halophFGD

Basic Information

Locus ID: Ag5G00727

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: BTB POZ and TAZ domain-containing protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr5	28934470	28937648	-	Ag5G00727

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.94	38,833.67 Da	63.53	88.92	-0.35

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd14733	BACK	118	176	5.45831E-6	-
Pfam	PF00651	BTB/POZ domain	15	116	2.3E-13	IPR000210
Pfam	PF02135	TAZ zinc finger	200	286	3.9E-10	IPR000197
SUPERFAMILY	SSF54695	POZ domain	15	115	4.29E-12	IPR011333
SUPERFAMILY	SSF57933	TAZ domain	192	294	6.54E-20	IPR035898
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	7	116	1.0E-18	IPR011333
Gene3D	G3DSA:1.25.40.420	-	117	188	4.5E-13	-
Gene3D	G3DSA:1.20.1020.10	TAZ domain	189	316	4.1E-19	IPR035898
SMART	SM00551	TAZ_2	193	287	6.3E-17	IPR000197
SMART	SM00225	BTB_4	15	117	1.0E-10	IPR000210
ProSiteProfiles	PS50097	BTB domain profile.	15	85	11.543601	IPR000210

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K10523 (speckle-type POZ protein)

Pathway:

ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G63160.1	BTB and TAZ domain protein 1. BTB and TAZ domain protein. Short-lived nuclear-cytoplasmic protein targeted for degradation by the 26S proteosome pathway. Acts redundantly with BT2 and BT3 during female gametophyte development.
RefSeq	XP_017215801.1	PREDICTED: BTB/POZ and TAZ domain-containing protein 1-like isoform X1 [Daucus carota subsp. sativus]
Swiss-Prot	Q9FMK7	BTB/POZ and TAZ domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BT1 PE=1 SV=1
TrEMBL	A0A164UN96	BTB domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_026199 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	2.556121	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	4.414883	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	6.250216	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	5.152344	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	5.353946	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	7.089482	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	8.494172	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	3.798919	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	9.593533	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	11.2915	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	6.516374	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	3.289074	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	3.952351	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	1.469413	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	50.895538	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	58.946529	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	53.300404	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	214.711853	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	210.43071	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	160.902649	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	214.418106	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	174.187775	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	179.608307	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	106.794395	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	167.340454	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	132.942322	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	168.150772	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	206.907623	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	134.828705	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	3.763634		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	3.861919		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	3.072823		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	57.576099		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	32.004669		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	63.02652		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	21.107012		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	37.699585		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	20.383957		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	40.783024	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	7.667212	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	98.42186	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	237.995255	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	78.740356	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	1098.859253	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	1211.960571	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	239.696014	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	796.41803	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	52.094131	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	13.084799	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	27.385931	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	9	jg10945, jg17357, jg18823, jg25960, jg25963, jg27539, jg5979 ... jg30714, jg39944
Aizoaceae	Mesembryanthemum crystallinum	3	gene_16741, gene_2828, gene_5459
Amaranthaceae	Atriplex hortensis	3	Ah019656, Ah027538, Ah028495
Amaranthaceae	Beta vulgaris	2	BVRB_3g058930, BVRB_6g128090
Amaranthaceae	Salicornia bigelovii	8	Sbi_jg13156, Sbi_jg26694, Sbi_jg33869, Sbi_jg38475 ... Sbi_jg52683, Sbi_jg52684, Sbi_jg6579, Sbi_jg6580
Amaranthaceae	Salicornia europaea	4	Seu_jg15207, Seu_jg15345, Seu_jg15346, Seu_jg9170
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00006442, GOSA_00010115, GOSA_00011779
Amaranthaceae	Suaeda glauca	6	Sgl01876, Sgl07054, Sgl34604, Sgl40019, Sgl74005, Sgl77509
Amaranthaceae	Chenopodium album	8	gene:ENSEOMG00000001065, gene:ENSEOMG00000008392 ... gene:ENSEOMG00000014715, gene:ENSEOMG00000026262, gene:ENSEOMG00000030611, gene:ENSEOMG00000036892, gene:ENSEOMG00000042045, gene:ENSEOMG00000045589
Amaranthaceae	Chenopodium quinoa	7	CQ.Regalona.r1.3AG0011190, CQ.Regalona.r1.3BG0011380 ... CQ.Regalona.r1.3BG0016170, CQ.Regalona.r1.6AG0026200, CQ.Regalona.r1.6BG0027630, CQ.Regalona.r1.7AG0008650, CQ.Regalona.r1.9BG0008750
Anacardiaceae	Pistacia vera	5	pistato.v30140450, pistato.v30205130, pistato.v30241480 ... pistato.v30247740, pistato.v30269110
Apiaceae	Apium graveolens	6	Ag4G00246, Ag4G01144, Ag5G00333, Ag5G00727, Ag5G02740 ... Ag9G00559
Arecaceae	Cocos nucifera	4	COCNU_02G013440, COCNU_05G003190, COCNU_08G003650 ... scaffold001527G000040
Arecaceae	Phoenix dactylifera	10	gene-LOC103696612, gene-LOC103706014, gene-LOC103709180 ... gene-LOC103714450, gene-LOC103718574, gene-LOC103719679, gene-LOC103720201, gene-LOC120106816, gene-LOC120111347, gene-LOC120113161
Asparagaceae	Asparagus officinalis	4	AsparagusV1_04.1873.V1.1, AsparagusV1_04.601.V1.1 ... AsparagusV1_09.918.V1.1, AsparagusV1_09.919.V1.1
Asteraceae	Flaveria trinervia	5	Ftri17G24944, Ftri18G21599, Ftri18G31278, Ftri1G06920 ... Ftri9G30316
Brassicaceae	Arabidopsis thaliana	5	AT1G05690.1, AT3G48360.1, AT4G37610.1, AT5G63160.1 ... AT5G67480.2
Brassicaceae	Eutrema salsugineum	5	Thhalv10004392m.g.v1.0, Thhalv10004447m.g.v1.0 ... Thhalv10007799m.g.v1.0, Thhalv10010463m.g.v1.0, Thhalv10025450m.g.v1.0
Brassicaceae	Schrenkiella parvula	5	Sp1g04510.v2.2, Sp2g26290.v2.2, Sp2g29170.v2.2 ... Sp5g13690.v2.2, Sp7g35270.v2.2
Brassicaceae	Brassica nigra	10	BniB02g088630.2N, BniB03g001480.2N, BniB04g002000.2N ... BniB05g001370.2N, BniB05g073840.2N, BniB06g011640.2N, BniB06g014370.2N, BniB06g044770.2N, BniB08g061610.2N, BniB08g076680.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq01G1854, Ceq05G1421, Ceq07G0306
Casuarinaceae	Casuarina glauca	3	Cgl01G2023, Cgl05G1422, Cgl07G0308
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno07g12800
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate02g09770, gene.Thate02g09780, gene.Thate04g23270
Malvaceae	Hibiscus hamabo Siebold & Zucc.	3	nbisL1-mrna-11973, nbisL1-mrna-2074, nbisL1-mrna-7127
Nitrariaceae	Nitraria sibirica	3	evm.TU.LG02.922, evm.TU.LG10.1003, evm.TU.LG11.518
Plantaginaceae	Plantago ovata	3	Pov_00019709, Pov_00022858, Pov_00023804
Plumbaginaceae	Limonium bicolor	2	Lb1G05479, Lb4G26166
Poaceae	Echinochloa crus-galli	13	AH02.4152, AH02.4242, AH07.2471, AH09.1338, BH02.4168 ... BH02.4169, BH02.4269, BH07.2277, BH09.1517, CH02.4202, CH02.4302, CH07.2352, CH09.1630
Poaceae	Eleusine coracana subsp. coracana	8	gene-QOZ80_1AG0042760, gene-QOZ80_1AG0043730 ... gene-QOZ80_1BG0092690, gene-QOZ80_1BG0093750, gene-QOZ80_2AG0136250, gene-QOZ80_2BG0191850, gene-QOZ80_4AG0313270, gene-QOZ80_4BG0344380
Poaceae	Hordeum vulgare	5	HORVU.MOREX.r3.2HG0176200.1, HORVU.MOREX.r3.2HG0176250.1 ... HORVU.MOREX.r3.3HG0306270.1, HORVU.MOREX.r3.3HG0308180.1, HORVU.MOREX.r3.3HG0308190.1
Poaceae	Lolium multiflorum	8	gene-QYE76_019048, gene-QYE76_023457, gene-QYE76_044721 ... gene-QYE76_044722, gene-QYE76_044748, gene-QYE76_044750, gene-QYE76_048357, gene-QYE76_057270
Poaceae	Oryza coarctata	7	Oco01G027090, Oco01G027800, Oco02G028160, Oco02G028900 ... Oco03G014390, Oco04G014740, Oco08G008750
Poaceae	Oryza sativa	5	LOC_Os01g66890.1, LOC_Os01g68020.1, LOC_Os02g38320.1 ... LOC_Os04g40630.1, LOC_Os10g29060.1
Poaceae	Paspalum vaginatum	4	gene-BS78_03G365100, gene-BS78_03G373500 ... gene-BS78_04G184200, gene-BS78_06G137600
Poaceae	Puccinellia tenuiflora	7	Pt_Chr0204455, Pt_Chr0307145, Pt_Chr0307246, Pt_Chr0307248 ... Pt_Chr0600185, Pt_Chr0600350, Pt_Chr0600394
Poaceae	Sporobolus alterniflorus	10	Chr05G030670, Chr05G031310, Chr09G012540, Chr0G023900 ... Chr0G024490, Chr0G031290, Chr0G031900, Chr13G008440, Chr25G009280, Chr30G009150
Poaceae	Thinopyrum elongatum	5	Tel2E01G591500, Tel2E01G591800, Tel3E01G635900 ... Tel3E01G657500, Tel3E01G657600
Poaceae	Triticum dicoccoides	9	gene_TRIDC2AG049490, gene_TRIDC2AG049510 ... gene_TRIDC2BG052380, gene_TRIDC3AG057100, gene_TRIDC3AG058710, gene_TRIDC3AG058730, gene_TRIDC3BG063970, gene_TRIDC3BG065730, gene_TRIDC3BG065750
Poaceae	Triticum aestivum	15	TraesCS2A02G323000.1, TraesCS2A02G323200.1 ... TraesCS2B02G359400.1, TraesCS2B02G359600.1, TraesCS2D02G339700.1, TraesCS2D02G339900.1, TraesCS3A02G400400.1, TraesCS3A02G413600.1, TraesCS3A02G413700.1, TraesCS3B02G433400.1, TraesCS3B02G448000.1, TraesCS3B02G448100.1, TraesCS3D02G394800.1, TraesCS3D02G408000.1, TraesCS3D02G408100.1
Poaceae	Zea mays	4	Zm00001eb144120_P001, Zm00001eb145030_P002 ... Zm00001eb246190_P001, Zm00001eb425100_P003
Poaceae	Zoysia japonica	7	nbis-gene-11064, nbis-gene-11125, nbis-gene-28419 ... nbis-gene-29748, nbis-gene-36905, nbis-gene-58685, nbis-gene-58980
Poaceae	Zoysia macrostachya	5	Zma_g11762, Zma_g13817, Zma_g19930, Zma_g9176, Zma_g9221
Portulacaceae	Portulaca oleracea	8	evm.TU.LG03.1131, evm.TU.LG04.820, evm.TU.LG05.2115 ... evm.TU.LG12.470, evm.TU.LG16.1592, evm.TU.LG18.42, evm.TU.LG26.75, evm.TU.LG26.955
Posidoniaceae	Posidonia oceanica	2	gene.Posoc05g01730, gene.Posoc05g01740
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_11_RagTag.1105, evm.TU.Scaffold_4_RagTag.409 ... evm.TU.Scaffold_3_RagTag.1552, evm.TU.Scaffold_6_RagTag.1790
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-14785, nbisL1-mrna-17364, nbisL1-mrna-1863 ... nbisL1-mrna-28966
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-1009, nbisL1-mrna-14247, nbisL1-mrna-5229 ... nbisL1-mrna-9377
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-11976, nbisL1-mrna-12653, nbisL1-mrna-1914 ... nbisL1-mrna-2768
Rhizophoraceae	Kandelia candel	4	evm.TU.utg000008l.265, evm.TU.utg000010l.164 ... evm.TU.utg000011l.1090, evm.TU.utg000019l.297
Rhizophoraceae	Kandelia obovata	4	Maker00001215, Maker00001815, Maker00007557, Maker00008702
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-14643, nbisL1-mrna-15449, nbisL1-mrna-5400 ... nbisL1-mrna-696
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-12922, nbisL1-mrna-1399, nbisL1-mrna-3293 ... nbisL1-mrna-8735
Salicaceae	Populus euphratica	6	populus_peu22491, populus_peu22492, populus_peu23282 ... populus_peu23880, populus_peu28767, populus_peu30189
Solanaceae	Lycium barbarum	6	gene-LOC132601739, gene-LOC132601746, gene-LOC132609298 ... gene-LOC132622447, gene-LOC132623539, gene-LOC132632549
Solanaceae	Solanum chilense	4	SOLCI004236000, SOLCI004734800, SOLCI005588100 ... SOLCI007486800
Solanaceae	Solanum pennellii	7	gene-LOC107006094, gene-LOC107009351, gene-LOC107015169 ... gene-LOC107019839, gene-LOC107021774, gene-LOC107023662, gene-LOC107026803
Tamaricaceae	Reaumuria soongarica	4	STRG.19918_chr07_+, STRG.4473_chr03_-, gene_15357, gene_6444
Tamaricaceae	Tamarix chinensis	4	TC01G1305, TC04G1910, TC08G2567, TC09G0920
Zosteraceae	Zostera marina	1	Zosma02g09500.v3.1