halophFGD

Basic Information

Locus ID: Ag4G02128

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: Belongs to the heat shock protein 70 family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr4	281827044	281833028	+	Ag4G02128

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.30	100,164.17 Da	42.18	90.89	-0.39

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd10230	HYOU1-like_NBD	30	420	4.56967E-174	-
Pfam	PF00012	Hsp70 protein	31	742	2.8E-94	IPR013126
SUPERFAMILY	SSF53067	Actin-like ATPase domain	220	422	4.92E-40	IPR043129
SUPERFAMILY	SSF53067	Actin-like ATPase domain	30	214	4.21E-37	IPR043129
SUPERFAMILY	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain	669	750	4.12E-17	IPR029048
Gene3D	G3DSA:3.30.420.40	-	215	405	1.1E-108	-
Gene3D	G3DSA:1.20.1270.10	-	642	754	1.7E-25	IPR029048
Gene3D	G3DSA:2.60.34.10	Substrate Binding Domain Of DNAk; Chain A, domain 1	430	571	4.2E-11	IPR029047
Gene3D	G3DSA:3.30.420.40	-	31	420	1.1E-108	-
Gene3D	G3DSA:3.90.640.10	Actin; Chain A, domain 4	269	354	1.1E-108	-
ProSitePatterns	PS01036	Heat shock hsp70 proteins family signature 3.	376	390	-	IPR018181
PRINTS	PR00301	70kDa heat shock protein signature	405	425	1.4E-14	-
PRINTS	PR00301	70kDa heat shock protein signature	27	40	1.4E-14	-
PRINTS	PR00301	70kDa heat shock protein signature	373	389	1.4E-14	-
PRINTS	PR00301	70kDa heat shock protein signature	59	71	1.4E-14	-
PRINTS	PR00301	70kDa heat shock protein signature	169	189	1.4E-14	-
MobiDBLite	mobidb-lite	consensus disorder prediction	858	890	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	570	595	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	838	857	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	835	899	-	-

Gene Ontology

Molecular Function:

GO:0005524 (ATP binding) GO:0016887 (ATP hydrolysis activity)

KEGG Pathway

KO Term:

K09486 (hypoxia up-regulated 1)

Pathway:

ko04141 (Protein processing in endoplasmic reticulum) map04141 (Protein processing in endoplasmic reticulum)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G16660.1	heat shock protein 70 (Hsp 70) family protein.
RefSeq	XP_017240820.1	PREDICTED: heat shock 70 kDa protein 17-like [Daucus carota subsp. sativus]
Swiss-Prot	F4JMJ1	Heat shock 70 kDa protein 17 OS=Arabidopsis thaliana OX=3702 GN=HSP70-17 PE=2 SV=1
TrEMBL	A0A166ADA7	Heat shock 70 kDa protein 17 OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_009834 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	17.597935	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	4.029455	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	3.125175	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	2.844794	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	2.33318	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	1.360128	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	1.728755	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	1.49935	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	0.617302	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	1.018947	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	0.732395	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	1.652094	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	2.104767	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	1.820908	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	0.698456	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	0.733537	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	1.057403	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	1.298813	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	0.43969	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	0.16096	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	1.047629	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	0.224844	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	1.662201	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	1.647822	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	1.4895	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	0.146041	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	0.394416	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	0.107408	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	0.309891	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	0		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	0		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	0		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	0.044496		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	1.020822		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	0		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	0		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	0		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	0		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	0	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	0	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	0	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	1.00475	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	0.399615	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	0	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	0.136264	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	0.1468	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	0.138177	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	1.824867	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	1.491328	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	0.720165	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	1	jg24110
Aizoaceae	Mesembryanthemum crystallinum	1	gene_13423
Amaranthaceae	Atriplex hortensis	1	Ah000054
Amaranthaceae	Beta vulgaris	1	BVRB_5g122530
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg31242, Sbi_jg58024
Amaranthaceae	Salicornia europaea	1	Seu_jg25658
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00004528, GOSA_00004529
Amaranthaceae	Suaeda glauca	2	Sgl54595, Sgl59929
Amaranthaceae	Chenopodium album	3	gene:ENSEOMG00000004347, gene:ENSEOMG00000020016 ... gene:ENSEOMG00000026898
Amaranthaceae	Chenopodium quinoa	2	CQ.Regalona.r1.5AG0027480, CQ.Regalona.r1.5BG0029100
Anacardiaceae	Pistacia vera	1	pistato.v30279880
Apiaceae	Apium graveolens	3	Ag3G00572, Ag4G00703, Ag4G02128
Arecaceae	Cocos nucifera	1	COCNU_05G009480
Arecaceae	Phoenix dactylifera	1	gene-LOC103701937
Asparagaceae	Asparagus officinalis	5	AsparagusV1_01.2476.V1.1, AsparagusV1_03.2657.V1.1 ... AsparagusV1_06.653.V1.1, AsparagusV1_06.654.V1.1, AsparagusV1_07.641.V1.1
Asteraceae	Flaveria trinervia	2	Ftri13G05419, Ftri3G08320
Brassicaceae	Arabidopsis thaliana	1	AT4G16660.1
Brassicaceae	Eutrema salsugineum	1	Thhalv10024376m.g.v1.0
Brassicaceae	Schrenkiella parvula	1	Sp7g15270.v2.2
Brassicaceae	Brassica nigra	2	BniB02g073050.2N, BniB05g019630.2N
Casuarinaceae	Casuarina equisetifolia	1	Ceq02G2961
Casuarinaceae	Casuarina glauca	1	Cgl02G3075
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno03g00120
Dunaliellaceae	Dunaliella salina	2	Dusal.0079s00021.v1.0, Dusal.0079s00022.v1.0
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate06g01850
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-3697
Nitrariaceae	Nitraria sibirica	1	evm.TU.LG01.1856
Plantaginaceae	Plantago ovata	1	Pov_00001316
Plumbaginaceae	Limonium bicolor	2	Lb2G13402, Lb5G28139
Poaceae	Echinochloa crus-galli	3	AH07.3186, BH07.3018, CH07.3094
Poaceae	Eleusine coracana subsp. coracana	2	gene-QOZ80_2AG0143020, gene-QOZ80_2BG0198410
Poaceae	Hordeum vulgare	1	HORVU.MOREX.r3.6HG0608780.1
Poaceae	Lolium multiflorum	2	gene-QYE76_024227, gene-QYE76_024743
Poaceae	Oryza coarctata	1	Oco03G019600
Poaceae	Oryza sativa	1	LOC_Os02g48110.1
Poaceae	Paspalum vaginatum	1	gene-BS78_04G251200
Poaceae	Puccinellia tenuiflora	2	Pt_Chr0203652, Pt_Chr0206883
Poaceae	Sporobolus alterniflorus	2	Chr06G003890, Chr09G021950
Poaceae	Thinopyrum elongatum	4	Tel1E01G347600, Tel3E01G465100, Tel3E01G911900 ... Tel6E01G506400
Poaceae	Triticum dicoccoides	5	gene_TRIDC3AG020050, gene_TRIDC6AG042320 ... gene_TRIDC6BG049400, gene_TRIDC7AG065910, gene_TRIDC7BG064170
Poaceae	Triticum aestivum	4	TraesCS1B02G206700.1, TraesCS6A02G276700.1 ... TraesCS6B02G304200.1, TraesCS6D02G257000.1
Poaceae	Zea mays	3	Zm00001eb188700_P002, Zm00001eb188750_P002 ... Zm00001eb252410_P003
Poaceae	Zoysia japonica	2	nbis-gene-22061, nbis-gene-8945
Poaceae	Zoysia macrostachya	2	Zma_g14259, Zma_g17004
Portulacaceae	Portulaca oleracea	2	evm.TU.LG02.1301, evm.TU.LG09.673
Posidoniaceae	Posidonia oceanica	6	gene.Posoc01g01670, gene.Posoc01g35940, gene.Posoc02g02840 ... gene.Posoc06g01580, gene.Posoc06g14630, gene.Posoc09g06030
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_7_RagTag.1534, evm.TU.Scaffold_8_RagTag.266
Rhizophoraceae	Carallia pectinifolia	1	nbisL1-mrna-19942
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-13660, nbisL1-mrna-19352
Rhizophoraceae	Ceriops zippeliana	1	nbisL1-mrna-13469
Rhizophoraceae	Kandelia candel	2	evm.TU.utg000002l.159, evm.TU.utg000018l.818
Rhizophoraceae	Kandelia obovata	1	Maker00011958
Rhizophoraceae	Rhizophora apiculata	1	nbisL1-mrna-13149
Rhizophoraceae	Rhizophora mangle	1	nbisL1-mrna-12227
Salicaceae	Populus euphratica	2	populus_peu10701, populus_peu26414
Solanaceae	Lycium barbarum	1	gene-LOC132617909
Solanaceae	Solanum chilense	1	SOLCI002825700
Solanaceae	Solanum pennellii	1	gene-LOC107026092
Tamaricaceae	Reaumuria soongarica	1	STRG.17579_chr09_-
Tamaricaceae	Tamarix chinensis	1	TC07G2802
Zosteraceae	Zostera marina	1	Zosma06g21400.v3.1