halophFGD

Basic Information

Locus ID: Ag4G02200

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Short Name: BRL2

Description: Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr4	286550428	286550754	-	Ag4G02200

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.47	11,998.43 Da	35.09	102.87	-0.09

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF13516	Leucine Rich repeat	14	28	0.29	IPR001611
Pfam	PF00560	Leucine Rich Repeat	40	60	0.65	IPR001611
SUPERFAMILY	SSF52058	L domain-like	7	104	2.72E-26	-
Gene3D	G3DSA:3.30.1490.310	-	1	11	3.8E-43	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	12	106	3.8E-43	IPR032675
PRINTS	PR00019	Leucine-rich repeat signature	85	98	1.3E-5	-
PRINTS	PR00019	Leucine-rich repeat signature	16	29	1.3E-5	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K13415 (protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1])

Pathway:

ko04075 (Plant hormone signal transduction) map04075 (Plant hormone signal transduction)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G01950.1	BRI1-like 2. Encodes a leucine rich repeat receptor kinase and associated with provascular/procambial cells. Similar to BRI, brassinosteroid receptor protein.
RefSeq	XP_017215343.1	PREDICTED: serine/threonine-protein kinase BRI1-like 2 [Daucus carota subsp. sativus]
Swiss-Prot	Q9ZPS9	Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana OX=3702 GN=BRL2 PE=1 SV=1
TrEMBL	A0A161ZK91	non-specific serine/threonine protein kinase OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_023534 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	0	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	0	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	0	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	0	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	0.145057	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	0	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	0	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	0	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	0	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	0	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	0	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	0	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	0	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	0	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	0	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	0	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	0	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	0	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	0	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	0	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	0	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	0	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	0	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	0	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	0	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	0	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	0	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	0	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	0	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	0		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	0		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	0		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	0		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	0		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	0		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	0		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	0		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	0		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	0	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	0	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	0	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	0	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	0	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	0	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	0	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	0	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	0	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	0	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	0	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	0	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	5	jg16969, jg20134, jg20597, jg39452, jg5096
Aizoaceae	Mesembryanthemum crystallinum	2	gene_13304, gene_17787
Amaranthaceae	Atriplex hortensis	3	Ah026997, Ah027172, Ah035268
Amaranthaceae	Beta vulgaris	2	BVRB_2g024180, BVRB_6g131900
Amaranthaceae	Salicornia bigelovii	6	Sbi_jg13558, Sbi_jg21385, Sbi_jg22467, Sbi_jg30918 ... Sbi_jg52335, Sbi_jg58360
Amaranthaceae	Salicornia europaea	3	Seu_jg16345, Seu_jg25960, Seu_jg9522
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00016421, GOSA_00017518, GOSA_00023162
Amaranthaceae	Suaeda glauca	6	Sgl33353, Sgl33704, Sgl38707, Sgl39015, Sgl62901, Sgl67514
Amaranthaceae	Chenopodium album	8	gene:ENSEOMG00000000128, gene:ENSEOMG00000001631 ... gene:ENSEOMG00000003080, gene:ENSEOMG00000003519, gene:ENSEOMG00000020379, gene:ENSEOMG00000025380, gene:ENSEOMG00000028073, gene:ENSEOMG00000049354
Amaranthaceae	Chenopodium quinoa	6	CQ.Regalona.r1.1BG0019470, CQ.Regalona.r1.2AG0021170 ... CQ.Regalona.r1.6AG0021280, CQ.Regalona.r1.6AG0022780, CQ.Regalona.r1.6BG0022460, CQ.Regalona.r1.6BG0024100
Anacardiaceae	Pistacia vera	3	pistato.v30043920, pistato.v30150980, pistato.v30219230
Apiaceae	Apium graveolens	5	Ag3G01242, Ag3G02408, Ag4G02200, Ag7G02272, Ag8G01911
Arecaceae	Cocos nucifera	6	COCNU_01G006760, COCNU_02G000700, COCNU_05G009110 ... COCNU_06G001450, COCNU_11G010960, COCNU_14G000730
Arecaceae	Phoenix dactylifera	6	gene-LOC103696970, gene-LOC103702338, gene-LOC103704826 ... gene-LOC103710640, gene-LOC103713759, gene-LOC103720660
Asparagaceae	Asparagus officinalis	4	AsparagusV1_01.2219.V1.1, AsparagusV1_03.1255.V1.1 ... AsparagusV1_05.1187.V1.1, AsparagusV1_08.577.V1.1
Asteraceae	Flaveria trinervia	4	Ftri12G24194, Ftri12G31250, Ftri15G22334, Ftri17G02835
Brassicaceae	Arabidopsis thaliana	4	AT1G55610.1, AT2G01950.1, AT3G13380.1, AT4G39400.1
Brassicaceae	Eutrema salsugineum	4	Thhalv10003548m.g.v1.0, Thhalv10011192m.g.v1.0 ... Thhalv10019932m.g.v1.0, Thhalv10024249m.g.v1.0
Brassicaceae	Schrenkiella parvula	4	Sp1g41230.v2.2, Sp2g13390.v2.2, Sp3g11570.v2.2 ... Sp7g36460.v2.2
Brassicaceae	Brassica nigra	5	BniB01g051820.2N, BniB02g065260.2N, BniB03g015200.2N ... BniB05g000520.2N, BniB07g000790.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq01G1580, Ceq06G1844
Casuarinaceae	Casuarina glauca	3	Cgl01G1743, Cgl06G1908, Cgl09G0901
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno06g09320, gene.Cymno12g00570, gene.Cymno16g00720
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate03g19520, gene.Thate05g25160, gene.Thate09g18080
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-7279
Nitrariaceae	Nitraria sibirica	3	evm.TU.LG02.779, evm.TU.LG03.1129, evm.TU.LG05.2132
Plantaginaceae	Plantago ovata	3	Pov_00004331, Pov_00020870, Pov_00025891
Plumbaginaceae	Limonium bicolor	2	Lb1G06042, Lb4G25660
Poaceae	Echinochloa crus-galli	1	CH08.1273
Poaceae	Eleusine coracana subsp. coracana	9	gene-QOZ80_1AG0031240, gene-QOZ80_1BG0081200 ... gene-QOZ80_2AG0119340, gene-QOZ80_2BG0174110, gene-QOZ80_6AG0520910, gene-QOZ80_6BG0473390, gene-QOZ80_8AG0627020, gene-QOZ80_8AG0627030, gene-QOZ80_8BG0655710
Poaceae	Hordeum vulgare	3	HORVU.MOREX.r3.3HG0235070.1.CDS1 ... HORVU.MOREX.r3.3HG0285210.1.CDS1, HORVU.MOREX.r3.5HG0471560.1.CDS1
Poaceae	Lolium multiflorum	2	gene-QYE76_004382, gene-QYE76_054950
Poaceae	Oryza coarctata	6	Oco01G020520, Oco02G019250, Oco16G006440, Oco17G001930 ... Oco18G001830, Oco19G000240
Poaceae	Oryza sativa	4	LOC_Os01g52050.1, LOC_Os08g25380.1, LOC_Os09g12240.1 ... LOC_Os10g02500.1
Poaceae	Paspalum vaginatum	4	gene-BS78_01G267200, gene-BS78_02G140500 ... gene-BS78_03G257300, gene-BS78_09G256400
Poaceae	Puccinellia tenuiflora	4	Pt_Chr0500404, Pt_Chr0602728, Pt_Chr0602860, Pt_Chr0702726
Poaceae	Sporobolus alterniflorus	11	Chr02G011190, Chr02G012090, Chr03G015010, Chr05G022490 ... Chr06G021770, Chr08G015100, Chr0G030680, Chr11G015700, Chr15G017360, Chr21G006730, Chr29G007540
Poaceae	Thinopyrum elongatum	3	Tel3E01G173400, Tel3E01G416500, Tel5E01G300700
Poaceae	Triticum dicoccoides	6	gene_TRIDC3AG012010, gene_TRIDC3AG036670 ... gene_TRIDC3BG016160, gene_TRIDC3BG041310, gene_TRIDC5AG028880, gene_TRIDC5BG030350
Poaceae	Triticum aestivum	9	TraesCS3A02G099400.1.cds1, TraesCS3A02G245000.1.cds1 ... TraesCS3B02G115800.1.cds1, TraesCS3B02G275000.1.cds1, TraesCS3D02G099700.1.cds1, TraesCS3D02G246500.1.cds1, TraesCS5A02G177300.1.cds1, TraesCS5B02G174400.1.cds1, TraesCS5D02G181500.1.cds1
Poaceae	Zea mays	5	Zm00001eb026010_P001, Zm00001eb154730_P001 ... Zm00001eb177520_P001, Zm00001eb309030_P001, Zm00001eb361520_P001
Poaceae	Zoysia japonica	5	nbis-gene-12750, nbis-gene-26311, nbis-gene-28793 ... nbis-gene-43830, nbis-gene-53180
Poaceae	Zoysia macrostachya	5	Zma_g11019, Zma_g15818, Zma_g29683, Zma_g31885, Zma_g8534
Portulacaceae	Portulaca oleracea	4	evm.TU.LG03.2364, evm.TU.LG07.323, evm.TU.LG15.634 ... evm.TU.LG17.1410
Posidoniaceae	Posidonia oceanica	4	gene.Posoc02g22660, gene.Posoc03g09820, gene.Posoc07g05710 ... gene.Posoc09g11180
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_17_RagTag.717, evm.TU.Scaffold_3_RagTag.1028 ... evm.TU.Scaffold_6_RagTag.1611, evm.TU.Scaffold_7_RagTag.3
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-17573, nbisL1-mrna-19750, nbisL1-mrna-23409
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-10201, nbisL1-mrna-12590, nbisL1-mrna-17770 ... nbisL1-mrna-19847
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-12169, nbisL1-mrna-20030, nbisL1-mrna-22391 ... nbisL1-mrna-2296
Rhizophoraceae	Kandelia candel	4	add.evm.TU.utg000011l.382, add.evm.TU.utg000013l.133 ... add.evm.TU.utg000019l.277, add.evm.TU.utg000028l.1
Rhizophoraceae	Kandelia obovata	2	Maker00004508, Maker00007000
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-19939, nbisL1-mrna-21027, nbisL1-mrna-22836 ... nbisL1-mrna-22860
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-14331, nbisL1-mrna-1719, nbisL1-mrna-22537 ... nbisL1-mrna-4469
Salicaceae	Populus euphratica	6	populus_peu00004, populus_peu07264, populus_peu13880 ... populus_peu17081, populus_peu21261, populus_peu23048
Solanaceae	Lycium barbarum	3	gene-LOC132614975, gene-LOC132615004, gene-LOC132616627
Solanaceae	Solanum chilense	4	SOLCI002088200, SOLCI002216100, SOLCI002599500 ... SOLCI004292600
Solanaceae	Solanum pennellii	4	gene-LOC107015854, gene-LOC107017735, gene-LOC107024267 ... gene-LOC107027997
Tamaricaceae	Reaumuria soongarica	3	STRG.19650_chr07_-, STRG.5156_chr03_-, gene_2243
Tamaricaceae	Tamarix chinensis	3	TC03G0328, TC04G0446, TC11G0356
Zosteraceae	Zostera marina	5	Zosma01g05850.v3.1, Zosma03g14440.v3.1, Zosma03g14450.v3.1 ... Zosma05g14380.v3.1, Zosma05g25890.v3.1