halophFGD

Basic Information

Locus ID: Ag5G01994

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: Lipid phosphate phosphatase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr5	229123602	229128328	-	Ag5G01994

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.80	37,328.74 Da	46.57	92.39	0.09

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd03390	PAP2_containing_1_like	76	262	2.06955E-84	-
Pfam	PF01569	PAP2 superfamily	119	263	3.5E-32	IPR000326
SUPERFAMILY	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase	41	268	1.23E-39	IPR036938
Gene3D	G3DSA:1.20.144.10	Phosphatidic acid phosphatase type 2/haloperoxidase	39	270	2.6E-41	-
SMART	SM00014	acid_phosph_2	119	259	7.5E-24	IPR000326

KEGG Pathway

KO Term:

K18693 (diacylglycerol diphosphate phosphatase / phosphatidate phosphatase [EC:3.6.1.75 3.1.3.4])

Pathway:

ko00561 (Glycerolipid metabolism) map00561 (Glycerolipid metabolism) ko00564 (Glycerophospholipid metabolism) map00564 (Glycerophospholipid metabolism) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites)

Reaction:

R02239 (Phosphatidate + H2O <=> 1,2-Diacyl-sn-glycerol + Orthophosphate)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G02600.2	lipid phosphate phosphatase 3. Encodes phosphatidic acid phosphatase. Expressed during germination.
RefSeq	XP_017215738.1	PREDICTED: lipid phosphate phosphatase 1-like isoform X1 [Daucus carota subsp. sativus]
Swiss-Prot	Q8LFD1	Putative lipid phosphate phosphatase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LPP3 PE=2 SV=1
TrEMBL	A0A8S0UP52	Lipid phosphate phosphatase 2-like OS=Olea europaea subsp. europaea OX=158383 GN=OLEA9_A008167 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	32.820431	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	20.533295	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	19.837065	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	19.463182	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	20.349314	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	17.956064	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	16.753471	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	11.630953	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	140.430099	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	131.248383	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	112.10717	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	85.998917	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	87.373825	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	84.849693	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	100.384842	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	82.776939	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	60.654095	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	71.829399	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	68.314316	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	91.509201	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	74.094955	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	60.108738	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	63.740185	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	64.935364	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	62.052357	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	46.522079	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	41.620201	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	40.54401	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	48.251343	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	21.584492		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	24.302113		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	26.778606		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	51.811043		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	71.89827		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	82.749695		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	30.169582		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	33.176167		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	35.428921		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	23.865475	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	20.397169	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	17.429308	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	241.161469	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	211.165421	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	69.07206	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	53.564484	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	173.511459	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	49.03894	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	142.542725	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	156.321198	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	144.007431	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	5	jg19572, jg30824, jg34971, jg5229, jg9123
Aizoaceae	Mesembryanthemum crystallinum	2	gene_18512, gene_18513
Amaranthaceae	Atriplex hortensis	2	Ah025531, Ah025532
Amaranthaceae	Beta vulgaris	3	BVRB_4g080520, BVRB_6g143230, BVRB_6g143240
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg12868, Sbi_jg12869, Sbi_jg53001, Sbi_jg53002
Amaranthaceae	Salicornia europaea	2	Seu_jg8855, Seu_jg8856
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00024643, GOSA_00024646, GOSA_00024649
Amaranthaceae	Suaeda glauca	10	Sgl01425, Sgl06580, Sgl06587, Sgl33137, Sgl33142, Sgl33143 ... Sgl33146, Sgl33147, Sgl38378, Sgl38379
Amaranthaceae	Chenopodium album	6	gene:ENSEOMG00000000588, gene:ENSEOMG00000001049 ... gene:ENSEOMG00000001096, gene:ENSEOMG00000002370, gene:ENSEOMG00000024145, gene:ENSEOMG00000026314
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.6AG0013270, CQ.Regalona.r1.6AG0013290 ... CQ.Regalona.r1.6BG0014310, CQ.Regalona.r1.6BG0014330
Anacardiaceae	Pistacia vera	3	pistato.v30191120, pistato.v30215510, pistato.v30215520
Apiaceae	Apium graveolens	9	Ag1G01309, Ag1G01310, Ag4G00579, Ag5G01993, Ag5G01994 ... Ag6G00528, Ag6G01174, Ag8G02008, Ag8G02009
Arecaceae	Cocos nucifera	4	COCNU_02G006420, COCNU_03G008370, scaffold001198G000160 ... scaffold012341G000010
Arecaceae	Phoenix dactylifera	6	gene-LOC103701867, gene-LOC103701868, gene-LOC103708184 ... gene-LOC103709285, gene-LOC103713995, gene-LOC103713996
Asparagaceae	Asparagus officinalis	3	AsparagusV1_01.3156.V1.1, AsparagusV1_01.3248.V1.1 ... AsparagusV1_01.3249.V1.1
Asteraceae	Flaveria trinervia	6	Ftri13G32075, Ftri18G20525, Ftri1G27990, Ftri5G25520 ... Ftri6G08205, Ftri9G26412
Brassicaceae	Arabidopsis thaliana	4	AT1G15080.1, AT2G01180.1, AT3G02600.1, AT3G18220.1
Brassicaceae	Eutrema salsugineum	4	Thhalv10000962m.g.v1.0, Thhalv10008246m.g.v1.0 ... Thhalv10020998m.g.v1.0, Thhalv10021929m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp2g12640.v2.2, Sp3g01640.v2.2, Sp3g16340.v2.2
Brassicaceae	Brassica nigra	7	BniB01g046330.2N, BniB01g061210.2N, BniB03g026010.2N ... BniB04g014870.2N, BniB07g006300.2N, BniB07g034450.2N, BniB07g052140.2N
Casuarinaceae	Casuarina equisetifolia	4	Ceq03G0017, Ceq08G0689, Ceq08G0692, Ceq09G2052
Casuarinaceae	Casuarina glauca	5	Cgl08G0675, Cgl08G0678, Cgl08G0683, Cgl08G0684, Cgl09G2244
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno09g09020, gene.Cymno11g01580
Dunaliellaceae	Dunaliella salina	1	Dusal.0200s00020.v1.0
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate01g27470, gene.Thate03g00760
Nitrariaceae	Nitraria sibirica	3	evm.TU.LG02.500, evm.TU.LG03.1491, evm.TU.LG03.1492
Plantaginaceae	Plantago ovata	4	Pov_00013884, Pov_00019126, Pov_00019127, Pov_00026912
Plumbaginaceae	Limonium bicolor	5	Lb1G01244, Lb3G16460, Lb4G22763, Lb4G22764, Lb7G33329
Poaceae	Echinochloa crus-galli	21	AH02.2666, AH02.726, AH03.1502, AH05.1519, AH06.2309 ... AH08.1272, BH02.2741, BH02.2742, BH02.2926, BH02.740, BH05.1670, BH07.3942, BH07.3970, BH09.2894, CH02.3619, CH02.3790, CH02.3791, CH02.837, CH05.1890, CH06.2307, CH06.2330
Poaceae	Eleusine coracana subsp. coracana	14	gene-QOZ80_1AG0008960, gene-QOZ80_1AG0027770 ... gene-QOZ80_1AG0029530, gene-QOZ80_1BG0057700, gene-QOZ80_1BG0077940, gene-QOZ80_1BG0079650, gene-QOZ80_5AG0364390, gene-QOZ80_5BG0412410, gene-QOZ80_6AG0531670, gene-QOZ80_6AG0544890, gene-QOZ80_6BG0485400, gene-QOZ80_6BG0498390, gene-QOZ80_8AG0627530, gene-QOZ80_8BG0656080
Poaceae	Hordeum vulgare	7	HORVU.MOREX.r3.1HG0083600.1, HORVU.MOREX.r3.3HG0226810.1 ... HORVU.MOREX.r3.3HG0278190.1, HORVU.MOREX.r3.3HG0281610.1, HORVU.MOREX.r3.5HG0472700.1, HORVU.MOREX.r3.7HG0645460.1, HORVU.MOREX.r3.7HG0711190.1
Poaceae	Lolium multiflorum	9	gene-QYE76_004509, gene-QYE76_015603, gene-QYE76_015604 ... gene-QYE76_031392, gene-QYE76_032017, gene-QYE76_048664, gene-QYE76_054436, gene-QYE76_054438, gene-QYE76_054694
Poaceae	Oryza coarctata	14	Oco01G001520, Oco01G016640, Oco01G017920, Oco02G001550 ... Oco02G016810, Oco02G018090, Oco09G015980, Oco10G015800, Oco14G006690, Oco15G006960, Oco15G006970, Oco16G006730, Oco17G002320, Oco18G002230
Poaceae	Oryza sativa	7	LOC_Os01g04660.1, LOC_Os01g47580.1, LOC_Os01g49820.2 ... LOC_Os05g47660.1, LOC_Os08g27030.1, LOC_Os08g27040.1, LOC_Os09g13870.3
Poaceae	Paspalum vaginatum	6	gene-BS78_02G147200, gene-BS78_03G071000 ... gene-BS78_03G223200, gene-BS78_03G240400, gene-BS78_07G121500, gene-BS78_09G224300
Poaceae	Puccinellia tenuiflora	12	Pt_Chr0205616, Pt_Chr0205718, Pt_Chr0503718, Pt_Chr0503720 ... Pt_Chr0503803, Pt_Chr0503804, Pt_Chr0602433, Pt_Chr0605057, Pt_Chr0605059, Pt_Chr0605069, Pt_Chr0605070, Pt_Chr0702672
Poaceae	Sporobolus alterniflorus	15	Chr02G012120, Chr03G003990, Chr05G021510, Chr08G001100 ... Chr08G013170, Chr0G005570, Chr10G018000, Chr11G004620, Chr11G009980, Chr14G012510, Chr16G013110, Chr17G012550, Chr20G007940, Chr22G002190, Chr29G007300
Poaceae	Thinopyrum elongatum	10	Tel1E01G000600, Tel1E01G610000, Tel2E01G1031400 ... Tel3E01G094900, Tel3E01G410800, Tel3E01G434300, Tel5E01G305400, Tel7E01G149700, Tel7E01G582900, Tel7E01G963800
Poaceae	Triticum dicoccoides	15	gene_TRIDC1AG054880, gene_TRIDC1BG062850 ... gene_TRIDC2AG068430, gene_TRIDC3AG005910, gene_TRIDC3AG036480, gene_TRIDC3AG038920, gene_TRIDC3BG007970, gene_TRIDC3BG040670, gene_TRIDC3BG044050, gene_TRIDC4AG061990, gene_TRIDC5AG029420, gene_TRIDC5BG031010, gene_TRIDC5BG080710, gene_TRIDC7AG047590, gene_TRIDC7BG039990
Poaceae	Triticum aestivum	23	TraesCS1A02G373000.1, TraesCS1B02G393200.1 ... TraesCS1D02G379800.1, TraesCS2A02G485500.1, TraesCS3A02G052100.2, TraesCS3A02G242700.1, TraesCS3A02G260300.1, TraesCS3B02G060600.1, TraesCS3B02G270800.1, TraesCS3B02G293300.1, TraesCS3D02G051000.3, TraesCS3D02G058900.1, TraesCS3D02G242700.1, TraesCS3D02G260400.1, TraesCS4A02G417500.1, TraesCS5A02G180300.1, TraesCS5B02G178200.1, TraesCS5B02G546500.1, TraesCS5D02G184800.1, TraesCS7A02G330800.1, TraesCS7B02G241600.1, TraesCS7D02G066700.2, TraesCS7D02G339000.1
Poaceae	Zea mays	7	Zm00001eb042920_P001, Zm00001eb097940_P001 ... Zm00001eb157460_P001, Zm00001eb294840_P001, Zm00001eb309560_P001, Zm00001eb335600_P001, Zm00001eb360740_P004
Poaceae	Zoysia japonica	10	nbis-gene-12629, nbis-gene-13758, nbis-gene-26016 ... nbis-gene-35518, nbis-gene-41026, nbis-gene-43246, nbis-gene-49291, nbis-gene-51730, nbis-gene-55795, nbis-gene-6995
Poaceae	Zoysia macrostachya	7	Zma_g10827, Zma_g22858, Zma_g23968, Zma_g27324, Zma_g32359 ... Zma_g8469, Zma_g9937
Portulacaceae	Portulaca oleracea	7	evm.TU.LG03.1899, evm.TU.LG03.1937, evm.TU.LG09.1190 ... evm.TU.LG13.733, evm.TU.LG14.191, evm.TU.LG14.248, evm.TU.LG21.419
Posidoniaceae	Posidonia oceanica	3	gene.Posoc04g02610, gene.Posoc04g02620, gene.Posoc04g06450
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.50411.1, evm.TU.Scaffold_15_RagTag.128 ... evm.TU.Scaffold_15_RagTag.129, evm.TU.Scaffold_4_RagTag.731
Rhizophoraceae	Carallia pectinifolia	6	nbisL1-mrna-15215, nbisL1-mrna-1896, nbisL1-mrna-2046 ... nbisL1-mrna-23590, nbisL1-mrna-23591, nbisL1-mrna-28623
Rhizophoraceae	Ceriops tagal	5	nbisL1-mrna-10154, nbisL1-mrna-11586, nbisL1-mrna-18269 ... nbisL1-mrna-3017, nbisL1-mrna-4979
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-17463, nbisL1-mrna-21982
Rhizophoraceae	Kandelia candel	4	evm.TU.utg000001l.77, evm.TU.utg000001l.78 ... evm.TU.utg000008l.473, evm.TU.utg000013l.486
Rhizophoraceae	Kandelia obovata	3	Maker00004485, Maker00004601, Maker00004731
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-10878, nbisL1-mrna-11645, nbisL1-mrna-14430
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-14172, nbisL1-mrna-19226, nbisL1-mrna-2805 ... nbisL1-mrna-2806
Salicaceae	Populus euphratica	5	populus_peu07107, populus_peu09582, populus_peu21082 ... populus_peu21083, populus_peu24952
Solanaceae	Lycium barbarum	8	gene-LOC132614178, gene-LOC132623786, gene-LOC132625789 ... gene-LOC132641685, gene-LOC132641686, gene-LOC132641687, gene-LOC132641688, gene-LOC132642739
Solanaceae	Solanum chilense	4	SOLCI000359800, SOLCI002971800, SOLCI003144100 ... SOLCI003144300
Solanaceae	Solanum pennellii	6	gene-LOC107008632, gene-LOC107016565, gene-LOC107017253 ... gene-LOC107018573, gene-LOC107019076, gene-LOC107020924
Tamaricaceae	Reaumuria soongarica	4	STRG.17078_chr08_+, STRG.26092_chr11_-, gene_3731, gene_910
Tamaricaceae	Tamarix chinensis	6	TC01G2491, TC04G1328, TC04G1329, TC04G1330, TC04G1332 ... TC05G1082
Zosteraceae	Zostera marina	2	Zosma01g11230.v3.1, Zosma05g02790.v3.1