Basic Information
Locus ID:
Ag7G01478
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
14-3-3-like protein 16R
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 179605659 | 179607915 | - | Ag7G01478 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.69 | 28,625.79 Da | 41.55 | 85.84 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00244 | 14-3-3 protein | 10 | 235 | 1.3E-104 | IPR023410 |
| SUPERFAMILY | SSF48445 | 14-3-3 protein | 1 | 237 | 2.35E-104 | IPR036815 |
| Gene3D | G3DSA:1.20.190.20 | - | 1 | 248 | 1.7E-132 | IPR036815 |
| SMART | SM00101 | 1433_4 | 4 | 248 | 5.2E-198 | IPR023410 |
| PIRSF | PIRSF000868 | 14-3-3 | 1 | 247 | 2.3E-117 | IPR000308 |
| ProSitePatterns | PS00796 | 14-3-3 proteins signature 1. | 45 | 55 | - | IPR023409 |
| ProSitePatterns | PS00797 | 14-3-3 proteins signature 2. | 217 | 236 | - | IPR023409 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 181 | 207 | 4.2E-88 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 154 | 180 | 4.2E-88 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 119 | 141 | 4.2E-88 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 39 | 68 | 4.2E-88 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 208 | 237 | 4.2E-88 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 88 | 112 | 4.2E-88 | IPR000308 |
| Coils | Coil | Coil | 145 | 165 | - | - |
| Coils | Coil | Coil | 10 | 30 | - | - |
KEGG Pathway
KO Term:
Pathway:
ko04011 (MAPK signaling pathway - yeast)
map04011 (MAPK signaling pathway - yeast)
ko04110 (Cell cycle)
map04110 (Cell cycle)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78300.1 | general regulatory factor 2. G-box binding factor GF14 omega encoding a 14-3-3 protein | 0 |
| RefSeq | XP_017230039.1 | PREDICTED: 14-3-3-like protein [Daucus carota subsp. sativus] | 0 |
| P93784 | 14-3-3-like protein 16R OS=Solanum tuberosum OX=4113 PE=2 SV=1 | 0 | |
| TrEMBL | A0A166I732 | 14_3_3 domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_003472 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| PRJNA723697 | SRX10692252 | 112.683617 | Shengqin NO.2 | seed | S1-1 | S1-1 | initial formation stage (S1) |
| PRJNA723697 | SRX10692254 | 95.184288 | Shengqin NO.2 | seed | S1-3 | S1-3 | initial formation stage (S1) |
| PRJNA723697 | SRX10692255 | 101.874313 | Shengqin NO.2 | seed | S3-1 | S3-1 | middle development stage (S3) |
| PRJNA723697 | SRX10692256 | 114.582603 | Shengqin NO.2 | seed | S3-2 | S3-2 | middle development stage (S3) |
| PRJNA723697 | SRX10692257 | 113.76033 | Shengqin NO.2 | seed | S3-3 | S3-3 | middle development stage (S3) |
| PRJNA723697 | SRX10692258 | 78.040115 | Shengqin NO.2 | seed | S5-1 | S5-1 | maturation stage (S5) |
| PRJNA723697 | SRX10692259 | 77.124825 | Shengqin NO.2 | seed | S5-2 | S5-2 | maturation stage (S5) |
| PRJNA723697 | SRX10692260 | 42.773533 | Shengqin NO.2 | seed | S5-3 | S5-3 | maturation stage (S5) |
| PRJNA884666 | SRX17729272 | 462.056305 | celery | anther | W99A-r1 | male sterile line | |
| PRJNA884666 | SRX17729273 | 451.41806 | celery | anther | W99A-r2 | male sterile line | |
| PRJNA884666 | SRX17729274 | 465.977722 | celery | anther | W99A-r3 | male sterile line | |
| PRJNA884666 | SRX17729275 | 400.829498 | celery | anther | W99B-r1 | maintainer line | |
| PRJNA884666 | SRX17729276 | 356.969666 | celery | anther | W99B-r2 | maintainer line | |
| PRJNA884666 | SRX17729277 | 421.850159 | celery | anther | W99B-r3 | maintainer line | |
| PRJNA884180 | SRX17743889 | 406.469299 | var. secalinum Yablochny | collenchyma | Col_S1_rep1-1 | ||
| PRJNA884180 | SRX17748056 | 455.315247 | var. secalinum Yablochny | collenchyma | Col_S1_rep3 | biological replicate 3 | |
| PRJNA884180 | SRX17748057 | 496.541077 | var. secalinum Yablochny | collenchyma | Col_S1_rep4 | biological replicate 4 | |
| PRJNA884180 | SRX17748678 | 326.298492 | var. secalinum Yablochny | parenchyma | Par_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17748679 | 370.716797 | var. secalinum Yablochny | parenchyma | Par_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17748680 | 325.348846 | var. secalinum Yablochny | parenchyma | Par_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17748681 | 300.703796 | var. secalinum Yablochny | parenchyma | Par_S1_rep4 | Biological replicate 4 | |
| PRJNA884180 | SRX17748898 | 521.733215 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17748899 | 557.098877 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17748900 | 554.340393 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17748901 | 489.260071 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep4 | Biological replicate 4 | |
| PRJNA884180 | SRX17749129 | 382.114624 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17749130 | 397.286865 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17749131 | 302.648376 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17749132 | 396.320862 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep4 | Biological replicate 4 | |
| PRJNA1124269 | SRX24936411 | 142.733292 | leaf | CK1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936412 | 132.966278 | leaf | CK2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936413 | 135.214355 | leaf | CK3 | replicate=biological replicate3 | ||
| PRJNA1124269 | SRX24936414 | 271.429657 | leaf | D1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936415 | 302.093109 | leaf | D2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936416 | 261.516357 | leaf | D3 | replicate=biological replicate3 | ||
| PRJNA1124269 | SRX24936417 | 213.012054 | leaf | MD1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936418 | 218.739426 | leaf | MD2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936419 | 220.789673 | leaf | MD3 | replicate=biological replicate3 | ||
| PRJNA387092 | SRX2833309 | 243.030075 | shanghaihuangxin | leaf | leaves between 0.5 and 1 cm in breadth, folded; | stage 2 | |
| PRJNA387092 | SRX2833321 | 97.362709 | shanghaihuangxin | leaf | leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion | stage 5 | |
| PRJNA387092 | SRX2833323 | 69.743507 | shanghaihuangxin | leaf | leaves >3 cm, unfolded, with clearstem extension | stage 7 | |
| PRJNA543957 | SRX5879598 | 237.382385 | Zhangzhou lvqing | stem | Se3 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879599 | 322.662842 | Zhangzhou lvqing | stem | Se2 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879600 | 336.577423 | Zhangzhou lvqing | stem | Mock2 | mock | |
| PRJNA543957 | SRX5879601 | 272.462585 | Zhangzhou lvqing | stem | Mock1 | mock | |
| PRJNA543957 | SRX5879602 | 270.741913 | Zhangzhou lvqing | stem | Se1 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879603 | 346.812012 | Zhangzhou lvqing | stem | Mock3 | mock | |
| PRJNA609149 | SRX7815917 | 404.073395 | Jinnan Shiqin | flower bud | early flower bud | early flower bud | |
| PRJNA609149 | SRX7815918 | 330.402588 | Jinnan Shiqin | flower bud | middle flower bud | middle flower bud | |
| PRJNA609149 | SRX7815919 | 276.12558 | Jinnan Shiqin | flower bud | early flowering period | early flowering period |
Orthology