism of xenobiotics by cytochrome P450) ko00982 (Drug metabolism - cytochrome P450) map00982 (Drug metabolism - cytochrome P450) ko00983 (Drug metabolism - other enzymes) map00983 (Drug metabolism - other enzymes) ko01524 (Platinum drug resistance) map01524 (Platinum drug resistance)
Reaction:
R03522 (RX + Glutathione <=> Halide + R-S-Glutathione) R07002 ((1R,2S)-Naphthalene 1,2-oxide + Glutathione <=> (1R)-Hydroxy-(2R)-glutathionyl-1,2-dihydronaphthalene) R07003 ((1S,2R)-Naphthalene 1,2-oxide + Glutathione <=> (1R)-Glutathionyl-(2R)-hydroxy-1,2-dihydronaphthalene) R07004 ((1S,2R)-Naphthalene 1,2-oxide + Glutathione <=> (1S)-Hydroxy-(2S)-glutathionyl-1,2-dihydronaphthalene) R07023 (1-Nitronaphthalene-7,8-oxide + Glutathione <=> 1-Nitro-7-hydroxy-8-glutathionyl-7,8-dihydronaphthalene) R07024 (1-Nitronaphthalene-7,8-oxide + Glutathione <=> 1-Nitro-7-glutathionyl-8-hydroxy-7,8-dihydronaphthalene) R07025 (1-Nitronaphthalene-5,6-oxide + Glutathione <=> 1-Nitro-5-hydroxy-6-glutathionyl-5,6-dihydronaphthalene) R07026 (1-Nitronaphthalene-5,6-oxide + Glutathione <=> 1-Nitro-5-glutathionyl-6-hydroxy-5,6-dihydronaphthalene) R07069 (Bromobenzene-3,4-oxide + Glutathione <=> 3,4-Dihydro-3-hydroxy-4-S-glutathionyl bromobenzene) R07070 (Bromobenzene-2,3-oxide + Glutathione <=> 2,3-Dihydro-2-S-glutathionyl-3-hydroxy bromobenzene) R07083 (Benzo[a]pyrene-4,5-oxide + Glutathione <=> 4,5-Dihydro-4-hydroxy-5-S-glutathionyl-benzo[a]pyrene) R07084 (Benzo[a]pyrene-7,8-dihydrodiol + Glutathione <=> 7,8-Dihydro-7-hydroxy-8-S-glutathionyl-benzo[a]pyrene + H2O) R07091 (2,2-Dichloroacetaldehyde + Glutathione <=> S-(2,2-Dichloro-1-hydroxy)ethyl glutathione) R07092 (1,1-Dichloroethylene epoxide + Glutathione <=> 2-(S-Glutathionyl)acetyl chloride + Hydrochloric acid) R07093 (Chloroacetyl chloride + Glutathione <=> S-(2-Chloroacetyl)glutathione + Hydrochloric acid) R07094 (2-(S-Glutathionyl)acetyl chloride + Glutathione <=> 2-(S-Glutathionyl)acetyl glutathione + Hydrochloric acid) R07100 (Trichloroethene + Glutathione <=> S-(1,2-Dichlorovinyl)glutathione + Hydrochloric acid) R07113 (1,2-Dibromoethane + Glutathione + H+ <=> Glutathione episulfonium ion + 2 Hydrobromic acid) R07116 (2-Bromoacetaldehyde + Glutathione <=> S-(Formylmethyl)glutathione + Hydrobromic acid) R08280 (Aldophosphamide + Glutathione <=> 4-Glutathionyl cyclophosphamide + H2O) R09409 (Aflatoxin B1-exo-8,9-epoxide + Glutathione <=> Aflatoxin B1exo-8,9-epoxide-GSH) R11905 (Hepatotoxins + Glutathione <=> R-S-Glutathione)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G38470.1 ACT-like protein tyrosine kinase family protein. 0
RefSeq XP_017230485.1 PREDICTED: serine/threonine-protein kinase STY46-like [Daucus carota subsp. sativus] 0
Swiss-Prot F4JTP5 Serine/threonine-protein kinase STY46 OS=Arabidopsis thaliana OX=3702 GN=STY46 PE=1 SV=1 0
TrEMBL A0A5B6ZC81 Putative serine/threonine-protein kinase HT1 OS=Davidia involucrata OX=16924 GN=Din_011363 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
PRJNA723697SRX1069225220.41251Shengqin NO.2seedS1-1S1-1initial formation stage (S1)
PRJNA723697SRX1069225414.452947Shengqin NO.2seedS1-3S1-3initial formation stage (S1)
PRJNA723697SRX1069225531.436943Shengqin NO.2seedS3-1S3-1middle development stage (S3)
PRJNA723697SRX1069225629.530209Shengqin NO.2seedS3-2S3-2middle development stage (S3)
PRJNA723697SRX1069225728.710363Shengqin NO.2seedS3-3S3-3middle development stage (S3)
PRJNA723697SRX1069225839.664055Shengqin NO.2seedS5-1S5-1maturation stage (S5)
PRJNA723697SRX1069225930.240108Shengqin NO.2seedS5-2S5-2maturation stage (S5)
PRJNA723697SRX1069226062.878288Shengqin NO.2seedS5-3S5-3maturation stage (S5)
PRJNA884666SRX1772927231.251181celeryantherW99A-r1male sterile line 
PRJNA884666SRX1772927330.530655celeryantherW99A-r2male sterile line 
PRJNA884666SRX1772927432.957672celeryantherW99A-r3male sterile line 
PRJNA884666SRX1772927529.183765celeryantherW99B-r1maintainer line
PRJNA884666SRX1772927629.547892celeryantherW99B-r2maintainer line
PRJNA884666SRX1772927727.000267celeryantherW99B-r3maintainer line
PRJNA884180SRX1774388912.134739var. secalinum YablochnycollenchymaCol_S1_rep1-1
PRJNA884180SRX1774805613.808779var. secalinum YablochnycollenchymaCol_S1_rep3biological replicate 3
PRJNA884180SRX1774805714.29489var. secalinum YablochnycollenchymaCol_S1_rep4biological replicate 4
PRJNA884180SRX1774867817.87133var. secalinum YablochnyparenchymaPar_S1_rep1Biological replicate 1
PRJNA884180SRX1774867915.411132var. secalinum YablochnyparenchymaPar_S1_rep2Biological replicate 2
PRJNA884180SRX1774868017.189131var. secalinum YablochnyparenchymaPar_S1_rep3Biological replicate 3
PRJNA884180SRX1774868118.204176var. secalinum YablochnyparenchymaPar_S1_rep4Biological replicate 4
PRJNA884180SRX1774889821.947126var. secalinum Yablochnyvascular bundleVas_S1_rep1Biological replicate 1
PRJNA884180SRX1774889922.401815var. secalinum Yablochnyvascular bundleVas_S1_rep2Biological replicate 2
PRJNA884180SRX1774890020.592144var. secalinum Yablochnyvascular bundleVas_S1_rep3Biological replicate 3
PRJNA884180SRX1774890120.861084var. secalinum Yablochnyvascular bundleVas_S1_rep4Biological replicate 4
PRJNA884180SRX1774912920.603703var. secalinum Yablochnypart of the celery petiole without collenchyma strandsCollenchyma-free_S1_rep1Biological replicate 1
PRJNA884180SRX1774913016.581131var. secalinum Yablochnypart of the celery petiole without collenchyma strandsCollenchyma-free_S1_rep2Biological replicate 2
PRJNA884180SRX1774913117.112799var. secalinum Yablochnypart of the celery petiole without collenchyma strandsCollenchyma-free_S1_rep3Biological replicate 3
PRJNA884180SRX1774913220.01149var. secalinum Yablochnypart of the celery petiole without collenchyma strandsCollenchyma-free_S1_rep4Biological replicate 4
PRJNA1124269SRX249364118.837592leafCK1replicate=biological replicate1
PRJNA1124269SRX2493641228.192753leafCK2replicate=biological replicate2
PRJNA1124269SRX2493641321.359009leafCK3replicate=biological replicate3
PRJNA1124269SRX2493641420.763634leafD1replicate=biological replicate1
PRJNA1124269SRX2493641517.675226leafD2replicate=biological replicate2
PRJNA1124269SRX2493641625.1231leafD3replicate=biological replicate3
PRJNA1124269SRX249364179.423814leafMD1replicate=biological replicate1
PRJNA1124269SRX2493641810.851155leafMD2replicate=biological replicate2
PRJNA1124269SRX249364199.541278leafMD3replicate=biological replicate3
PRJNA387092SRX283330968.692146shanghaihuangxinleafleaves between 0.5 and 1 cm in breadth, folded;stage 2
PRJNA387092SRX283332124.138512shanghaihuangxinleafleaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sionstage 5
PRJNA387092SRX283332323.281801shanghaihuangxinleafleaves >3 cm, unfolded, with clearstem extensionstage 7
PRJNA543957SRX587959820.899067Zhangzhou lvqingstemSe3100 ppm Na2SeO4
PRJNA543957SRX587959951.191093Zhangzhou lvqingstemSe2100 ppm Na2SeO4
PRJNA543957SRX5879600115.434906Zhangzhou lvqingstemMock2mock
PRJNA543957SRX5879601147.290558Zhangzhou lvqingstemMock1mock
PRJNA543957SRX587960219.295597Zhangzhou lvqingstemSe1100 ppm Na2SeO4
PRJNA543957SRX587960361.28299Zhangzhou lvqingstemMock3mock
PRJNA609149SRX781591723.173687Jinnan Shiqinflower budearly flower budearly flower bud
PRJNA609149SRX781591823.477886Jinnan Shiqinflower budmiddle flower budmiddle flower bud
PRJNA609149SRX781591924.465914Jinnan Shiqinflower budearly flowering periodearly flowering period
Network
🔍 Co-expression Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 4 jg11701, jg23009, jg26123, jg855
Aizoaceae Mesembryanthemum crystallinum 2 gene_21928, gene_23644
Amaranthaceae Atriplex hortensis 2 Ah009613, Ah012672
Amaranthaceae Beta vulgaris 2 BVRB_6g152560, BVRB_9g213400
Amaranthaceae Salicornia bigelovii 4 Sbi_jg12286, Sbi_jg42379, Sbi_jg44960, Sbi_jg47272
Amaranthaceae Salicornia europaea 2 Seu_jg21540, Seu_jg27178
Amaranthaceae Suaeda aralocaspica 2 GOSA_00002312, GOSA_00018843
Amaranthaceae Suaeda glauca 5 Sgl31891, Sgl37169, Sgl37235, Sgl55518, Sgl60737
Amaranthaceae Chenopodium album 6 gene:ENSEOMG00000002031, gene:ENSEOMG00000003941 ...
gene:ENSEOMG00000019814, gene:ENSEOMG00000027751, gene:ENSEOMG00000039110, gene:ENSEOMG00000052192
Amaranthaceae Chenopodium quinoa 4 CQ.Regalona.r1.6AG0008040, CQ.Regalona.r1.6BG0009000 ...
CQ.Regalona.r1.7BG0002420, CQ.Regalona.r1.9AG0022240
Anacardiaceae Pistacia vera 3 pistato.v30048850, pistato.v30211670, pistato.v30277570
Apiaceae Apium graveolens 3 Ag3G02552, Ag6G02383, Ag7G01791
Arecaceae Cocos nucifera 2 COCNU_08G009150, COCNU_09G004840
Arecaceae Phoenix dactylifera 3 gene-LOC103701060, gene-LOC103708687, gene-LOC103722908
Asparagaceae Asparagus officinalis 2 AsparagusV1_01.1114.V1.1, AsparagusV1_07.2397.V1.1
Asteraceae Flaveria trinervia 5 Ftri13G32896, Ftri18G15319, Ftri18G29776, Ftri4G02625 ...
Ftri5G04777
Brassicaceae Arabidopsis thaliana 3 AT2G17700.1, AT4G35780.1, AT4G38470.1
Brassicaceae Eutrema salsugineum 3 Thhalv10022635m.g.v1.0, Thhalv10024738m.g.v1.0 ...
Thhalv10024820m.g.v1.0
Brassicaceae Schrenkiella parvula 3 Sp3g31090.v2.2, Sp7g33540.v2.2, Sp7g37310.v2.2
Brassicaceae Brassica nigra 6 BniB02g014020.2N, BniB03g013310.2N, BniB03g015800.2N ...
BniB03g065790.2N, BniB04g026130.2N, BniB05g000860.2N
Casuarinaceae Casuarina equisetifolia 3 Ceq03G0815, Ceq06G0097, Ceq07G1776
Casuarinaceae Casuarina glauca 3 Cgl03G0895, Cgl06G0107, Cgl07G1923
Cymodoceaceae Cymodocea nodosa 3 gene.Cymno09g00760, gene.Cymno10g07940, gene.Cymno11g10700
Dunaliellaceae Dunaliella salina 1 Dusal.1229s00001.v1.0
Hydrocharitaceae Thalassia testudinum 3 gene.Thate02g12640, gene.Thate05g02030, gene.Thate08g17620
Malvaceae Hibiscus hamabo Siebold & Zucc. 1 nbisL1-mrna-5643
Nitrariaceae Nitraria sibirica 2 evm.TU.LG02.2831, evm.TU.LG08.359
Plantaginaceae Plantago ovata 2 Pov_00001725, Pov_00036963
Plumbaginaceae Limonium bicolor 3 Lb1G06109, Lb3G17284, Lb3G17286
Poaceae Echinochloa crus-galli 11 AH03.2795, AH03.2963, AH07.90, BH03.2947, BH06.2792 ...
BH07.204, BH07.205, CH03.3148, CH03.3329, CH03.4667, Contig181.218
Poaceae Eleusine coracana subsp. coracana 8 gene-QOZ80_2AG0099520, gene-QOZ80_2BG0152940 ...
gene-QOZ80_6AG0527620, gene-QOZ80_6AG0551200, gene-QOZ80_6BG0481530, gene-QOZ80_6BG0504780, gene-QOZ80_7AG0566900, gene-QOZ80_7BG0598310
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.5HG0501600.1, HORVU.MOREX.r3.6HG0549970.1
Poaceae Lolium multiflorum 3 gene-QYE76_007335, gene-QYE76_019755, gene-QYE76_041394
Poaceae Oryza coarctata 7 Oco03G000990, Oco04G000910, Oco12G017750, Oco13G007120 ...
Oco14G007690, Oco17G010920, Oco18G010840
Poaceae Oryza sativa 4 LOC_Os02g02780.1, LOC_Os06g50920.1, LOC_Os07g29330.1 ...
LOC_Os09g37230.1
Poaceae Paspalum vaginatum 5 gene-BS78_02G261100, gene-BS78_02G261200 ...
gene-BS78_02G276000, gene-BS78_04G014800, gene-BS78_10G259900
Poaceae Puccinellia tenuiflora 4 Pt_Chr0207057, Pt_Chr0306610, Pt_Chr0306613, Pt_Chr0701125
Poaceae Sporobolus alterniflorus 13 Chr05G000300, Chr06G035920, Chr0G004450, Chr0G027130 ...
Chr10G014620, Chr11G007620, Chr14G009750, Chr15G027090, Chr19G006200, Chr21G009880, Chr24G005230, Chr27G010650, Chr28G004440
Poaceae Thinopyrum elongatum 3 Tel2E01G442400, Tel5E01G535800, Tel6E01G168400
Poaceae Triticum dicoccoides 4 gene_TRIDC5AG049770, gene_TRIDC5BG053430 ...
gene_TRIDC6AG008850, gene_TRIDC6BG013260
Poaceae Triticum aestivum 6 TraesCS5A02G338800.1, TraesCS5B02G337300.1 ...
TraesCS5D02G343000.1, TraesCS6A02G071900.1, TraesCS6B02G096400.1, TraesCS6D02G070000.1
Poaceae Zea mays 4 Zm00001eb104040_P001, Zm00001eb230270_P001 ...
Zm00001eb319970_P003, Zm00001eb321250_P002
Poaceae Zoysia japonica 3 nbis-gene-35176, nbis-gene-52354, nbis-gene-9534
Poaceae Zoysia macrostachya 4 Zma_g29969, Zma_g31163, Zma_g32145, Zma_g5125
Portulacaceae Portulaca oleracea 4 evm.TU.LG02.1780, evm.TU.LG07.1982, evm.TU.LG09.152 ...
evm.TU.LG15.1159
Posidoniaceae Posidonia oceanica 4 gene.Posoc06g14500, gene.Posoc06g16960, gene.Posoc08g03360 ...
gene.Posoc08g05330
Rhizophoraceae Bruguiera sexangula 3 evm.TU.Scaffold_2_RagTag.56, evm.TU.Scaffold_6_RagTag.2160 ...
evm.TU.Scaffold_7_RagTag.397
Rhizophoraceae Carallia pectinifolia 4 nbisL1-mrna-16973, nbisL1-mrna-18877, nbisL1-mrna-5149 ...
nbisL1-mrna-5215
Rhizophoraceae Ceriops tagal 3 nbisL1-mrna-10976, nbisL1-mrna-13387, nbisL1-mrna-14891
Rhizophoraceae Ceriops zippeliana 3 nbisL1-mrna-11670, nbisL1-mrna-6901, nbisL1-mrna-9319
Rhizophoraceae Kandelia candel 3 evm.TU.utg000002l.814, evm.TU.utg000009l.1203 ...
evm.TU.utg000011l.1327
Rhizophoraceae Kandelia obovata 3 Maker00005810, Maker00007184, Maker00010669
Rhizophoraceae Rhizophora apiculata 3 nbisL1-mrna-14102, nbisL1-mrna-15702, nbisL1-mrna-8775
Rhizophoraceae Rhizophora mangle 4 nbisL1-mrna-20092, nbisL1-mrna-21186, nbisL1-mrna-24112 ...
nbisL1-mrna-2955
Salicaceae Populus euphratica 5 populus_peu08660, populus_peu14066, populus_peu15423 ...
populus_peu33064, populus_peu36692
Solanaceae Lycium barbarum 5 gene-LOC132599359, gene-LOC132604167, gene-LOC132606664 ...
gene-LOC132622086, gene-LOC132624902
Solanaceae Solanum chilense 4 SOLCI000015600, SOLCI003460400, SOLCI003721200 ...
SOLCI003818900
Solanaceae Solanum pennellii 4 gene-LOC107002556, gene-LOC107006677, gene-LOC107008519 ...
gene-LOC107011222
Tamaricaceae Reaumuria soongarica 3 STRG.20750_chr08_-, gene_2340, gene_7950
Tamaricaceae Tamarix chinensis 3 TC04G1115, TC10G0180, TC12G0808
Zosteraceae Zostera marina 2 Zosma05g23820.v3.1, Zosma06g11590.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.