halophFGD

Basic Information

Locus ID: Ag6G01819

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: BTB POZ domain-containing protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr6	124109883	124111702	+	Ag6G01819

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.14	51,754.05 Da	41.59	83.34	-0.19

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd18316	BTB_POZ_KCTD-like	27	104	6.02534E-20	-
Pfam	PF02214	BTB/POZ domain	28	112	9.1E-13	IPR003131
SUPERFAMILY	SSF54695	POZ domain	24	112	1.35E-15	IPR011333
SUPERFAMILY	SSF101908	Putative isomerase YbhE	192	464	4.45E-11	-
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	15	125	1.4E-17	IPR011333
Gene3D	G3DSA:2.130.10.10	-	141	468	3.3E-8	IPR015943
SMART	SM00225	BTB_4	25	121	2.6E-5	IPR000210

Gene Ontology

Biological Process:

GO:0051260 (protein homooligomerization)

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K21915 (BTB/POZ domain-containing protein KCTD3)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G41330.1	BTB/POZ domain with WD40/YVTN repeat-like protein.
RefSeq	XP_017231306.1	PREDICTED: BTB/POZ domain-containing protein At5g41330-like isoform X1 [Daucus carota subsp. sativus]
Swiss-Prot	Q9FN67	BTB/POZ domain-containing protein At5g41330 OS=Arabidopsis thaliana OX=3702 GN=At5g41330 PE=2 SV=1
TrEMBL	A0A166FAA3	BTB domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_008375 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	4.605934	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	5.352148	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	5.90897	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	6.566436	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	6.627246	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	9.408677	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	9.807003	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	7.729889	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	10.422738	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	11.073465	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	12.101416	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	10.200366	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	8.248272	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	7.354478	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	14.000317	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	11.682978	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	17.947069	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	9.68194	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	13.989379	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	8.897836	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	10.425266	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	8.176055	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	8.787851	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	8.020662	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	9.104496	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	12.136726	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	12.842169	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	10.073311	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	13.330162	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	2.926646		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	3.393543		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	2.641374		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	6.776216		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	4.431567		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	6.542611		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	4.175719		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	3.40568		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	3.825768		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	6.065519	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	6.897864	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	3.985162	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	16.634405	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	25.205667	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	14.534744	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	14.347448	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	13.25076	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	16.795231	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	9.354265	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	9.142843	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	9.728459	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	2	jg14794, jg23483
Aizoaceae	Mesembryanthemum crystallinum	2	gene_14732, gene_24901
Amaranthaceae	Atriplex hortensis	2	Ah004613, Ah030753
Amaranthaceae	Beta vulgaris	2	BVRB_5g100390, BVRB_6g145370
Amaranthaceae	Salicornia bigelovii	5	Sbi_jg12309, Sbi_jg23884, Sbi_jg26686, Sbi_jg33878 ... Sbi_jg7708
Amaranthaceae	Salicornia europaea	2	Seu_jg12309, Seu_jg15198
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00001173, GOSA_00002153
Amaranthaceae	Suaeda glauca	6	Sgl52019, Sgl52043, Sgl54203, Sgl57322, Sgl59512, Sgl59534
Amaranthaceae	Chenopodium album	7	gene:ENSEOMG00000000586, gene:ENSEOMG00000002728 ... gene:ENSEOMG00000005628, gene:ENSEOMG00000021675, gene:ENSEOMG00000021971, gene:ENSEOMG00000024681, gene:ENSEOMG00000025747
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.5AG0007260, CQ.Regalona.r1.5BG0007540 ... CQ.Regalona.r1.6AG0009990, CQ.Regalona.r1.6BG0011450
Anacardiaceae	Pistacia vera	2	pistato.v30135890, pistato.v30285630
Apiaceae	Apium graveolens	5	Ag6G00689, Ag6G01819, Ag7G00148, Ag7G01844, Ag8G00106
Arecaceae	Cocos nucifera	3	COCNU_02G010650, COCNU_04G000480, COCNU_10G007440
Arecaceae	Phoenix dactylifera	3	gene-LOC103704046, gene-LOC103710355, gene-LOC103713501
Asparagaceae	Asparagus officinalis	1	AsparagusV1_04.123.V1.1
Asteraceae	Flaveria trinervia	4	Ftri13G12329, Ftri14G02563, Ftri16G14214, Ftri9G01255
Brassicaceae	Arabidopsis thaliana	2	AT3G09030.1, AT5G41330.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10020689m.g.v1.0, Thhalv10027773m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp3g07450.v2.2, Sp7g00610.v2.2, SpUn0010_0090.v2.2
Brassicaceae	Brassica nigra	4	BniB01g016370.2N, BniB01g025030.2N, BniB01g055580.2N ... BniB02g069950.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq03G0315, Ceq08G1040
Casuarinaceae	Casuarina glauca	2	Cgl03G0393, Cgl08G1065
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno04g17000, gene.Cymno14g02710
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate03g08190, gene.Thate07g13180
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-3706
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG01.1051, evm.TU.LG10.1424
Plantaginaceae	Plantago ovata	2	Pov_00006487, Pov_00028313
Plumbaginaceae	Limonium bicolor	2	Lb2G09285, Lb3G17253
Poaceae	Echinochloa crus-galli	4	AH01.4249, AH03.923, BH03.1061, CH03.1214
Poaceae	Eleusine coracana subsp. coracana	3	gene-QOZ80_3AG0242140, gene-QOZ80_3BG0285990 ... gene-QOZ80_7AG0564550
Poaceae	Hordeum vulgare	2	HORVU.MOREX.r3.4HG0389660.1.CDS1 ... HORVU.MOREX.r3.7HG0666260.1
Poaceae	Lolium multiflorum	2	gene-QYE76_009767, gene-QYE76_069112
Poaceae	Oryza coarctata	4	Oco05G008960, Oco06G009330, Oco13G005710, Oco14G006450
Poaceae	Oryza sativa	2	LOC_Os03g15800.1, LOC_Os07g23720.1
Poaceae	Paspalum vaginatum	2	gene-BS78_01G407600, gene-BS78_02G085600
Poaceae	Sporobolus alterniflorus	4	Chr01G030480, Chr12G009110, Chr24G005720, Chr28G005810
Poaceae	Thinopyrum elongatum	2	Tel4E01G375700, Tel7E01G343500
Poaceae	Triticum dicoccoides	6	gene_TRIDC4AG012280, gene_TRIDC4BG038160 ... gene_TRIDC7AG023080, gene_TRIDC7AG023140, gene_TRIDC7BG013490, gene_TRIDC7BG013680
Poaceae	Triticum aestivum	7	TraesCS4A02G090000.1.cds1, TraesCS4B02G214200.1.cds1 ... TraesCS4D02G214900.1.cds1, TraesCS7A02G185900.1.cds1, TraesCS7B02G090400.1, TraesCS7D02G186800.1.cds1, TraesCS7D02G187700.1
Poaceae	Zea mays	4	Zm00001eb203610_P001, Zm00001eb305940_P001 ... Zm00001eb371450_P001, Zm00001eb398010_P001
Poaceae	Zoysia japonica	2	nbis-gene-3810, nbis-gene-43170
Poaceae	Zoysia macrostachya	2	Zma_g3970, Zma_g5041
Portulacaceae	Portulaca oleracea	4	evm.TU.LG04.3096, evm.TU.LG13.1466, evm.TU.LG16.473 ... evm.TU.LG21.1129
Posidoniaceae	Posidonia oceanica	5	gene.Posoc01g09500, gene.Posoc02g00170, gene.Posoc03g14950 ... gene.Posoc06g03730, gene.Posoc06g06340
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_16_RagTag.165, evm.TU.Scaffold_3_RagTag.545
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-1419, nbisL1-mrna-18221, nbisL1-mrna-22404
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-10293, nbisL1-mrna-11629, nbisL1-mrna-21368
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-20332, nbisL1-mrna-6264, nbisL1-mrna-8539
Rhizophoraceae	Kandelia candel	3	add.evm.TU.utg000007l.154, add.evm.TU.utg000019l.372 ... add.evm.TU.utg000022l.220
Rhizophoraceae	Kandelia obovata	3	Maker00012821, Maker00014259, Maker00018378
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-18160, nbisL1-mrna-19298, nbisL1-mrna-23214
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-10911, nbisL1-mrna-2032, nbisL1-mrna-6695
Salicaceae	Populus euphratica	3	populus_peu03580, populus_peu25506, populus_peu34422
Solanaceae	Lycium barbarum	3	gene-LOC132609903, gene-LOC132630718, gene-LOC132634917
Solanaceae	Solanum chilense	3	SOLCI002360600, SOLCI002556400, SOLCI003703400
Solanaceae	Solanum pennellii	3	gene-LOC107026727, gene-LOC107026814, gene-LOC107031122
Tamaricaceae	Reaumuria soongarica	2	STRG.23444_chr05_+, STRG.3192_chr01_-
Tamaricaceae	Tamarix chinensis	5	TC01G1661, TC01G4266, TC04G0614, TC05G1903, TC07G0308
Zosteraceae	Zostera marina	2	Zosma03g32410.v3.1, Zosma05g27430.v3.1