Basic Information
Locus ID:
Ag5G00350
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 8647472 | 8648274 | + | Ag5G00350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 22,671.07 Da | 27.84 | 91.34 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 106 | 182 | 1.22E-7 | IPR015300 |
| Gene3D | G3DSA:2.40.330.10 | - | 87 | 191 | 1.1E-7 | IPR015300 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_017233686.1 | PREDICTED: uncharacterized protein LOC108207767 [Daucus carota subsp. sativus] | 0 |
| TrEMBL | A0A175YB73 | TF-B3 domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_032157 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 54 | Ag10G00036, Ag10G00367, Ag10G00397, Ag10G00497, Ag10G00882 ... |