Basic Information
Locus ID:
Ag4G02624
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
rem39,vrn1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 306166202 | 306183030 | - | Ag4G02624 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.36 | 24,016.86 Da | 29.23 | 95.42 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10017 | B3_DNA | 146 | 198 | 2.7845E-8 | IPR003340 |
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 91 | 196 | 7.85E-11 | IPR015300 |
| Gene3D | G3DSA:2.40.330.10 | - | 77 | 200 | 1.6E-9 | IPR015300 |
| ProSiteProfiles | PS50863 | B3 DNA-binding domain profile. | 146 | 200 | 9.093296 | IPR003340 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_017221326.1 | PREDICTED: uncharacterized protein LOC108198056 [Daucus carota subsp. sativus] | 0 |
| TrEMBL | A0A175YBE8 | TF-B3 domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_031503 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 54 | Ag10G00036, Ag10G00367, Ag10G00397, Ag10G00497, Ag10G00882 ... |