halophFGD

Basic Information

Locus ID: Ag7G00148

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: BTB POZ domain-containing protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr7	4377269	4378981	-	Ag7G00148

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.28	51,057.27 Da	38.96	80.53	-0.17

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd18316	BTB_POZ_KCTD-like	26	101	1.10753E-19	-
Pfam	PF02214	BTB/POZ domain	26	108	1.9E-12	IPR003131
SUPERFAMILY	SSF50978	WD40 repeat-like	124	371	1.71E-11	IPR036322
SUPERFAMILY	SSF54695	POZ domain	24	107	6.67E-15	IPR011333
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	14	119	1.4E-18	IPR011333
Gene3D	G3DSA:2.130.10.10	-	150	464	1.0E-7	IPR015943
SMART	SM00225	BTB_4	24	118	2.1E-6	IPR000210

Gene Ontology

Biological Process:

GO:0051260 (protein homooligomerization)

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K21915 (BTB/POZ domain-containing protein KCTD3)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G41330.1	BTB/POZ domain with WD40/YVTN repeat-like protein.
RefSeq	XP_017233845.1	PREDICTED: BTB/POZ domain-containing protein At5g41330-like [Daucus carota subsp. sativus]
Swiss-Prot	Q9FN67	BTB/POZ domain-containing protein At5g41330 OS=Arabidopsis thaliana OX=3702 GN=At5g41330 PE=2 SV=1
TrEMBL	A0A166JAJ9	BTB domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_004622 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	1.844566	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	1.992999	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	1.284118	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	1.621053	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	1.17315	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	1.096793	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	1.737274	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	0.738476	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	16.960867	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	7.417154	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	13.440851	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	3.12213	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	4.650904	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	1.930666	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	4.278652	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	8.08563	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	0.107683	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	17.90996	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	10.526696	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	33.465359	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	38.426388	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	2.751404	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	1.086812	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	2.644614	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	6.886747	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	0.385636	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	0.442927	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	0.959163	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	0.255907	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	1.903637		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	1.325555		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	1.604817		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	6.111441		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	4.05565		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	21.75486		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	2.275841		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	1.920748		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	2.541171		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	0.386865	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	3.874911	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	2.737857	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	74.393845	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	90.843361	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	32.423023	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	6.385315	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	44.886677	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	14.314643	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	15.13522	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	3.268885	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	3.742746	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	2	jg14794, jg23483
Aizoaceae	Mesembryanthemum crystallinum	2	gene_14732, gene_24901
Amaranthaceae	Atriplex hortensis	2	Ah004613, Ah030753
Amaranthaceae	Beta vulgaris	2	BVRB_5g100390, BVRB_6g145370
Amaranthaceae	Salicornia bigelovii	5	Sbi_jg12309, Sbi_jg23884, Sbi_jg26686, Sbi_jg33878 ... Sbi_jg7708
Amaranthaceae	Salicornia europaea	2	Seu_jg12309, Seu_jg15198
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00001173, GOSA_00002153
Amaranthaceae	Suaeda glauca	6	Sgl52019, Sgl52043, Sgl54203, Sgl57322, Sgl59512, Sgl59534
Amaranthaceae	Chenopodium album	7	gene:ENSEOMG00000000586, gene:ENSEOMG00000002728 ... gene:ENSEOMG00000005628, gene:ENSEOMG00000021675, gene:ENSEOMG00000021971, gene:ENSEOMG00000024681, gene:ENSEOMG00000025747
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.5AG0007260, CQ.Regalona.r1.5BG0007540 ... CQ.Regalona.r1.6AG0009990, CQ.Regalona.r1.6BG0011450
Anacardiaceae	Pistacia vera	2	pistato.v30135890, pistato.v30285630
Apiaceae	Apium graveolens	5	Ag6G00689, Ag6G01819, Ag7G00148, Ag7G01844, Ag8G00106
Arecaceae	Cocos nucifera	3	COCNU_02G010650, COCNU_04G000480, COCNU_10G007440
Arecaceae	Phoenix dactylifera	3	gene-LOC103704046, gene-LOC103710355, gene-LOC103713501
Asparagaceae	Asparagus officinalis	1	AsparagusV1_04.123.V1.1
Asteraceae	Flaveria trinervia	4	Ftri13G12329, Ftri14G02563, Ftri16G14214, Ftri9G01255
Brassicaceae	Arabidopsis thaliana	2	AT3G09030.1, AT5G41330.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10020689m.g.v1.0, Thhalv10027773m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp3g07450.v2.2, Sp7g00610.v2.2, SpUn0010_0090.v2.2
Brassicaceae	Brassica nigra	4	BniB01g016370.2N, BniB01g025030.2N, BniB01g055580.2N ... BniB02g069950.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq03G0315, Ceq08G1040
Casuarinaceae	Casuarina glauca	2	Cgl03G0393, Cgl08G1065
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno04g17000, gene.Cymno14g02710
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate03g08190, gene.Thate07g13180
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-3706
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG01.1051, evm.TU.LG10.1424
Plantaginaceae	Plantago ovata	2	Pov_00006487, Pov_00028313
Plumbaginaceae	Limonium bicolor	2	Lb2G09285, Lb3G17253
Poaceae	Echinochloa crus-galli	4	AH01.4249, AH03.923, BH03.1061, CH03.1214
Poaceae	Eleusine coracana subsp. coracana	3	gene-QOZ80_3AG0242140, gene-QOZ80_3BG0285990 ... gene-QOZ80_7AG0564550
Poaceae	Hordeum vulgare	2	HORVU.MOREX.r3.4HG0389660.1.CDS1 ... HORVU.MOREX.r3.7HG0666260.1
Poaceae	Lolium multiflorum	2	gene-QYE76_009767, gene-QYE76_069112
Poaceae	Oryza coarctata	4	Oco05G008960, Oco06G009330, Oco13G005710, Oco14G006450
Poaceae	Oryza sativa	2	LOC_Os03g15800.1, LOC_Os07g23720.1
Poaceae	Paspalum vaginatum	2	gene-BS78_01G407600, gene-BS78_02G085600
Poaceae	Sporobolus alterniflorus	4	Chr01G030480, Chr12G009110, Chr24G005720, Chr28G005810
Poaceae	Thinopyrum elongatum	2	Tel4E01G375700, Tel7E01G343500
Poaceae	Triticum dicoccoides	6	gene_TRIDC4AG012280, gene_TRIDC4BG038160 ... gene_TRIDC7AG023080, gene_TRIDC7AG023140, gene_TRIDC7BG013490, gene_TRIDC7BG013680
Poaceae	Triticum aestivum	7	TraesCS4A02G090000.1.cds1, TraesCS4B02G214200.1.cds1 ... TraesCS4D02G214900.1.cds1, TraesCS7A02G185900.1.cds1, TraesCS7B02G090400.1, TraesCS7D02G186800.1.cds1, TraesCS7D02G187700.1
Poaceae	Zea mays	4	Zm00001eb203610_P001, Zm00001eb305940_P001 ... Zm00001eb371450_P001, Zm00001eb398010_P001
Poaceae	Zoysia japonica	2	nbis-gene-3810, nbis-gene-43170
Poaceae	Zoysia macrostachya	2	Zma_g3970, Zma_g5041
Portulacaceae	Portulaca oleracea	4	evm.TU.LG04.3096, evm.TU.LG13.1466, evm.TU.LG16.473 ... evm.TU.LG21.1129
Posidoniaceae	Posidonia oceanica	5	gene.Posoc01g09500, gene.Posoc02g00170, gene.Posoc03g14950 ... gene.Posoc06g03730, gene.Posoc06g06340
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_16_RagTag.165, evm.TU.Scaffold_3_RagTag.545
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-1419, nbisL1-mrna-18221, nbisL1-mrna-22404
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-10293, nbisL1-mrna-11629, nbisL1-mrna-21368
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-20332, nbisL1-mrna-6264, nbisL1-mrna-8539
Rhizophoraceae	Kandelia candel	3	add.evm.TU.utg000007l.154, add.evm.TU.utg000019l.372 ... add.evm.TU.utg000022l.220
Rhizophoraceae	Kandelia obovata	3	Maker00012821, Maker00014259, Maker00018378
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-18160, nbisL1-mrna-19298, nbisL1-mrna-23214
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-10911, nbisL1-mrna-2032, nbisL1-mrna-6695
Salicaceae	Populus euphratica	3	populus_peu03580, populus_peu25506, populus_peu34422
Solanaceae	Lycium barbarum	3	gene-LOC132609903, gene-LOC132630718, gene-LOC132634917
Solanaceae	Solanum chilense	3	SOLCI002360600, SOLCI002556400, SOLCI003703400
Solanaceae	Solanum pennellii	3	gene-LOC107026727, gene-LOC107026814, gene-LOC107031122
Tamaricaceae	Reaumuria soongarica	2	STRG.23444_chr05_+, STRG.3192_chr01_-
Tamaricaceae	Tamarix chinensis	5	TC01G1661, TC01G4266, TC04G0614, TC05G1903, TC07G0308
Zosteraceae	Zostera marina	2	Zosma03g32410.v3.1, Zosma05g27430.v3.1