Basic Information
Locus ID:
Ag7G01462
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
B3 DNA binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 177271596 | 177278663 | + | Ag7G01462 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.84 | 46,344.24 Da | 35.31 | 76.51 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 6 | 80 | 7.85E-9 | IPR015300 |
| Gene3D | G3DSA:2.40.330.10 | - | 2 | 82 | 5.9E-7 | IPR015300 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 232 | 247 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 268 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 232 | 269 | - | - |
| Coils | Coil | Coil | 354 | 395 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_017233687.1 | PREDICTED: uncharacterized protein LOC108207768 [Daucus carota subsp. sativus] | 0 |
| TrEMBL | A0A6L5B6S5 | TF-B3 domain-containing protein OS=Apium graveolens OX=4045 GN=AG4045_028131 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 54 | Ag10G00036, Ag10G00367, Ag10G00397, Ag10G00497, Ag10G00882 ... |