halophFGD

Basic Information

Locus ID: Ag4G02777

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: Protein kinase domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr4	310031924	310034209	-	Ag4G02777

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.32	52,634.04 Da	56.79	76.75	-0.49

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	245	327	3.4E-13	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	221	427	4.76E-30	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	322	431	1.0E-9	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	210	314	2.3E-30	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	239	470	12.216737	IPR000719
MobiDBLite	mobidb-lite	consensus disorder prediction	25	64	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	440	470	-	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G56790.1	Protein kinase superfamily protein.
RefSeq	XP_017242982.1	PREDICTED: inactive protein kinase SELMODRAFT_444075-like [Daucus carota subsp. sativus]
Swiss-Prot	P0DH62	Inactive protein kinase SELMODRAFT_444075 OS=Selaginella moellendorffii OX=88036 GN=SELMODRAFT_444075 PE=2 SV=1
TrEMBL	A0A165ZH18	Protein kinase domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_008781 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	5.150993	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	6.519986	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	3.692574	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	4.379726	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	3.365619	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	1.551224	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	2.848693	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	1.014904	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	8.22539	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	6.587395	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	8.163267	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	9.283195	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	6.929915	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	7.968389	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	3.582585	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	4.324028	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	3.647424	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	11.839931	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	10.364177	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	3.737594	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	2.913371	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	1.550312	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	0.785698	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	2.212451	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	2.378301	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	7.164696	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	11.479492	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	6.308217	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	3.663198	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	0.356453		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	1.767797		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	0.971362		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	4.719256		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	8.805434		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	5.417187		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	2.326331		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	0.682362		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	0.467144		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	2.704249	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	0.767387	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	0.279449	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	0.549937	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	2.676553	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	11.105664	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	10.297944	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	1.389045	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	7.581919	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	27.739136	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	22.796179	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	25.577532	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	1	jg22820
Aizoaceae	Mesembryanthemum crystallinum	1	gene_22611
Amaranthaceae	Atriplex hortensis	1	Ah023882
Amaranthaceae	Beta vulgaris	1	BVRB_1g013230
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg39502, Sbi_jg54832
Amaranthaceae	Salicornia europaea	1	Seu_jg14829
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00016953
Amaranthaceae	Suaeda glauca	3	Sgl12862, Sgl18103, Sgl18104
Amaranthaceae	Chenopodium album	1	gene:ENSEOMG00000033227
Amaranthaceae	Chenopodium quinoa	2	CQ.Regalona.r1.1AG0019780, CQ.Regalona.r1.1BG0005010
Anacardiaceae	Pistacia vera	1	pistato.v30045930
Apiaceae	Apium graveolens	2	Ag4G02777, Ag4G02778
Asteraceae	Flaveria trinervia	1	Ftri18G11765
Casuarinaceae	Casuarina equisetifolia	1	Ceq03G1670
Casuarinaceae	Casuarina glauca	1	Cgl03G1793
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno06g00380
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG03.2586, evm.TU.LG06.513
Plantaginaceae	Plantago ovata	1	Pov_00026811
Plumbaginaceae	Limonium bicolor	1	Lb1G07656
Portulacaceae	Portulaca oleracea	2	evm.TU.LG04.1195, evm.TU.LG05.1732
Rhizophoraceae	Bruguiera sexangula	1	evm.TU.Scaffold_7_RagTag.518
Rhizophoraceae	Carallia pectinifolia	1	nbisL1-mrna-19108
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-15586, nbisL1-mrna-9818
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-12978, nbisL1-mrna-21873
Rhizophoraceae	Kandelia candel	1	evm.TU.utg000002l.528
Rhizophoraceae	Kandelia obovata	1	Maker00011556
Rhizophoraceae	Rhizophora apiculata	1	nbisL1-mrna-5835
Rhizophoraceae	Rhizophora mangle	1	nbisL1-mrna-12456
Solanaceae	Lycium barbarum	1	gene-LOC132627937
Solanaceae	Solanum pennellii	1	gene-LOC107018003
Tamaricaceae	Reaumuria soongarica	1	gene_1201
Tamaricaceae	Tamarix chinensis	1	TC04G2332