halophFGD

Basic Information

Locus ID: Ag7G00282

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Short Name: MGD1

Description: Monogalactosyldiacylglycerol synthase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr7	8235333	8240540	-	Ag7G00282

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.83	57,303.58 Da	35.11	90.71	-0.05

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd17507	GT28_Beta-DGS-like	133	510	1.83144E-138	-
Pfam	PF04101	Glycosyltransferase family 28 C-terminal domain	371	437	5.8E-9	IPR007235
Pfam	PF06925	Monogalactosyldiacylglycerol (MGDG) synthase	144	312	9.1E-60	IPR009695
SUPERFAMILY	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase	131	508	2.51E-26	-
Gene3D	G3DSA:3.40.50.2000	Glycogen Phosphorylase B;	321	493	3.3E-28	-

Gene Ontology

Biological Process:

GO:0009247 (glycolipid biosynthetic process)

Molecular Function:

GO:0016758 (hexosyltransferase activity)

KEGG Pathway

KO Term:

K03715 (1,2-diacylglycerol 3-beta-galactosyltransferase [EC:2.4.1.46])

Pathway:

ko00561 (Glycerolipid metabolism) map00561 (Glycerolipid metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways)

Reaction:

R02691 (UDP-alpha-D-galactose + 1,2-Diacyl-sn-glycerol <=> UDP + 1,2-Diacyl-3-beta-D-galactosyl-sn-glycerol)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G31780.2	monogalactosyl diacylglycerol synthase 1. Encodes an A-type monogalactosyldiacylglycerol (MGDG) synthase. It represents the isoform responsible for the bulk of MGDG synthesis in Arabidopsis.
RefSeq	XP_017232271.1	PREDICTED: monogalactosyldiacylglycerol synthase, chloroplastic-like [Daucus carota subsp. sativus]
Swiss-Prot	Q9SM44	Monogalactosyldiacylglycerol synthase, chloroplastic OS=Spinacia oleracea OX=3562 GN=MGD A PE=1 SV=1
TrEMBL	A0A166J6V2	monogalactosyldiacylglycerol synthase OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_004513 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	4.0965	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	5.041886	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	3.766364	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	4.100127	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	4.113605	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	3.849756	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	3.608533	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	4.1216	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	15.230364	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	13.653988	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	15.008929	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	17.758018	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	17.636768	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	17.47995	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	12.067686	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	13.236671	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	12.003268	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	12.011808	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	14.450464	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	10.931601	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	13.195302	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	10.314035	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	11.851972	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	10.619609	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	11.752266	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	17.744749	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	15.27783	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	12.415302	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	14.944769	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	9.59635		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	20.435707		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	18.443872		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	9.601806		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	8.782062		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	7.168592		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	6.336439		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	5.864064		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	5.031981		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	15.075403	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	15.188534	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	17.153101	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	10.401861	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	6.951458	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	8.424844	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	8.050825	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	13.726691	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	10.514851	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	12.092688	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	10.982225	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	12.324903	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	3	jg23749, jg31605, jg33030
Aizoaceae	Mesembryanthemum crystallinum	2	gene_10596, gene_25105
Amaranthaceae	Atriplex hortensis	2	Ah014261, Ah031794
Amaranthaceae	Beta vulgaris	2	BVRB_2g044370, BVRB_8g193150
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg19302, Sbi_jg25553, Sbi_jg43868, Sbi_jg9374
Amaranthaceae	Salicornia europaea	2	Seu_jg18052, Seu_jg19233
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00014590
Amaranthaceae	Suaeda glauca	3	Sgl41922, Sgl65597, Sgl69901
Amaranthaceae	Chenopodium album	6	gene:ENSEOMG00000011067, gene:ENSEOMG00000013761 ... gene:ENSEOMG00000020844, gene:ENSEOMG00000033081, gene:ENSEOMG00000047430, gene:ENSEOMG00000048866
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.2AG0001110, CQ.Regalona.r1.2BG0002160 ... CQ.Regalona.r1.8AG0022710, CQ.Regalona.r1.8BG0019700
Anacardiaceae	Pistacia vera	2	pistato.v30251220, pistato.v30261690
Apiaceae	Apium graveolens	3	Ag3G02742, Ag7G00282, Ag9G02663
Arecaceae	Cocos nucifera	6	COCNU_01G004120, COCNU_01G018090, COCNU_11G000580 ... COCNU_11G008010, COCNU_11G012300, contig69276588G000010
Arecaceae	Phoenix dactylifera	4	gene-LOC103706476, gene-LOC103707463, gene-LOC103710116 ... gene-LOC103715894
Asparagaceae	Asparagus officinalis	3	AsparagusV1_01.3433.V1.1, AsparagusV1_05.3299.V1.1 ... AsparagusV1_08.1573.V1.1
Asteraceae	Flaveria trinervia	4	Ftri14G06549, Ftri14G06847, Ftri7G06831, Ftri7G20006
Brassicaceae	Arabidopsis thaliana	3	AT2G11810.1, AT4G31780.2, AT5G20410.1
Brassicaceae	Eutrema salsugineum	3	Thhalv10013431m.g.v1.0, Thhalv10022676m.g.v1.0 ... Thhalv10024883m.g.v1.0
Brassicaceae	Schrenkiella parvula	4	Sp3g26310.v2.2, Sp4g03920.v2.2, Sp6g24010.v2.2 ... Sp7g29570.v2.2
Brassicaceae	Brassica nigra	4	BniB02g085520.2N, BniB05g006220.2N, BniB05g043040.2N ... BniB06g037030.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq04G2481, Ceq06G1409
Casuarinaceae	Casuarina glauca	2	Cgl04G2707, Cgl06G1471
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno01g07360, gene.Cymno13g01840
Dunaliellaceae	Dunaliella salina	1	Dusal.0007s00001.v1.0
Hydrocharitaceae	Thalassia testudinum	4	gene.Thate01g18330, gene.Thate02g06750, gene.Thate05g06060 ... gene.Thate06g21600
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-68
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG07.1552, evm.TU.LG07.604
Plantaginaceae	Plantago ovata	2	Pov_00001111, Pov_00028760
Plumbaginaceae	Limonium bicolor	2	Lb1G00027, Lb1G03804
Poaceae	Echinochloa crus-galli	9	AH03.1969, AH07.3815, AH08.1171, BH03.2434, BH07.3638 ... BH08.1140, CH03.2300, CH07.3710, CH08.1259
Poaceae	Eleusine coracana subsp. coracana	6	gene-QOZ80_2AG0149370, gene-QOZ80_2BG0204800 ... gene-QOZ80_5AG0373780, gene-QOZ80_5BG0422480, gene-QOZ80_6AG0535610, gene-QOZ80_6BG0489070
Poaceae	Hordeum vulgare	3	HORVU.MOREX.r3.4HG0346410.1, HORVU.MOREX.r3.5HG0482570.1 ... HORVU.MOREX.r3.6HG0626070.1
Poaceae	Lolium multiflorum	5	gene-QYE76_005303, gene-QYE76_026495, gene-QYE76_038148 ... gene-QYE76_038163, gene-QYE76_038166
Poaceae	Oryza coarctata	4	Oco03G024520, Oco04G024980, Oco17G005240, Oco18G005260
Poaceae	Oryza sativa	3	LOC_Os02g55910.1, LOC_Os08g20420.1, LOC_Os09g25580.1
Poaceae	Paspalum vaginatum	3	gene-BS78_02G187000, gene-BS78_04G309200 ... gene-BS78_07G115200
Poaceae	Puccinellia tenuiflora	4	Pt_Chr0202038, Pt_Chr0206175, Pt_Chr0206210, Pt_Chr0705311
Poaceae	Sporobolus alterniflorus	9	Chr06G000300, Chr09G017390, Chr0G009210, Chr0G013010 ... Chr0G032850, Chr13G001590, Chr14G014230, Chr15G001510, Chr21G013300
Poaceae	Thinopyrum elongatum	3	Tel4E01G163200, Tel5E01G363200, Tel6E01G657400
Poaceae	Triticum dicoccoides	6	gene_TRIDC4AG033930, gene_TRIDC4BG015940 ... gene_TRIDC5AG035560, gene_TRIDC5BG037430, gene_TRIDC6AG055030, gene_TRIDC6BG064430
Poaceae	Triticum aestivum	9	TraesCS4A02G212800.1, TraesCS4B02G103000.2 ... TraesCS4D02G099600.1, TraesCS5A02G221800.1, TraesCS5B02G220600.1, TraesCS5D02G229600.1, TraesCS6A02G368700.1, TraesCS6B02G404700.1, TraesCS6D02G352200.1
Poaceae	Zea mays	3	Zm00001eb034810_P001, Zm00001eb258130_P001 ... Zm00001eb313310_P002
Poaceae	Zoysia japonica	4	nbis-gene-20075, nbis-gene-30784, nbis-gene-39886 ... nbis-gene-49414
Poaceae	Zoysia macrostachya	4	Zma_g17352, Zma_g23858, Zma_g30342, Zma_g32390
Portulacaceae	Portulaca oleracea	4	evm.TU.LG16.1603, evm.TU.LG18.344, evm.TU.LG26.65 ... evm.TU.LG26.695
Posidoniaceae	Posidonia oceanica	2	gene.Posoc03g13470, gene.Posoc10g04150
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_10_RagTag.86, evm.TU.Scaffold_10_RagTag.922 ... evm.TU.Scaffold_4_RagTag.2275
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-12905, nbisL1-mrna-13556, nbisL1-mrna-25197
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-10807, nbisL1-mrna-3160, nbisL1-mrna-6622
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-16522, nbisL1-mrna-5013, nbisL1-mrna-9170
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000004l.221, evm.TU.utg000008l.1328 ... evm.TU.utg000033l.57
Rhizophoraceae	Kandelia obovata	3	Maker00001556, Maker00004235, Maker00014595
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-16718, nbisL1-mrna-1855, nbisL1-mrna-3718
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-14485, nbisL1-mrna-22296
Salicaceae	Populus euphratica	4	populus_peu04664, populus_peu05699, populus_peu11082 ... populus_peu13023
Solanaceae	Lycium barbarum	3	gene-LOC132603111, gene-LOC132609443, gene-LOC132636984
Solanaceae	Solanum chilense	3	SOLCI001249000, SOLCI003627200, SOLCI007528900
Solanaceae	Solanum pennellii	3	gene-LOC107007576, gene-LOC107026350, gene-LOC107028612
Tamaricaceae	Reaumuria soongarica	2	STRG.12240_chr02_-, STRG.1317_chr01_+
Tamaricaceae	Tamarix chinensis	2	TC01G1019, TC10G1184
Zosteraceae	Zostera marina	2	Zosma03g19330.v3.1, Zosma05g19150.v3.1