HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Ag5G00703
Species & Taxonomic ID: Apium graveolens & 4045
Genome Assembly: GCA_009905375.1
Description: F-box and associated interaction domains-containing protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr5 27473550 27474032 - Ag5G00703
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.23 18,931.87 Da 18.96 84.62 -0.12
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 1 117 3.1E-13 IPR017451
Coils Coil Coil 152 160 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_017225189.1 PREDICTED: F-box/kelch-repeat protein At3g23880-like [Daucus carota subsp. sativus] 0
TrEMBL A0A175YH68 F-box domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_030080 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
Network
🔍 Co-expression Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Apiaceae Apium graveolens 19 Ag10G01596, Ag10G01791, Ag10G02271, Ag10G02272, Ag10G02514 ...
Ag10G02844, Ag11G03848, Ag11G04933, Ag1G00622, Ag3G00014, Ag3G00173, Ag3G00190, Ag3G00228, Ag3G00380, Ag4G01437, Ag4G02758, Ag5G00703, Ag6G00095, Ag9G00794
Plantaginaceae Plantago ovata 1 Pov_00008960
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.