HalophFGD

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Basic Information
Locus ID: Ag5G01559
Species & Taxonomic ID: Apium graveolens & 4045
Genome Assembly: GCA_009905375.1
Description: Belongs to the disease resistance NB-LRR family
Maps and Mapping Data
Chromosome Start End Strand ID
chr5 150547841 150551070 - Ag5G01559
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.77 102,148.61 Da 39.08 106.83 -0.01
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00931 NB-ARC domain 155 393 7.3E-68 IPR002182
Pfam PF13855 Leucine rich repeat 529 589 3.9E-10 IPR001611
SUPERFAMILY SSF52058 L domain-like 467 858 1.87E-41 -
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases 145 406 1.51E-50 IPR027417
Gene3D G3DSA:1.10.8.430 - 304 395 2.6E-16 IPR042197
Gene3D G3DSA:3.40.50.300 - 141 303 1.3E-30 IPR027417
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 492 869 1.8E-41 IPR032675
SMART SM00382 AAA_5 169 308 0.002 IPR003593
PRINTS PR00364 Disease resistance protein signature 340 354 2.2E-22 -
PRINTS PR00364 Disease resistance protein signature 597 613 2.2E-22 -
PRINTS PR00364 Disease resistance protein signature 246 260 2.2E-22 -
PRINTS PR00364 Disease resistance protein signature 172 187 2.2E-22 -
Coils Coil Coil 74 94 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding) GO:0043531 (ADP binding)
KEGG Pathway
KO Term:
K13459 (disease resistance protein RPS2)
Pathway:
ko04626 (Plant-pathogen interaction) map04626 (Plant-pathogen interaction)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G26090.1 NB-ARC domain-containing disease resistance protein. Encodes a plasma membrane protein with leucine-rich repeat, leucine zipper, and P loop domains that confers resistance to Pseudomonas syringae infection by interacting with the avirulence gene avrRpt2. RPS2 protein interacts directly with plasma membrane associated protein RIN4 and this interaction is disrupted by avrRpt2. 0
RefSeq XP_017252024.1 PREDICTED: disease resistance protein RPS2 [Daucus carota subsp. sativus] 0
Swiss-Prot Q42484 Disease resistance protein RPS2 OS=Arabidopsis thaliana OX=3702 GN=RPS2 PE=1 SV=1 0
TrEMBL A0A162A210 AAA domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_017175 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
PRJNA723697SRX106922522.228653Shengqin NO.2seedS1-1S1-1initial formation stage (S1)
PRJNA723697SRX106922542.110952Shengqin NO.2seedS1-3S1-3initial formation stage (S1)
PRJNA723697SRX106922552.300598Shengqin NO.2seedS3-1S3-1middle development stage (S3)
PRJNA723697SRX106922562.45039Shengqin NO.2seedS3-2S3-2middle development stage (S3)
PRJNA723697SRX106922572.906352Shengqin NO.2seedS3-3S3-3middle development stage (S3)
PRJNA723697SRX106922582.39818Shengqin NO.2seedS5-1S5-1maturation stage (S5)
PRJNA723697SRX106922592.377264Shengqin NO.2seedS5-2S5-2maturation stage (S5)
PRJNA723697SRX106922601.623681Shengqin NO.2seedS5-3S5-3maturation stage (S5)
PRJNA884666SRX177292729.970926celeryantherW99A-r1male sterile line 
PRJNA884666SRX177292739.787144celeryantherW99A-r2male sterile line 
PRJNA884666SRX1772927410.279591celeryantherW99A-r3male sterile line 
PRJNA884666SRX177292756.83608celeryantherW99B-r1maintainer line
PRJNA884666SRX177292767.196711celeryantherW99B-r2maintainer line
PRJNA884666SRX177292774.739444celeryantherW99B-r3maintainer line
PRJNA884180SRX177438894.149223var. secalinum YablochnycollenchymaCol_S1_rep1-1
PRJNA884180SRX177480565.702197var. secalinum YablochnycollenchymaCol_S1_rep3biological replicate 3
PRJNA884180SRX177480572.431292var. secalinum YablochnycollenchymaCol_S1_rep4biological replicate 4
PRJNA884180SRX1774867810.185792var. secalinum YablochnyparenchymaPar_S1_rep1Biological replicate 1
PRJNA884180SRX177486794.925959var. secalinum YablochnyparenchymaPar_S1_rep2Biological replicate 2
PRJNA884180SRX1774868013.481642var. secalinum YablochnyparenchymaPar_S1_rep3Biological replicate 3
PRJNA884180SRX1774868112.886374var. secalinum YablochnyparenchymaPar_S1_rep4Biological replicate 4
PRJNA884180SRX177488981.991573var. secalinum Yablochnyvascular bundleVas_S1_rep1Biological replicate 1
PRJNA884180SRX177488991.983907var. secalinum Yablochnyvascular bundleVas_S1_rep2Biological replicate 2
PRJNA884180SRX177489002.68563var. secalinum Yablochnyvascular bundleVas_S1_rep3Biological replicate 3
PRJNA884180SRX177489012.93246var. secalinum Yablochnyvascular bundleVas_S1_rep4Biological replicate 4
PRJNA884180SRX177491294.239966var. secalinum Yablochnypart of the celery petiole without collenchyma strandsCollenchyma-free_S1_rep1Biological replicate 1
PRJNA884180SRX177491304.21551var. secalinum Yablochnypart of the celery petiole without collenchyma strandsCollenchyma-free_S1_rep2Biological replicate 2
PRJNA884180SRX177491314.193696var. secalinum Yablochnypart of the celery petiole without collenchyma strandsCollenchyma-free_S1_rep3Biological replicate 3
PRJNA884180SRX177491324.310771var. secalinum Yablochnypart of the celery petiole without collenchyma strandsCollenchyma-free_S1_rep4Biological replicate 4
PRJNA1124269SRX249364113.661858leafCK1replicate=biological replicate1
PRJNA1124269SRX249364122.944763leafCK2replicate=biological replicate2
PRJNA1124269SRX249364134.017506leafCK3replicate=biological replicate3
PRJNA1124269SRX2493641410.687873leafD1replicate=biological replicate1
PRJNA1124269SRX249364155.679763leafD2replicate=biological replicate2
PRJNA1124269SRX2493641612.854963leafD3replicate=biological replicate3
PRJNA1124269SRX2493641716.720528leafMD1replicate=biological replicate1
PRJNA1124269SRX249364186.615445leafMD2replicate=biological replicate2
PRJNA1124269SRX249364199.604469leafMD3replicate=biological replicate3
PRJNA387092SRX28333098.314433shanghaihuangxinleafleaves between 0.5 and 1 cm in breadth, folded;stage 2
PRJNA387092SRX283332113.358305shanghaihuangxinleafleaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sionstage 5
PRJNA387092SRX28333238.003004shanghaihuangxinleafleaves >3 cm, unfolded, with clearstem extensionstage 7
PRJNA543957SRX587959819.756586Zhangzhou lvqingstemSe3100 ppm Na2SeO4
PRJNA543957SRX587959920.628246Zhangzhou lvqingstemSe2100 ppm Na2SeO4
PRJNA543957SRX587960016.923222Zhangzhou lvqingstemMock2mock
PRJNA543957SRX58796019.56852Zhangzhou lvqingstemMock1mock
PRJNA543957SRX587960216.48694Zhangzhou lvqingstemSe1100 ppm Na2SeO4
PRJNA543957SRX587960310.873652Zhangzhou lvqingstemMock3mock
PRJNA609149SRX78159174.670261Jinnan Shiqinflower budearly flower budearly flower bud
PRJNA609149SRX78159182.757405Jinnan Shiqinflower budmiddle flower budmiddle flower bud
PRJNA609149SRX78159192.691562Jinnan Shiqinflower budearly flowering periodearly flowering period
Network
🔍 Co-expression Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 40 jg13165, jg13169, jg13171, jg13172, jg13173, jg13174, jg3788 ...
jg13175, jg13177, jg13187, jg13188, jg13189, jg13190, jg13191, jg13192, jg13738, jg15399, jg15583, jg15802, jg15803, jg15832, jg15833, jg21084, jg27190, jg28308, jg29772, jg32453, jg32454, jg3791, jg39660, jg4204, jg4205, jg4207, jg4208, jg4211, jg4212, jg4214, jg4234, jg4239, jg4274
Aizoaceae Mesembryanthemum crystallinum 25 gene_103, gene_104, gene_11015, gene_12422, gene_12429 ...
gene_15218, gene_15786, gene_15787, gene_17469, gene_17470, gene_17473, gene_18471, gene_18472, gene_18473, gene_24766, gene_24767, gene_2853, gene_2856, gene_5528, gene_5532, gene_5535, gene_6646, gene_6647, gene_7424, gene_7425
Amaranthaceae Atriplex hortensis 18 Ah008233, Ah008241, Ah008242, Ah008243, Ah008254, Ah008293 ...
Ah008687, Ah008690, Ah008691, Ah008696, Ah008697, Ah008698, Ah008700, Ah017575, Ah022376, Ah022377, Ah025746, Ah028824
Amaranthaceae Beta vulgaris 19 BVRB_3g058300, BVRB_3g058340, BVRB_3g064590, BVRB_3g064600 ...
BVRB_4g087170, BVRB_4g087530, BVRB_4g087550, BVRB_4g087560, BVRB_4g087580, BVRB_4g087950, BVRB_4g088020, BVRB_4g088030, BVRB_4g088060, BVRB_5g113770, BVRB_7g168360, BVRB_7g168480, BVRB_7g168510, BVRB_7g168550, BVRB_7g168690
Amaranthaceae Salicornia bigelovii 24 Sbi_jg13897, Sbi_jg13898, Sbi_jg13899, Sbi_jg18927 ...
Sbi_jg18928, Sbi_jg18930, Sbi_jg225, Sbi_jg234, Sbi_jg236, Sbi_jg36316, Sbi_jg36318, Sbi_jg36319, Sbi_jg37380, Sbi_jg37381, Sbi_jg37383, Sbi_jg37384, Sbi_jg49997, Sbi_jg52042, Sbi_jg59028, Sbi_jg59030, Sbi_jg63598, Sbi_jg63599, Sbi_jg63601, Sbi_jg63603
Amaranthaceae Salicornia europaea 9 Seu_jg1657, Seu_jg1658, Seu_jg23287, Seu_jg23290, Seu_jg4356 ...
Seu_jg4426, Seu_jg5220, Seu_jg5221, Seu_jg9812
Amaranthaceae Suaeda aralocaspica 13 GOSA_00001445, GOSA_00002876, GOSA_00006389, GOSA_00006391 ...
GOSA_00006804, GOSA_00006956, GOSA_00011289, GOSA_00011670, GOSA_00011672, GOSA_00011676, GOSA_00012863, GOSA_00012864, GOSA_00022538
Amaranthaceae Suaeda glauca 48 Sgl01823, Sgl01824, Sgl01826, Sgl02446, Sgl02448, Sgl03410 ...
Sgl06980, Sgl06982, Sgl07599, Sgl07601, Sgl12981, Sgl18239, Sgl23007, Sgl23008, Sgl23012, Sgl23028, Sgl23030, Sgl23252, Sgl28117, Sgl28118, Sgl28122, Sgl28137, Sgl28166, Sgl28323, Sgl28411, Sgl33185, Sgl38423, Sgl43030, Sgl43031, Sgl43041, Sgl43049, Sgl43745, Sgl43746, Sgl46300, Sgl47851, Sgl47852, Sgl47861, Sgl51018, Sgl51675, Sgl56979, Sgl73502, Sgl73507, Sgl73513, Sgl73538, Sgl77029, Sgl77033, Sgl77040, Sgl77066
Amaranthaceae Chenopodium album 34 gene:ENSEOMG00000000122, gene:ENSEOMG00000002347 ...
gene:ENSEOMG00000005922, gene:ENSEOMG00000007244, gene:ENSEOMG00000007953, gene:ENSEOMG00000008026, gene:ENSEOMG00000008055, gene:ENSEOMG00000008364, gene:ENSEOMG00000008510, gene:ENSEOMG00000010903, gene:ENSEOMG00000011120, gene:ENSEOMG00000011287, gene:ENSEOMG00000012298, gene:ENSEOMG00000013580, gene:ENSEOMG00000014336, gene:ENSEOMG00000027379, gene:ENSEOMG00000029491, gene:ENSEOMG00000029510, gene:ENSEOMG00000029893, gene:ENSEOMG00000030419, gene:ENSEOMG00000031571, gene:ENSEOMG00000034407, gene:ENSEOMG00000036324, gene:ENSEOMG00000037639, gene:ENSEOMG00000040028, gene:ENSEOMG00000041079, gene:ENSEOMG00000041883, gene:ENSEOMG00000042325, gene:ENSEOMG00000042895, gene:ENSEOMG00000043300, gene:ENSEOMG00000043504, gene:ENSEOMG00000043845, gene:ENSEOMG00000045388, gene:ENSEOMG00000047178
Amaranthaceae Chenopodium quinoa 21 CQ.Regalona.r1.3AG0024370, CQ.Regalona.r1.3AG0024380 ...
CQ.Regalona.r1.3BG0025210, CQ.Regalona.r1.3BG0025220, CQ.Regalona.r1.4BG0020850, CQ.Regalona.r1.4BG0020870, CQ.Regalona.r1.4BG0020910, CQ.Regalona.r1.4BG0020930, CQ.Regalona.r1.5AG0010470, CQ.Regalona.r1.5BG0010960, CQ.Regalona.r1.6AG0014210, CQ.Regalona.r1.7AG0014580, CQ.Regalona.r1.7AG0014590, CQ.Regalona.r1.8AG0014920, CQ.Regalona.r1.8BG0002070, CQ.Regalona.r1.8BG0016210, CQ.Regalona.r1.9BG0007370, CQ.Regalona.r1.9BG0007400, CQ.Regalona.r1.9BG0007430, CQ.Regalona.r1.9BG0007450, CQ.Regalona.r1.9BG0018780
Anacardiaceae Pistacia vera 62 pistato.v30030240, pistato.v30030290, pistato.v30030320 ...
pistato.v30087490, pistato.v30087500, pistato.v30096650, pistato.v30096770, pistato.v30118900, pistato.v30126740, pistato.v30126750, pistato.v30127370, pistato.v30127380, pistato.v30127460, pistato.v30127480, pistato.v30127490, pistato.v30127520, pistato.v30127530, pistato.v30127560, pistato.v30127570, pistato.v30127580, pistato.v30127590, pistato.v30128930, pistato.v30130510, pistato.v30130570, pistato.v30130610, pistato.v30130620, pistato.v30131210, pistato.v30131220, pistato.v30151620, pistato.v30152410, pistato.v30157930, pistato.v30157940, pistato.v30157950, pistato.v30157960, pistato.v30157970, pistato.v30157980, pistato.v30159190, pistato.v30159200, pistato.v30160640, pistato.v30160670, pistato.v30160690, pistato.v30193810, pistato.v30194330, pistato.v30246110, pistato.v30246340, pistato.v30246350, pistato.v30246360, pistato.v30246420, pistato.v30246430, pistato.v30246450, pistato.v30246530, pistato.v30246580, pistato.v30246650, pistato.v30246710, pistato.v30246720, pistato.v30246730, pistato.v30246850, pistato.v30246890, pistato.v30277270, pistato.v30277280, pistato.v30277780, pistato.v30288470
Apiaceae Apium graveolens 9 Ag4G02801, Ag5G01559, Ag6G02680, Ag6G02681, Ag6G02682 ...
Ag6G02684, Ag6G02685, Ag6G02686, Ag6G02687
Arecaceae Cocos nucifera 23 COCNU_05G002690, COCNU_05G002720, COCNU_05G002800 ...
COCNU_05G002810, COCNU_05G009000, COCNU_06G011200, COCNU_06G011350, COCNU_06G011360, COCNU_07G000780, COCNU_07G000790, COCNU_10G010120, COCNU_10G010140, COCNU_16G003740, contig69435185G000010, scaffold007392G000010, scaffold007392G000030, scaffold008771G000030, scaffold008771G000040, scaffold012163G000020, scaffold026444G000010, scaffold041207G000010, scaffold041207G000020, scaffold051921G000010
Arecaceae Phoenix dactylifera 14 gene-LOC103699819, gene-LOC103700486, gene-LOC103703271 ...
gene-LOC103703399, gene-LOC103706817, gene-LOC103706818, gene-LOC103713018, gene-LOC103716817, gene-LOC103716841, gene-LOC103717611, gene-LOC103717612, gene-LOC113462704, gene-LOC120107464, gene-LOC120112516
Asparagaceae Asparagus officinalis 14 AsparagusV1_02.490.V1.1, AsparagusV1_06.1508.V1.1 ...
AsparagusV1_07.3894.V1.1, AsparagusV1_08.2916.V1.1, AsparagusV1_08.2917.V1.1, AsparagusV1_08.2919.V1.1, AsparagusV1_08.2934.V1.1, AsparagusV1_08.2935.V1.1, AsparagusV1_08.633.V1.1, AsparagusV1_08.634.V1.1, AsparagusV1_08.655.V1.1, AsparagusV1_08.658.V1.1, AsparagusV1_09.554.V1.1, AsparagusV1_10.270.V1.1
Asteraceae Flaveria trinervia 9 Ftri14G06096, Ftri14G26637, Ftri14G27555, Ftri15G19420 ...
Ftri4G19989, Ftri6G02233, Ftri6G31759, FtriNA08437, FtriNA25435
Brassicaceae Arabidopsis thaliana 25 AT1G12210.1, AT1G12220.1, AT1G12280.1, AT1G12290.1 ...
AT1G15890.1, AT1G51480.1, AT1G52660.1, AT1G61180.2, AT1G61190.1, AT1G61300.1, AT1G61310.1, AT1G62630.1, AT1G63350.1, AT1G63360.1, AT3G15700.1, AT4G10780.1, AT4G26090.1, AT4G27190.1, AT4G27220.1, AT5G05400.1, AT5G43730.1, AT5G43740.1, AT5G47250.1, AT5G47260.1, AT5G63020.1
Brassicaceae Eutrema salsugineum 28 Thhalv10000112m.g.v1.0, Thhalv10000769m.g.v1.0 ...
Thhalv10000773m.g.v1.0, Thhalv10002924m.g.v1.0, Thhalv10006759m.g.v1.0, Thhalv10006784m.g.v1.0, Thhalv10011574m.g.v1.0, Thhalv10017979m.g.v1.0, Thhalv10022114m.g.v1.0, Thhalv10023246m.g.v1.0, Thhalv10023248m.g.v1.0, Thhalv10023255m.g.v1.0, Thhalv10023256m.g.v1.0, Thhalv10023257m.g.v1.0, Thhalv10023258m.g.v1.0, Thhalv10023263m.g.v1.0, Thhalv10023266m.g.v1.0, Thhalv10023301m.g.v1.0, Thhalv10023842m.g.v1.0, Thhalv10023914m.g.v1.0, Thhalv10024085m.g.v1.0, Thhalv10024140m.g.v1.0, Thhalv10024315m.g.v1.0, Thhalv10024353m.g.v1.0, Thhalv10027047m.g.v1.0, Thhalv10028060m.g.v1.0, Thhalv10028114m.g.v1.0, Thhalv10028316m.g.v1.0
Brassicaceae Schrenkiella parvula 12 Sp1g10900.v2.2, Sp1g10910.v2.2, Sp1g14190.v2.2 ...
Sp1g39200.v2.2, Sp2g03280.v2.2, Sp2g03850.v2.2, Sp2g03980.v2.2, Sp3g14010.v2.2, Sp4g11155.v2.2, Sp5g35270.v2.2, Sp7g24110.v2.2, SpUn1045_0010.v2.2
Brassicaceae Brassica nigra 48 BniB02g006880.2N, BniB02g007060.2N, BniB02g007220.2N ...
BniB02g007270.2N, BniB02g007280.2N, BniB02g007290.2N, BniB02g007300.2N, BniB02g055170.2N, BniB02g082810.2N, BniB03g003310.2N, BniB03g003320.2N, BniB03g003340.2N, BniB03g004990.2N, BniB03g005010.2N, BniB03g005030.2N, BniB03g005040.2N, BniB03g005350.2N, BniB03g005710.2N, BniB03g063010.2N, BniB04g010300.2N, BniB04g010310.2N, BniB04g015120.2N, BniB04g015900.2N, BniB04g020800.2N, BniB04g021460.2N, BniB04g021480.2N, BniB04g021500.2N, BniB04g021570.2N, BniB04g027080.2N, BniB04g027100.2N, BniB04g027110.2N, BniB04g027120.2N, BniB04g029030.2N, BniB04g057220.2N, BniB05g008270.2N, BniB05g010190.2N, BniB05g011340.2N, BniB06g006310.2N, BniB06g011440.2N, BniB06g014690.2N, BniB06g040870.2N, BniB06g051490.2N, BniB07g046660.2N, BniB07g051120.2N, BniB07g054000.2N, BniB08g038510.2N, BniB08g064000.2N, BniB08g064100.2N
Casuarinaceae Casuarina equisetifolia 12 Ceq01G1125, Ceq01G1165, Ceq01G1166, Ceq01G1168, Ceq01G1169 ...
Ceq01G1172, Ceq01G1173, Ceq01G1230, Ceq04G0262, Ceq07G2243, Ceq07G2244, Ceq07G2245
Casuarinaceae Casuarina glauca 19 Cgl01G1296, Cgl01G1311, Cgl01G1313, Cgl01G1314, Cgl01G1316 ...
Cgl01G1368, Cgl01G1369, Cgl01G1370, Cgl02G0094, Cgl07G2551, Cgl07G2552, Cgl07G2555, Cgl07G2556, Cgl07G2557, Cgl07G2558, Cgl07G2560, Cgl07G2561, Cgl07G2566, Cgl09G0223
Cymodoceaceae Cymodocea nodosa 8 gene.Cymno07g06950, gene.Cymno13g00730, gene.Cymno13g00740 ...
gene.Cymno13g04480, gene.Cymno13g04980, gene.Cymno13g05020, gene.Cymno13g05190, gene.Cymno17g05970
Dunaliellaceae Dunaliella salina 1 Dusal.0153s00019.v1.0
Hydrocharitaceae Thalassia testudinum 22 gene.Thate02g36450, gene.Thate03g04480, gene.Thate03g24250 ...
gene.Thate05g03170, gene.Thate05g03180, gene.Thate05g03200, gene.Thate05g03250, gene.Thate05g03260, gene.Thate05g03270, gene.Thate05g03290, gene.Thate05g03420, gene.Thate05g03630, gene.Thate05g16640, gene.Thate05g16670, gene.Thate05g16850, gene.Thate05g16880, gene.Thate05g16890, gene.Thate05g16900, gene.Thate05g16910, gene.Thate05g16940, gene.Thate09g13510, gene.Thate09g13520
Malvaceae Hibiscus hamabo Siebold & Zucc. 11 nbisL1-mrna-12538, nbisL1-mrna-3755, nbisL1-mrna-3756 ...
nbisL1-mrna-3791, nbisL1-mrna-3795, nbisL1-mrna-3796, nbisL1-mrna-4899, nbisL1-mrna-9144, nbisL1-mrna-9191, nbisL1-mrna-9274, nbisL1-mrna-9474
Nitrariaceae Nitraria sibirica 4 evm.TU.LG01.417, evm.TU.LG01.449, evm.TU.LG02.1981 ...
evm.TU.LG05.2087
Plantaginaceae Plantago ovata 2 Pov_00036634, Pov_00039626
Plumbaginaceae Limonium bicolor 11 Lb2G08165, Lb3G15604, Lb3G18931, Lb4G22349, Lb4G22800 ...
Lb4G22897, Lb4G22898, Lb5G28212, Lb5G28213, Lb5G28222, Lb6G30779
Poaceae Echinochloa crus-galli 13 AH01.4315, AH02.3526, AH09.1551, BH01.4621, BH01.4658 ...
BH09.1751, CH01.4160, CH01.4932, CH02.3561, CH02.4704, CH02.4705, CH09.1871, Contig398.23
Poaceae Eleusine coracana subsp. coracana 13 gene-QOZ80_1AG0036190, gene-QOZ80_1BG0086210 ...
gene-QOZ80_1BG0096930, gene-QOZ80_3AG0241410, gene-QOZ80_3BG0286680, gene-QOZ80_4AG0310740, gene-QOZ80_4AG0310760, gene-QOZ80_4BG0341960, gene-QOZ80_4BG0341970, gene-QOZ80_6AG0531750, gene-QOZ80_6AG0531760, gene-QOZ80_6AG0531770, gene-QOZ80_6BG0485460
Poaceae Hordeum vulgare 7 HORVU.MOREX.r3.2HG0181540.1, HORVU.MOREX.r3.4HG0391180.1 ...
HORVU.MOREX.r3.3HG0294430.1.CDS1, HORVU.MOREX.r3.3HG0321320.1.CDS1, HORVU.MOREX.r3.3HG0322610.1.CDS1, HORVU.MOREX.r3.5HG0526460.1, HORVU.MOREX.r3.6HG0634140.1
Poaceae Lolium multiflorum 12 gene-QYE76_008727, gene-QYE76_010424, gene-QYE76_016034 ...
gene-QYE76_047898, gene-QYE76_048532, gene-QYE76_048653, gene-QYE76_056025, gene-QYE76_056067, gene-QYE76_058164, gene-QYE76_058243, gene-QYE76_058792, gene-QYE76_069248
Poaceae Oryza coarctata 17 Oco01G022200, Oco01G030280, Oco02G022790, Oco02G031420 ...
Oco05G005980, Oco05G005990, Oco05G008440, Oco06G006130, Oco06G006140, Oco06G008740, Oco07G008230, Oco07G010660, Oco08G003420, Oco08G003440, Oco17G003020, Oco21G005540, Oco23G003600
Poaceae Oryza sativa 18 LOC_Os01g57870.1, LOC_Os01g63430.1, LOC_Os01g72680.1 ...
LOC_Os03g10900.1, LOC_Os03g10910.1, LOC_Os03g14900.1, LOC_Os04g14750.1, LOC_Os04g39460.1, LOC_Os04g43440.1, LOC_Os09g10054.1, LOC_Os09g14010.1, LOC_Os09g14060.1, LOC_Os09g14100.1, LOC_Os11g29090.1, LOC_Os11g36410.1, LOC_Os12g10410.1, LOC_Os12g30720.1, LOC_Os12g30760.1
Poaceae Paspalum vaginatum 4 gene-BS78_01G415200, gene-BS78_03G302100 ...
gene-BS78_05G060500, gene-BS78_06G158200
Poaceae Puccinellia tenuiflora 11 Pt_Chr0102073, Pt_Chr0102094, Pt_Chr0302089, Pt_Chr0302125 ...
Pt_Chr0302126, Pt_Chr0504752, Pt_Chr0601666, Pt_Chr0601691, Pt_Chr0605434, Pt_Chr0605732, Pt_Chr0605779
Poaceae Sporobolus alterniflorus 11 Chr01G029760, Chr02G000790, Chr02G007590, Chr03G017850 ...
Chr05G025930, Chr0G004110, Chr12G009750, Chr23G008840, Chr25G010800, Chr26G010870, Chr30G010470
Poaceae Thinopyrum elongatum 15 Tel1E01G634800, Tel2E01G659300, Tel2E01G659400 ...
Tel3E01G520200, Tel3E01G520400, Tel3E01G798500, Tel3E01G811400, Tel3E01G840400, Tel4E01G029800, Tel4E01G385100, Tel5E01G763300, Tel5E01G763400, Tel6E01G563000, Tel6E01G792100, Tel7E01G163700
Poaceae Triticum dicoccoides 18 gene_TRIDC1BG065610, gene_TRIDC2AG055350 ...
gene_TRIDC2AG055360, gene_TRIDC2AG076200, gene_TRIDC2AG076210, gene_TRIDC2BG058140, gene_TRIDC2BG058150, gene_TRIDC3AG046770, gene_TRIDC3AG070640, gene_TRIDC3BG053060, gene_TRIDC3BG079200, gene_TRIDC4AG011350, gene_TRIDC4BG002260, gene_TRIDC4BG039100, gene_TRIDC5BG074050, gene_TRIDC6BG068140, gene_TRIDC6BG071720, gene_TRIDC7AG069260
Poaceae Triticum aestivum 32 TraesCS1B02G402200.1, TraesCS1B02G415600.1 ...
TraesCS1D02G396200.1.cds1, TraesCS2A02G384000.1, TraesCS2A02G384100.1, TraesCS2A02G545300.1, TraesCS2B02G401300.1, TraesCS2B02G575800.1.cds1, TraesCS2D02G380400.1, TraesCS2D02G380500.1, TraesCS2D02G380600.1.cds1, TraesCS2D02G380800.1, TraesCS3A02G325600.1.cds1, TraesCS3B02G354400.1.cds1, TraesCS3B02G548200.1.cds1, TraesCS3D02G319000.1.cds1, TraesCS3D02G502400.1.cds1, TraesCS3D02G502800.1, TraesCS4A02G082800.1, TraesCS4B02G013300.1, TraesCS4B02G221200.1, TraesCS4D02G221600.1, TraesCS5A02G480900.1, TraesCS5B02G493900.1.cds1, TraesCS5B02G494100.1, TraesCS5D02G494000.1, TraesCS5D02G494300.1, TraesCS5D02G494400.1, TraesCS6B02G470100.1, TraesCS6D02G407600.1, TraesCS7A02G564000.1.cds1, TraesCS7D02G520800.1.cds1
Poaceae Zea mays 5 Zm00001eb010990_P001, Zm00001eb077540_P002 ...
Zm00001eb151150_P001, Zm00001eb398450_P001, Zm00001eb426550_P001
Poaceae Zoysia japonica 4 nbis-gene-2228, nbis-gene-31294, nbis-gene-37069 ...
nbis-gene-37071
Poaceae Zoysia macrostachya 6 Zma_g11309, Zma_g11310, Zma_g1621, Zma_g20039, Zma_g20041 ...
Zma_g9402
Portulacaceae Portulaca oleracea 10 evm.TU.LG01.2089, evm.TU.LG02.690, evm.TU.LG04.2046 ...
evm.TU.LG08.1000, evm.TU.LG14.1262, evm.TU.LG18.854, evm.TU.LG18.855, evm.TU.LG20.1022, evm.TU.LG20.1023, evm.TU.LG22.73
Posidoniaceae Posidonia oceanica 34 gene.Posoc01g40040, gene.Posoc01g40050, gene.Posoc02g34440 ...
gene.Posoc02g34980, gene.Posoc03g14670, gene.Posoc04g14780, gene.Posoc05g01480, gene.Posoc07g02240, gene.Posoc07g02250, gene.Posoc07g02260, gene.Posoc07g02270, gene.Posoc07g02280, gene.Posoc07g02290, gene.Posoc07g02300, gene.Posoc07g02320, gene.Posoc07g02330, gene.Posoc07g02340, gene.Posoc07g04060, gene.Posoc07g14700, gene.Posoc07g15210, gene.Posoc07g15250, gene.Posoc08g03320, gene.Posoc08g10570, gene.Posoc08g10580, gene.Posoc08g10630, gene.Posoc08g10640, gene.Posoc08g10700, gene.Posoc08g10720, gene.Posoc10g01190, gene.Posoc10g01280, gene.Posoc10g01600, gene.Posoc10g01900, gene.Posoc10g01910, gene.Posoc10g06610
Rhizophoraceae Bruguiera sexangula 11 evm.TU.52596.1, evm.TU.53680.1, evm.TU.Scaffold_1_RagTag.845 ...
evm.TU.Scaffold_10_RagTag.1255, evm.TU.Scaffold_10_RagTag.541, evm.TU.Scaffold_14_RagTag.904, evm.TU.Scaffold_15_RagTag.261, evm.TU.Scaffold_15_RagTag.262, evm.TU.Scaffold_18_RagTag.699, evm.TU.Scaffold_2_RagTag.1177, evm.TU.Scaffold_5_RagTag.1238
Rhizophoraceae Carallia pectinifolia 42 nbisL1-mrna-11709, nbisL1-mrna-12981, nbisL1-mrna-16663 ...
nbisL1-mrna-16672, nbisL1-mrna-16736, nbisL1-mrna-16744, nbisL1-mrna-17838, nbisL1-mrna-21945, nbisL1-mrna-21946, nbisL1-mrna-21962, nbisL1-mrna-23445, nbisL1-mrna-23446, nbisL1-mrna-26498, nbisL1-mrna-26500, nbisL1-mrna-26501, nbisL1-mrna-26503, nbisL1-mrna-26506, nbisL1-mrna-28158, nbisL1-mrna-28200, nbisL1-mrna-28202, nbisL1-mrna-28204, nbisL1-mrna-28205, nbisL1-mrna-28207, nbisL1-mrna-28208, nbisL1-mrna-28209, nbisL1-mrna-28212, nbisL1-mrna-3825, nbisL1-mrna-3826, nbisL1-mrna-6660, nbisL1-mrna-6661, nbisL1-mrna-6663, nbisL1-mrna-6829, nbisL1-mrna-6846, nbisL1-mrna-6908, nbisL1-mrna-6964, nbisL1-mrna-6970, nbisL1-mrna-6973, nbisL1-mrna-6976, nbisL1-mrna-7064, nbisL1-mrna-7172, nbisL1-mrna-7252, nbisL1-mrna-7271
Rhizophoraceae Ceriops tagal 13 nbisL1-mrna-10184, nbisL1-mrna-10186, nbisL1-mrna-1290 ...
nbisL1-mrna-14668, nbisL1-mrna-16336, nbisL1-mrna-17188, nbisL1-mrna-17255, nbisL1-mrna-17596, nbisL1-mrna-3881, nbisL1-mrna-8944, nbisL1-mrna-8945, nbisL1-mrna-8946, nbisL1-mrna-9281
Rhizophoraceae Ceriops zippeliana 27 nbisL1-mrna-11212, nbisL1-mrna-1192, nbisL1-mrna-12286 ...
nbisL1-mrna-13731, nbisL1-mrna-14054, nbisL1-mrna-16927, nbisL1-mrna-17030, nbisL1-mrna-17578, nbisL1-mrna-18816, nbisL1-mrna-18817, nbisL1-mrna-19093, nbisL1-mrna-19159, nbisL1-mrna-19162, nbisL1-mrna-19163, nbisL1-mrna-19172, nbisL1-mrna-20066, nbisL1-mrna-20985, nbisL1-mrna-22186, nbisL1-mrna-22187, nbisL1-mrna-5302, nbisL1-mrna-7786, nbisL1-mrna-8075, nbisL1-mrna-8077, nbisL1-mrna-8782, nbisL1-mrna-8783, nbisL1-mrna-8784, nbisL1-mrna-8863
Rhizophoraceae Kandelia candel 23 add.evm.TU.utg000001l.75, add.evm.TU.utg000003l.123 ...
add.evm.TU.utg000004l.139, add.evm.TU.utg000004l.34, add.evm.TU.utg000004l.35, add.evm.TU.utg000004l.36, add.evm.TU.utg000004l.37, add.evm.TU.utg000004l.44, add.evm.TU.utg000004l.45, add.evm.TU.utg000004l.46, add.evm.TU.utg000004l.49, add.evm.TU.utg000004l.50, add.evm.TU.utg000009l.179, add.evm.TU.utg000013l.139, add.evm.TU.utg000013l.140, add.evm.TU.utg000023l.115, add.evm.TU.utg000025l.41, add.evm.TU.utg000033l.120, add.evm.TU.utg000033l.185, evm.TU.utg000004l.348, evm.TU.utg000006l.723, evm.TU.utg000016l.936, evm.TU.utg000023l.32
Rhizophoraceae Kandelia obovata 10 Maker00003946, Maker00004031, Maker00004328, Maker00004779 ...
Maker00011245, Maker00013527, Maker00014673, Maker00014863, Maker00018758, Maker00018969
Rhizophoraceae Rhizophora apiculata 8 nbisL1-mrna-10799, nbisL1-mrna-18331, nbisL1-mrna-20195 ...
nbisL1-mrna-21036, nbisL1-mrna-21756, nbisL1-mrna-22141, nbisL1-mrna-23405, nbisL1-mrna-8280
Rhizophoraceae Rhizophora mangle 18 nbisL1-mrna-14296, nbisL1-mrna-14297, nbisL1-mrna-1670 ...
nbisL1-mrna-17946, nbisL1-mrna-17947, nbisL1-mrna-17948, nbisL1-mrna-17950, nbisL1-mrna-17951, nbisL1-mrna-18064, nbisL1-mrna-21394, nbisL1-mrna-21395, nbisL1-mrna-21396, nbisL1-mrna-24000, nbisL1-mrna-5549, nbisL1-mrna-8166, nbisL1-mrna-8345, nbisL1-mrna-9126, nbisL1-mrna-928
Salicaceae Populus euphratica 34 populus_peu00289, populus_peu00290, populus_peu00383 ...
populus_peu00460, populus_peu00469, populus_peu00470, populus_peu01395, populus_peu11910, populus_peu11911, populus_peu15599, populus_peu17518, populus_peu17519, populus_peu17531, populus_peu19511, populus_peu19512, populus_peu19565, populus_peu19566, populus_peu19567, populus_peu19573, populus_peu19575, populus_peu19663, populus_peu19719, populus_peu19738, populus_peu19748, populus_peu19759, populus_peu19763, populus_peu19770, populus_peu19772, populus_peu24566, populus_peu25789, populus_peu28717, populus_peu37044, populus_peu37417, populus_peu38109
Solanaceae Lycium barbarum 16 gene-LOC132603645, gene-LOC132606758, gene-LOC132607036 ...
gene-LOC132607335, gene-LOC132607570, gene-LOC132608381, gene-LOC132609362, gene-LOC132609488, gene-LOC132609787, gene-LOC132612702, gene-LOC132636608, gene-LOC132636907, gene-LOC132636908, gene-LOC132636916, gene-LOC132636919, gene-LOC132637857
Solanaceae Solanum chilense 12 SOLCI000749300, SOLCI001689900, SOLCI001690000 ...
SOLCI002649300, SOLCI002831600, SOLCI002951700, SOLCI003924700, SOLCI004666000, SOLCI005436900, SOLCI005437000, SOLCI005737600, SOLCI006620100
Solanaceae Solanum pennellii 10 gene-LOC107005707, gene-LOC107010246, gene-LOC107010247 ...
gene-LOC107012107, gene-LOC107021914, gene-LOC107024343, gene-LOC107027337, gene-LOC107032140, gene-LOC114074347, gene-LOC114074860
Tamaricaceae Reaumuria soongarica 2 MSTRG.2419_chr02_-, STRG.11644_chr02_+
Tamaricaceae Tamarix chinensis 4 TC03G0142, TC04G1292, TC10G1610, TC10G1611
Zosteraceae Zostera marina 14 Zosma01g30890.v3.1, Zosma02g14220.v3.1, Zosma02g14380.v3.1 ...
Zosma02g14440.v3.1, Zosma02g15640.v3.1, Zosma02g15650.v3.1, Zosma04g04740.v3.1, Zosma04g12310.v3.1, Zosma04g12370.v3.1, Zosma04g20850.v3.1, Zosma06g13630.v3.1, Zosma11g00100.v3.1, Zosma18g00210.v3.1, Zosma25g00050.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.