Basic Information
Locus ID:
Ag5G00476
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
Belongs to the 14-3-3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 15002112 | 15005801 | + | Ag5G00476 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.69 | 29,192.38 Da | 44.23 | 89.69 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00244 | 14-3-3 protein | 15 | 238 | 6.2E-103 | IPR023410 |
| SUPERFAMILY | SSF48445 | 14-3-3 protein | 7 | 240 | 1.44E-103 | IPR036815 |
| Gene3D | G3DSA:1.20.190.20 | - | 1 | 250 | 2.0E-130 | IPR036815 |
| SMART | SM00101 | 1433_4 | 8 | 251 | 1.6E-204 | IPR023410 |
| PIRSF | PIRSF000868 | 14-3-3 | 2 | 250 | 2.9E-116 | IPR000308 |
| ProSitePatterns | PS00797 | 14-3-3 proteins signature 2. | 220 | 239 | - | IPR023409 |
| ProSitePatterns | PS00796 | 14-3-3 proteins signature 1. | 48 | 58 | - | IPR023409 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 122 | 144 | 6.7E-88 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 157 | 183 | 6.7E-88 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 42 | 71 | 6.7E-88 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 91 | 115 | 6.7E-88 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 211 | 240 | 6.7E-88 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 184 | 210 | 6.7E-88 | IPR000308 |
| Coils | Coil | Coil | 14 | 34 | - | - |
KEGG Pathway
KO Term:
Pathway:
ko04011 (MAPK signaling pathway - yeast)
map04011 (MAPK signaling pathway - yeast)
ko04110 (Cell cycle)
map04110 (Cell cycle)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02520.1 | general regulatory factor 7. Encodes GF14 ν, a 14-3-3 protein isoform (14-3-3ν). | 0 |
| RefSeq | XP_017219317.1 | PREDICTED: 14-3-3-like protein A [Daucus carota subsp. sativus] | 0 |
| Q96450 | 14-3-3-like protein A OS=Glycine max OX=3847 GN=GF14A PE=2 SV=1 | 0 | |
| TrEMBL | A0A164UG53 | 14_3_3 domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_025919 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| PRJNA723697 | SRX10692252 | 161.550903 | Shengqin NO.2 | seed | S1-1 | S1-1 | initial formation stage (S1) |
| PRJNA723697 | SRX10692254 | 149.910004 | Shengqin NO.2 | seed | S1-3 | S1-3 | initial formation stage (S1) |
| PRJNA723697 | SRX10692255 | 134.557159 | Shengqin NO.2 | seed | S3-1 | S3-1 | middle development stage (S3) |
| PRJNA723697 | SRX10692256 | 138.722519 | Shengqin NO.2 | seed | S3-2 | S3-2 | middle development stage (S3) |
| PRJNA723697 | SRX10692257 | 131.541489 | Shengqin NO.2 | seed | S3-3 | S3-3 | middle development stage (S3) |
| PRJNA723697 | SRX10692258 | 131.346939 | Shengqin NO.2 | seed | S5-1 | S5-1 | maturation stage (S5) |
| PRJNA723697 | SRX10692259 | 92.955719 | Shengqin NO.2 | seed | S5-2 | S5-2 | maturation stage (S5) |
| PRJNA723697 | SRX10692260 | 75.265518 | Shengqin NO.2 | seed | S5-3 | S5-3 | maturation stage (S5) |
| PRJNA884666 | SRX17729272 | 288.586914 | celery | anther | W99A-r1 | male sterile line | |
| PRJNA884666 | SRX17729273 | 277.971741 | celery | anther | W99A-r2 | male sterile line | |
| PRJNA884666 | SRX17729274 | 276.329285 | celery | anther | W99A-r3 | male sterile line | |
| PRJNA884666 | SRX17729275 | 264.547577 | celery | anther | W99B-r1 | maintainer line | |
| PRJNA884666 | SRX17729276 | 239.169449 | celery | anther | W99B-r2 | maintainer line | |
| PRJNA884666 | SRX17729277 | 230.808243 | celery | anther | W99B-r3 | maintainer line | |
| PRJNA884180 | SRX17743889 | 331.775116 | var. secalinum Yablochny | collenchyma | Col_S1_rep1-1 | ||
| PRJNA884180 | SRX17748056 | 367.563202 | var. secalinum Yablochny | collenchyma | Col_S1_rep3 | biological replicate 3 | |
| PRJNA884180 | SRX17748057 | 405.63913 | var. secalinum Yablochny | collenchyma | Col_S1_rep4 | biological replicate 4 | |
| PRJNA884180 | SRX17748678 | 305.932007 | var. secalinum Yablochny | parenchyma | Par_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17748679 | 342.860565 | var. secalinum Yablochny | parenchyma | Par_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17748680 | 398.422577 | var. secalinum Yablochny | parenchyma | Par_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17748681 | 273.978119 | var. secalinum Yablochny | parenchyma | Par_S1_rep4 | Biological replicate 4 | |
| PRJNA884180 | SRX17748898 | 439.104675 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17748899 | 511.532562 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17748900 | 494.678223 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17748901 | 478.900452 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep4 | Biological replicate 4 | |
| PRJNA884180 | SRX17749129 | 341.745422 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17749130 | 432.652283 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17749131 | 239.546967 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17749132 | 339.890411 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep4 | Biological replicate 4 | |
| PRJNA1124269 | SRX24936411 | 275.738831 | leaf | CK1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936412 | 236.02417 | leaf | CK2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936413 | 249.815353 | leaf | CK3 | replicate=biological replicate3 | ||
| PRJNA1124269 | SRX24936414 | 238.49733 | leaf | D1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936415 | 232.783661 | leaf | D2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936416 | 286.168182 | leaf | D3 | replicate=biological replicate3 | ||
| PRJNA1124269 | SRX24936417 | 200.680359 | leaf | MD1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936418 | 163.296051 | leaf | MD2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936419 | 195.502319 | leaf | MD3 | replicate=biological replicate3 | ||
| PRJNA387092 | SRX2833309 | 259.647858 | shanghaihuangxin | leaf | leaves between 0.5 and 1 cm in breadth, folded; | stage 2 | |
| PRJNA387092 | SRX2833321 | 183.909531 | shanghaihuangxin | leaf | leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion | stage 5 | |
| PRJNA387092 | SRX2833323 | 93.716652 | shanghaihuangxin | leaf | leaves >3 cm, unfolded, with clearstem extension | stage 7 | |
| PRJNA543957 | SRX5879598 | 369.004791 | Zhangzhou lvqing | stem | Se3 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879599 | 750.521729 | Zhangzhou lvqing | stem | Se2 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879600 | 435.940948 | Zhangzhou lvqing | stem | Mock2 | mock | |
| PRJNA543957 | SRX5879601 | 562.808105 | Zhangzhou lvqing | stem | Mock1 | mock | |
| PRJNA543957 | SRX5879602 | 375.734955 | Zhangzhou lvqing | stem | Se1 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879603 | 538.193848 | Zhangzhou lvqing | stem | Mock3 | mock | |
| PRJNA609149 | SRX7815917 | 279.744324 | Jinnan Shiqin | flower bud | early flower bud | early flower bud | |
| PRJNA609149 | SRX7815918 | 238.74585 | Jinnan Shiqin | flower bud | middle flower bud | middle flower bud | |
| PRJNA609149 | SRX7815919 | 227.679611 | Jinnan Shiqin | flower bud | early flowering period | early flowering period |
Orthology