Basic Information
Locus ID:
Ag5G01646
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 178559265 | 178560681 | + | Ag5G01646 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.43 | 24,271.95 Da | 42.80 | 93.41 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 127 | 209 | 1.7E-10 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 102 | 208 | 2.25E-22 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 97 | 201 | 2.6E-29 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 126 | 217 | 11.764448 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G54820.3 | - | 0 |
| RefSeq | XP_017230889.1 | PREDICTED: serine/threonine-protein kinase CDL1-like isoform X1 [Daucus carota subsp. sativus] | 0 |
| Q9FFW5 | Proline-rich receptor-like protein kinase PERK8 OS=Arabidopsis thaliana OX=3702 GN=PERK8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A166I202 | Protein kinase domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_003317 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg20034 |
| Apiaceae | Apium graveolens | 9 | Ag11G03867, Ag3G01646, Ag3G02214, Ag5G00356, Ag5G00757 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-25418 |