halophFGD

Basic Information

Locus ID: Ag7G00721

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr7	46803328	46811505	+	Ag7G00721

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.66	30,878.62 Da	56.08	77.25	-0.27

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_017226493.1	PREDICTED: F-box/kelch-repeat protein At3g17530-like [Daucus carota subsp. sativus]	0
TrEMBL	A0A6L5BA02	Not3 domain-containing protein OS=Apium graveolens OX=4045 GN=AG4045_018920 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	0.911823	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	0.328161	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	0.392452	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	0.405713	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	0	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	0.447397	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	0.780812	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	0.249662	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	0.607134	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	1.034489	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	0.617274	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	0.824597	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	1.038583	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	1.807934	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	1.540534	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	0.532429	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	0.939954	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	0.541695	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	0.662615	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	1.285684	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	0.637552	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	1.789654	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	1.464713	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	0.559486	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	1.362062	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	1.59764	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	0.755855	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	0.574868	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	0.34846	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	1.17084		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	0.870092		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	1.016096		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	1.216188		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	1.645518		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	0.656127		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	2.270622		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	0.685596		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	1.457787		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	0.539801	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	0.620766	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	0.255647	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	0.971949	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	0.575092	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	0.613019	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	0.855097	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	0.381255	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	0.196437	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	2.020247	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	2.23929	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	2.220826	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Apiaceae	Apium graveolens	13	Ag11G04885, Ag1G00830, Ag1G00923, Ag1G01144, Ag3G01205 ... Ag7G00721, Ag7G00723, Ag7G00725, Ag8G01058, Ag8G01686, Ag8G02035, AgUnG00385, AgUnG01320