Basic Information
Locus ID:
Ag4G01480
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 201043399 | 201066749 | + | Ag4G01480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.88 | 107,704.13 Da | 41.73 | 105.07 | 0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 53 | 122 | 8.20935E-7 | - |
| Pfam | PF00651 | BTB/POZ domain | 53 | 136 | 7.9E-6 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 153 | 249 | 3.8E-9 | IPR011705 |
| SUPERFAMILY | SSF54695 | POZ domain | 53 | 136 | 2.35E-10 | IPR011333 |
| SUPERFAMILY | SSF52047 | RNI-like | 698 | 922 | 1.04E-19 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 468 | 766 | 1.88E-13 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 689 | 952 | 4.5E-24 | IPR032675 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 43 | 164 | 2.8E-11 | IPR011333 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 365 | 665 | 6.2E-22 | IPR032675 |
| Gene3D | G3DSA:1.25.40.420 | - | 173 | 274 | 2.1E-6 | - |
| SMART | SM00367 | LRR_CC_2 | 806 | 831 | 21.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 470 | 495 | 230.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 779 | 805 | 22.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 496 | 520 | 370.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 832 | 857 | 110.0 | IPR006553 |
| SMART | SM00875 | BACK_2 | 152 | 255 | 1.8E-7 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 29 | 109 | 9.475402 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G36370.1 | ubiquitin-protein ligases. | 0 |
| RefSeq | XP_017243087.1 | PREDICTED: BTB/POZ domain-containing protein FBL11 isoform X1 [Daucus carota subsp. sativus] | 0 |
| Q8S8F2 | BTB/POZ domain-containing protein FBL11 OS=Arabidopsis thaliana OX=3702 GN=FBL11 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5B7AY74 | Putative BTB/POZ domain-containing protein FBL11 isoform X1 (Fragment) OS=Davidia involucrata OX=16924 GN=Din_031128 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| PRJNA723697 | SRX10692252 | 7.114043 | Shengqin NO.2 | seed | S1-1 | S1-1 | initial formation stage (S1) |
| PRJNA723697 | SRX10692254 | 4.994963 | Shengqin NO.2 | seed | S1-3 | S1-3 | initial formation stage (S1) |
| PRJNA723697 | SRX10692255 | 4.490701 | Shengqin NO.2 | seed | S3-1 | S3-1 | middle development stage (S3) |
| PRJNA723697 | SRX10692256 | 6.16767 | Shengqin NO.2 | seed | S3-2 | S3-2 | middle development stage (S3) |
| PRJNA723697 | SRX10692257 | 6.246 | Shengqin NO.2 | seed | S3-3 | S3-3 | middle development stage (S3) |
| PRJNA723697 | SRX10692258 | 5.191054 | Shengqin NO.2 | seed | S5-1 | S5-1 | maturation stage (S5) |
| PRJNA723697 | SRX10692259 | 4.91968 | Shengqin NO.2 | seed | S5-2 | S5-2 | maturation stage (S5) |
| PRJNA723697 | SRX10692260 | 3.068568 | Shengqin NO.2 | seed | S5-3 | S5-3 | maturation stage (S5) |
| PRJNA884666 | SRX17729272 | 15.465615 | celery | anther | W99A-r1 | male sterile line | |
| PRJNA884666 | SRX17729273 | 17.332151 | celery | anther | W99A-r2 | male sterile line | |
| PRJNA884666 | SRX17729274 | 16.32069 | celery | anther | W99A-r3 | male sterile line | |
| PRJNA884666 | SRX17729275 | 12.864518 | celery | anther | W99B-r1 | maintainer line | |
| PRJNA884666 | SRX17729276 | 13.507237 | celery | anther | W99B-r2 | maintainer line | |
| PRJNA884666 | SRX17729277 | 10.910333 | celery | anther | W99B-r3 | maintainer line | |
| PRJNA884180 | SRX17743889 | 13.905922 | var. secalinum Yablochny | collenchyma | Col_S1_rep1-1 | ||
| PRJNA884180 | SRX17748056 | 13.811631 | var. secalinum Yablochny | collenchyma | Col_S1_rep3 | biological replicate 3 | |
| PRJNA884180 | SRX17748057 | 14.909145 | var. secalinum Yablochny | collenchyma | Col_S1_rep4 | biological replicate 4 | |
| PRJNA884180 | SRX17748678 | 16.88739 | var. secalinum Yablochny | parenchyma | Par_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17748679 | 13.144172 | var. secalinum Yablochny | parenchyma | Par_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17748680 | 12.686235 | var. secalinum Yablochny | parenchyma | Par_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17748681 | 18.258211 | var. secalinum Yablochny | parenchyma | Par_S1_rep4 | Biological replicate 4 | |
| PRJNA884180 | SRX17748898 | 15.65317 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17748899 | 16.934443 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17748900 | 16.756956 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17748901 | 15.10445 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep4 | Biological replicate 4 | |
| PRJNA884180 | SRX17749129 | 14.361733 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17749130 | 13.722135 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17749131 | 13.440798 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17749132 | 15.553084 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep4 | Biological replicate 4 | |
| PRJNA1124269 | SRX24936411 | 1.126334 | leaf | CK1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936412 | 1.993023 | leaf | CK2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936413 | 1.410793 | leaf | CK3 | replicate=biological replicate3 | ||
| PRJNA1124269 | SRX24936414 | 6.142173 | leaf | D1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936415 | 5.975028 | leaf | D2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936416 | 6.213556 | leaf | D3 | replicate=biological replicate3 | ||
| PRJNA1124269 | SRX24936417 | 4.523272 | leaf | MD1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936418 | 2.822243 | leaf | MD2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936419 | 3.220188 | leaf | MD3 | replicate=biological replicate3 | ||
| PRJNA387092 | SRX2833309 | 5.673066 | shanghaihuangxin | leaf | leaves between 0.5 and 1 cm in breadth, folded; | stage 2 | |
| PRJNA387092 | SRX2833321 | 6.592747 | shanghaihuangxin | leaf | leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion | stage 5 | |
| PRJNA387092 | SRX2833323 | 3.759053 | shanghaihuangxin | leaf | leaves >3 cm, unfolded, with clearstem extension | stage 7 | |
| PRJNA543957 | SRX5879598 | 8.472793 | Zhangzhou lvqing | stem | Se3 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879599 | 11.441501 | Zhangzhou lvqing | stem | Se2 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879600 | 18.824682 | Zhangzhou lvqing | stem | Mock2 | mock | |
| PRJNA543957 | SRX5879601 | 14.031163 | Zhangzhou lvqing | stem | Mock1 | mock | |
| PRJNA543957 | SRX5879602 | 7.755432 | Zhangzhou lvqing | stem | Se1 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879603 | 18.166451 | Zhangzhou lvqing | stem | Mock3 | mock | |
| PRJNA609149 | SRX7815917 | 12.930807 | Jinnan Shiqin | flower bud | early flower bud | early flower bud | |
| PRJNA609149 | SRX7815918 | 13.988871 | Jinnan Shiqin | flower bud | middle flower bud | middle flower bud | |
| PRJNA609149 | SRX7815919 | 12.691944 | Jinnan Shiqin | flower bud | early flowering period | early flowering period |
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg31967 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_14434 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah031001 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_7g159950 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg27352, Sbi_jg33097 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg7849 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00012250 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl71441, Sgl75029 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000006385, gene:ENSEOMG00000036350 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.7BG0022610 |
| Apiaceae | Apium graveolens | 1 | Ag4G01480 |
| Arecaceae | Cocos nucifera | 1 | COCNU_15G000040 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103706161 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_09.9.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri13G29101 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT2G36370.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10017885m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp4g18660.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB01g008100.2N, BniB01p000012.2N |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq02G1479, Ceq02G1480 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G1537 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno08g08770 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate06g11230 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.2099 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00004885 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb2G09722 |
| Poaceae | Echinochloa crus-galli | 3 | AH02.4637, BH02.4703, Contig926_1.11 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_1BG0097920, gene-QOZ80_1BG0097930 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0327040.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_058529 |
| Poaceae | Oryza coarctata | 2 | Oco01G030880, Oco02G032020 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g73750.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G416700 |
| Poaceae | Puccinellia tenuiflora | 4 | Pt_Chr0103017, Pt_Chr0304368, Pt_Chr0304443, Pt_Chr0601025 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr02G000310, Chr05G034500 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G873700 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC3AG073610, gene_TRIDC3BG084860 |
| Poaceae | Triticum aestivum | 4 | TraesCS3A02G520000.4, TraesCS3B02G587700.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb139990_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-28068 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g12006 |
| Portulacaceae | Portulaca oleracea | 3 | evm.TU.LG02.1735, evm.TU.LG02.1736, evm.TU.LG09.192 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc05g22730 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.1439 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-6153 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-4515 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000016l.469 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00016945 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-7643 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-445 |
| Solanaceae | Solanum chilense | 1 | SOLCI003411700 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107031859 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_5675 |
| Tamaricaceae | Tamarix chinensis | 1 | TC02G2499 |