Basic Information
Locus ID:
Ag7G00385
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
B3 DNA binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 12486175 | 12486814 | - | Ag7G00385 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.38 | 18,449.97 Da | 32.05 | 80.51 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 71 | 154 | 3.14E-8 | IPR015300 |
| Gene3D | G3DSA:2.40.330.10 | - | 51 | 155 | 8.0E-9 | IPR015300 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A6L5B972 | Nuclear shuttle protein OS=Apium graveolens OX=4045 GN=AG4045_027905 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 54 | Ag10G00036, Ag10G00367, Ag10G00397, Ag10G00497, Ag10G00882 ... |