halophFGD

Basic Information

Locus ID: Ag7G00370

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: serine threonine-protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr7	11756415	11767612	-	Ag7G00370

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.38	105,287.90 Da	36.33	86.92	-0.31

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd13999	STKc_MAP3K-like	671	917	9.40652E-124	-
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	666	917	5.2E-62	IPR001245
Pfam	PF14381	Ethylene-responsive protein kinase Le-CTR1	108	311	2.1E-73	-
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	647	916	3.78E-80	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	744	929	3.2E-58	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	658	742	8.4E-31	-
SMART	SM00220	serkin_6	665	920	2.0E-58	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	665	925	43.551815	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	784	796	-	IPR008271
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	671	692	-	IPR017441
PRINTS	PR00109	Tyrosine kinase catalytic domain signature	844	866	1.1E-11	IPR001245
PRINTS	PR00109	Tyrosine kinase catalytic domain signature	825	835	1.1E-11	IPR001245
PRINTS	PR00109	Tyrosine kinase catalytic domain signature	888	910	1.1E-11	IPR001245
PRINTS	PR00109	Tyrosine kinase catalytic domain signature	778	796	1.1E-11	IPR001245
PRINTS	PR00109	Tyrosine kinase catalytic domain signature	739	752	1.1E-11	IPR001245
MobiDBLite	mobidb-lite	consensus disorder prediction	357	379	-	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K04424 (sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G11850.1	Protein kinase superfamily protein.
RefSeq	XP_017229358.1	PREDICTED: serine/threonine-protein kinase EDR1 [Daucus carota subsp. sativus]
Swiss-Prot	Q9C9U5	Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1
TrEMBL	A0A166J3Z8	Protein kinase domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_004427 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	22.253485	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	17.458183	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	17.204981	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	19.109407	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	18.35211	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	15.50987	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	17.903749	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	15.999717	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	23.403776	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	25.728081	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	25.30032	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	22.196028	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	21.535885	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	17.344749	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	22.34992	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	22.928642	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	13.311318	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	15.054331	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	13.211236	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	17.678995	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	17.939478	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	16.282112	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	14.862859	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	15.023063	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	16.857246	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	15.270005	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	13.723161	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	12.809811	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	14.576795	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	1.518416		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	1.979636		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	1.64497		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	4.06473		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	4.50624		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	4.828042		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	2.904521		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	1.11748		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	2.268018		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	12.738111	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	11.201665	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	8.123326	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	23.633953	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	21.98712	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	23.374214	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	25.374067	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	19.532734	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	29.565002	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	12.912868	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	15.446421	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	15.532947	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	3	jg29921, jg4567, jg7922
Aizoaceae	Mesembryanthemum crystallinum	2	gene_10062, gene_13174
Amaranthaceae	Atriplex hortensis	2	Ah006031, Ah034570
Amaranthaceae	Beta vulgaris	1	BVRB_4g082460
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg16857, Sbi_jg21797, Sbi_jg22021, Sbi_jg61392
Amaranthaceae	Salicornia europaea	2	Seu_jg146, Seu_jg15949
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00008241, GOSA_00008568
Amaranthaceae	Suaeda glauca	5	Sgl24787, Sgl29936, Sgl63052, Sgl63059, Sgl67668
Amaranthaceae	Chenopodium album	6	gene:ENSEOMG00000008983, gene:ENSEOMG00000017653 ... gene:ENSEOMG00000019908, gene:ENSEOMG00000029607, gene:ENSEOMG00000041006, gene:ENSEOMG00000050018
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.2AG0014410, CQ.Regalona.r1.2BG0016370 ... CQ.Regalona.r1.4AG0010010, CQ.Regalona.r1.4BG0010180
Anacardiaceae	Pistacia vera	2	pistato.v30091870, pistato.v30254600
Apiaceae	Apium graveolens	2	Ag6G02946, Ag7G00370
Arecaceae	Cocos nucifera	4	COCNU_02G000880, COCNU_03G001040, COCNU_03G001050 ... scaffold038440G000010
Arecaceae	Phoenix dactylifera	3	gene-LOC103709593, gene-LOC103712318, gene-LOC103724347
Asparagaceae	Asparagus officinalis	2	AsparagusV1_01.2378.V1.1, AsparagusV1_08.1899.V1.1
Asteraceae	Flaveria trinervia	3	Ftri14G33404, Ftri18G19739, Ftri3G02566
Brassicaceae	Arabidopsis thaliana	2	AT1G08720.1, AT5G11850.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10006727m.g.v1.0, Thhalv10012636m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp1g07370.v2.2, Sp6g31750.v2.2
Brassicaceae	Brassica nigra	4	BniB02g004410.2N, BniB05g025770.2N, BniB06g038990.2N ... BniB08g005480.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq03G2260, Ceq06G2337
Casuarinaceae	Casuarina glauca	2	Cgl03G2396, Cgl06G2454
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno09g05260, gene.Cymno12g01150
Dunaliellaceae	Dunaliella salina	1	Dusal.0140s00004.v1.0
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate03g04260
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-12576
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG03.2315, evm.TU.LG07.901
Plantaginaceae	Plantago ovata	2	Pov_00013509, Pov_00035876
Plumbaginaceae	Limonium bicolor	4	Lb1G05130, Lb1G06902, Lb6G31450, Lb6G31451
Poaceae	Echinochloa crus-galli	10	AH01.1927, AH01.4909, AH07.876, BH01.2312, BH01.4841 ... BH01.5154, BH04.1157, BH07.1003, CH01.2418, CH07.755
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_2AG0106550, gene-QOZ80_2BG0160060 ... gene-QOZ80_3AG0234590, gene-QOZ80_3BG0293530
Poaceae	Hordeum vulgare	3	HORVU.MOREX.r3.1HG0037210.1, HORVU.MOREX.r3.4HG0401890.1 ... HORVU.MOREX.r3.6HG0579960.1
Poaceae	Lolium multiflorum	3	gene-QYE76_021603, gene-QYE76_021703, gene-QYE76_070601
Poaceae	Oryza coarctata	5	Oco03G005780, Oco04G005990, Oco05G003450, Oco06G003540 ... Oco19G004640
Poaceae	Oryza sativa	3	LOC_Os02g12810.1, LOC_Os03g06410.1, LOC_Os10g29540.1
Poaceae	Paspalum vaginatum	3	gene-BS78_01G228200, gene-BS78_01G474100 ... gene-BS78_04G089600
Poaceae	Puccinellia tenuiflora	3	Pt_Chr0101103, Pt_Chr0101206, Pt_Chr0605392
Poaceae	Sporobolus alterniflorus	8	Chr01G036810, Chr04G003640, Chr04G004000, Chr05G005340 ... Chr07G007520, Chr09G009630, Chr12G002690, Chr20G007760
Poaceae	Thinopyrum elongatum	2	Tel1E01G255000, Tel4E01G463500
Poaceae	Triticum dicoccoides	6	gene_TRIDC1AG019560, gene_TRIDC1BG025030 ... gene_TRIDC4AG004070, gene_TRIDC4BG047650, gene_TRIDC6AG027120, gene_TRIDC6BG033330
Poaceae	Triticum aestivum	9	TraesCS1A02G131600.1, TraesCS1B02G154400.1 ... TraesCS1D02G136400.2, TraesCS4A02G029800.1, TraesCS4B02G276200.1, TraesCS4D02G274400.2, TraesCS6A02G186100.1, TraesCS6B02G215100.2, TraesCS6D02G173100.2
Poaceae	Zea mays	4	Zm00001eb004500_P001, Zm00001eb205140_P002 ... Zm00001eb392900_P003, Zm00001eb403280_P001
Poaceae	Zoysia japonica	2	nbis-gene-2849, nbis-gene-4428
Poaceae	Zoysia macrostachya	3	Zma_g15467, Zma_g2028, Zma_g4375
Portulacaceae	Portulaca oleracea	4	evm.TU.LG07.773, evm.TU.LG15.156, evm.TU.LG16.1234 ... evm.TU.LG20.1264
Posidoniaceae	Posidonia oceanica	1	gene.Posoc04g12640
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_10_RagTag.719, evm.TU.Scaffold_1_RagTag.215
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-13775, nbisL1-mrna-3391, nbisL1-mrna-3392 ... nbisL1-mrna-8004
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-18487, nbisL1-mrna-8870
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-5268, nbisL1-mrna-5269, nbisL1-mrna-8966
Rhizophoraceae	Kandelia candel	2	evm.TU.utg000012l.148, evm.TU.utg000033l.502
Rhizophoraceae	Kandelia obovata	2	Maker00011256, Maker00014533
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-3884, nbisL1-mrna-7812
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-197, nbisL1-mrna-8000
Salicaceae	Populus euphratica	6	populus_peu05029, populus_peu05030, populus_peu12660 ... populus_peu13524, populus_peu15854, populus_peu15855
Solanaceae	Lycium barbarum	2	gene-LOC132635897, gene-LOC132645235
Solanaceae	Solanum chilense	1	SOLCI006483700
Solanaceae	Solanum pennellii	2	gene-LOC107005697, gene-LOC107028965
Tamaricaceae	Reaumuria soongarica	4	STRG.24359_chr08_+, gene_13391, gene_16994, gene_17202
Tamaricaceae	Tamarix chinensis	4	TC02G0280, TC05G2306, TC06G0825, TC11G2057
Zosteraceae	Zostera marina	1	Zosma03g32940.v3.1