halophFGD

Basic Information

Locus ID: Ag7G00723

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr7	46848244	46848558	+	Ag7G00723

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.25	11,643.37 Da	30.68	90.86	-0.21

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_017226493.1	PREDICTED: F-box/kelch-repeat protein At3g17530-like [Daucus carota subsp. sativus]	0
TrEMBL	A0A6L5BA39	F-box domain-containing protein OS=Apium graveolens OX=4045 GN=AG4045_010845 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	1.90459	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	1.739087	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	1.105952	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	2.204711	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	2.70171	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	2.710386	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	0.636324	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	0.574188	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	10.830722	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	5.986779	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	8.311962	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	7.549356	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	5.328963	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	6.090936	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	3.221395	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	4.221596	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	9.481317	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	2.648245	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	4.033782	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	3.397738	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	4.542235	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	6.624597	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	2.763081	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	4.70684	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	5.201703	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	4.152826	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	3.732564	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	2.94363	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	2.760378	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	2.578689		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	4.402919		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	2.062334		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	2.523485		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	2.614574		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	2.042927		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	0.456371		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	3.833789		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	2.302741		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	2.610434	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	1.426	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	0.548888	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	0.579014	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	1.585792	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	3.734894	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	2.135124	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	2.878074	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	2.507726	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	15.355515	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	15.143778	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	17.434359	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Apiaceae	Apium graveolens	13	Ag11G04885, Ag1G00830, Ag1G00923, Ag1G01144, Ag3G01205 ... Ag7G00721, Ag7G00723, Ag7G00725, Ag8G01058, Ag8G01686, Ag8G02035, AgUnG00385, AgUnG01320