HalophFGD

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Basic Information
Locus ID: Ag4G01018
Species & Taxonomic ID: Apium graveolens & 4045
Genome Assembly: GCA_009905375.1
Short Name: CIPK2
Description: Non-specific serine threonine protein kinase
Maps and Mapping Data
Chromosome Start End Strand ID
chr4 106802557 106805028 + Ag4G01018
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.71 50,023.62 Da 33.74 93.23 -0.26
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd14663 STKc_SnRK3 11 265 7.63526E-168 -
CDD cd12195 CIPK_C 311 424 4.0359E-40 -
Pfam PF03822 NAF domain 310 365 3.1E-18 IPR004041
Pfam PF00069 Protein kinase domain 12 266 8.0E-77 IPR000719
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 8 267 7.28E-94 IPR011009
Gene3D G3DSA:3.30.310.80 Kinase associated domain 1, KA1 306 429 2.9E-37 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 8 93 8.8E-31 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 94 269 8.6E-60 -
SMART SM00220 serkin_6 12 266 9.8E-111 IPR000719
ProSiteProfiles PS50816 NAF domain profile. 305 329 12.144578 IPR018451
ProSiteProfiles PS50011 Protein kinase domain profile. 12 266 52.753048 IPR000719
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 130 142 - IPR008271
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 18 41 - IPR017441
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation) GO:0007165 (signal transduction)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K07198 (5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.31])
Pathway:
ko04068 (FoxO signaling pathway) map04068 (FoxO signaling pathway) ko04140 (Autophagy - animal) map04140 (Autophagy - animal) ko04150 (mTOR signaling pathway) map04150 (mTOR signaling pathway) ko04151 (PI3K-Akt signaling pathway) map04151 (PI3K-Akt signaling pathway) ko04152 (AMPK signaling pathway) map04152 (AMPK signaling pathway) ko04211 (Longevity regulating pathway) map04211 (Longevity regulating pathway) ko04213 (Longevity regulating pathway - multiple species) map04213 (Longevity regulating pathway - multiple species) ko04371 (Apelin signaling pathway) map04371 (Apelin signaling pathway) ko04710 (Circadian rhythm)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G58380.1 SOS3-interacting protein 1. Encodes a CBL-interacting protein kinase with similarity to SOS protein kinase. 0
RefSeq XP_017241473.1 PREDICTED: CBL-interacting protein kinase 18-like isoform X3 [Daucus carota subsp. sativus] 0
Swiss-Prot Q7X996 CBL-interacting protein kinase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CIPK2 PE=2 SV=1 0
TrEMBL A0A6P6A8Z6 non-specific serine/threonine protein kinase OS=Durio zibethinus OX=66656 GN=LOC111307631 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
PRJNA723697SRX106922521.938226Shengqin NO.2seedS1-1S1-1initial formation stage (S1)
PRJNA723697SRX106922542.066611Shengqin NO.2seedS1-3S1-3initial formation stage (S1)
PRJNA723697SRX106922551.371087Shengqin NO.2seedS3-1S3-1middle development stage (S3)
PRJNA723697SRX106922562.570606Shengqin NO.2seedS3-2S3-2middle development stage (S3)
PRJNA723697SRX106922572.993351Shengqin NO.2seedS3-3S3-3middle development stage (S3)
PRJNA723697SRX106922582.506322Shengqin NO.2seedS5-1S5-1maturation stage (S5)
PRJNA723697SRX106922592.055278Shengqin NO.2seedS5-2S5-2maturation stage (S5)
PRJNA723697SRX106922601.774522Shengqin NO.2seedS5-3S5-3maturation stage (S5)
PRJNA884666SRX177292726.310088celeryantherW99A-r1male sterile line 
PRJNA884666SRX177292737.329495celeryantherW99A-r2male sterile line 
PRJNA884666SRX177292749.338778celeryantherW99A-r3male sterile line 
PRJNA884666SRX177292756.79108celeryantherW99B-r1maintainer line
PRJNA884666SRX177292768.752747celeryantherW99B-r2maintainer line
PRJNA884666SRX177292777.525085celeryantherW99B-r3maintainer line
PRJNA884180SRX177438892.967204var. secalinum YablochnycollenchymaCol_S1_rep1-1
PRJNA884180SRX177480562.786828var. secalinum YablochnycollenchymaCol_S1_rep3biological replicate 3
PRJNA884180SRX177480572.530918var. secalinum YablochnycollenchymaCol_S1_rep4biological replicate 4
PRJNA884180SRX177486782.84107var. secalinum YablochnyparenchymaPar_S1_rep1Biological replicate 1
PRJNA884180SRX177486791.715397var. secalinum YablochnyparenchymaPar_S1_rep2Biological replicate 2
PRJNA884180SRX177486802.667592var. secalinum YablochnyparenchymaPar_S1_rep3Biological replicate 3
PRJNA884180SRX177486814.203433var. secalinum YablochnyparenchymaPar_S1_rep4Biological replicate 4
PRJNA884180SRX177488986.448328var. secalinum Yablochnyvascular bundleVas_S1_rep1Biological replicate 1
PRJNA884180SRX177488994.950937var. secalinum Yablochnyvascular bundleVas_S1_rep2Biological replicate 2
PRJNA884180SRX177489003.945172var. secalinum Yablochnyvascular bundleVas_S1_rep3Biological replicate 3
PRJNA884180SRX177489014.415809var. secalinum Yablochnyvascular bundleVas_S1_rep4Biological replicate 4
PRJNA884180SRX177491294.417541var. secalinum Yablochnypart of the celery petiole without collenchyma strandsCollenchyma-free_S1_rep1Biological replicate 1
PRJNA884180SRX177491302.725773var. secalinum Yablochnypart of the celery petiole without collenchyma strandsCollenchyma-free_S1_rep2Biological replicate 2
PRJNA884180SRX177491314.434725var. secalinum Yablochnypart of the celery petiole without collenchyma strandsCollenchyma-free_S1_rep3Biological replicate 3
PRJNA884180SRX177491323.803604var. secalinum Yablochnypart of the celery petiole without collenchyma strandsCollenchyma-free_S1_rep4Biological replicate 4
PRJNA1124269SRX249364113.460436leafCK1replicate=biological replicate1
PRJNA1124269SRX249364124.21247leafCK2replicate=biological replicate2
PRJNA1124269SRX249364132.590199leafCK3replicate=biological replicate3
PRJNA1124269SRX249364149.843155leafD1replicate=biological replicate1
PRJNA1124269SRX249364155.713513leafD2replicate=biological replicate2
PRJNA1124269SRX249364169.426552leafD3replicate=biological replicate3
PRJNA1124269SRX249364178.020939leafMD1replicate=biological replicate1
PRJNA1124269SRX249364186.433753leafMD2replicate=biological replicate2
PRJNA1124269SRX249364196.011564leafMD3replicate=biological replicate3
PRJNA387092SRX28333091.337101shanghaihuangxinleafleaves between 0.5 and 1 cm in breadth, folded;stage 2
PRJNA387092SRX28333211.587521shanghaihuangxinleafleaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sionstage 5
PRJNA387092SRX28333231.244676shanghaihuangxinleafleaves >3 cm, unfolded, with clearstem extensionstage 7
PRJNA543957SRX58795984.12327Zhangzhou lvqingstemSe3100 ppm Na2SeO4
PRJNA543957SRX58795993.464035Zhangzhou lvqingstemSe2100 ppm Na2SeO4
PRJNA543957SRX58796008.429197Zhangzhou lvqingstemMock2mock
PRJNA543957SRX58796013.678175Zhangzhou lvqingstemMock1mock
PRJNA543957SRX58796023.466826Zhangzhou lvqingstemSe1100 ppm Na2SeO4
PRJNA543957SRX58796034.237689Zhangzhou lvqingstemMock3mock
PRJNA609149SRX78159175.929351Jinnan Shiqinflower budearly flower budearly flower bud
PRJNA609149SRX78159186.083629Jinnan Shiqinflower budmiddle flower budmiddle flower bud
PRJNA609149SRX78159197.715057Jinnan Shiqinflower budearly flowering periodearly flowering period
Network
🔍 Co-expression Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 16 jg12629, jg14205, jg16704, jg16705, jg18309, jg20640, jg3185 ...
jg22159, jg24962, jg25482, jg27832, jg31548, jg38047, jg38709, jg38710, jg8402
Aizoaceae Mesembryanthemum crystallinum 9 gene_12996, gene_13655, gene_14574, gene_20397, gene_21448 ...
gene_22327, gene_24366, gene_443, gene_8902
Amaranthaceae Atriplex hortensis 11 Ah009217, Ah011657, Ah017048, Ah017309, Ah028193, Ah028201 ...
Ah031442, Ah031444, Ah033391, Ah033923, Ah034676
Amaranthaceae Beta vulgaris 10 BVRB_2g029990, BVRB_2g036610, BVRB_2g037140, BVRB_7g157470 ...
BVRB_7g157500, BVRB_7g175690, BVRB_7g175720, BVRB_8g180970, BVRB_8g180980, BVRB_9g223070
Amaranthaceae Salicornia bigelovii 19 Sbi_jg11694, Sbi_jg20755, Sbi_jg20863, Sbi_jg21571 ...
Sbi_jg22246, Sbi_jg2225, Sbi_jg2228, Sbi_jg22904, Sbi_jg23004, Sbi_jg26889, Sbi_jg26893, Sbi_jg33675, Sbi_jg33680, Sbi_jg34286, Sbi_jg34288, Sbi_jg40401, Sbi_jg46706, Sbi_jg50398, Sbi_jg50399
Amaranthaceae Salicornia europaea 10 Seu_jg16175, Seu_jg16767, Seu_jg16874, Seu_jg1975 ...
Seu_jg1976, Seu_jg20943, Seu_jg2541, Seu_jg2544, Seu_jg8372, Seu_jg8375
Amaranthaceae Suaeda aralocaspica 13 GOSA_00003006, GOSA_00003009, GOSA_00003590, GOSA_00005081 ...
GOSA_00005946, GOSA_00005950, GOSA_00008771, GOSA_00009287, GOSA_00009367, GOSA_00011547, GOSA_00011548, GOSA_00021391, GOSA_00021392
Amaranthaceae Suaeda glauca 27 Sgl02103, Sgl07256, Sgl45464, Sgl45465, Sgl48619, Sgl48620 ...
Sgl55353, Sgl60613, Sgl60700, Sgl61957, Sgl62045, Sgl62168, Sgl62717, Sgl63912, Sgl66516, Sgl66605, Sgl66729, Sgl67337, Sgl68404, Sgl71039, Sgl71042, Sgl73216, Sgl73220, Sgl74630, Sgl74633, Sgl76627, Sgl76631
Amaranthaceae Chenopodium album 30 gene:ENSEOMG00000004935, gene:ENSEOMG00000005724 ...
gene:ENSEOMG00000006088, gene:ENSEOMG00000006230, gene:ENSEOMG00000009814, gene:ENSEOMG00000011678, gene:ENSEOMG00000016390, gene:ENSEOMG00000016655, gene:ENSEOMG00000016996, gene:ENSEOMG00000018387, gene:ENSEOMG00000019490, gene:ENSEOMG00000019588, gene:ENSEOMG00000020468, gene:ENSEOMG00000020745, gene:ENSEOMG00000031740, gene:ENSEOMG00000034794, gene:ENSEOMG00000035655, gene:ENSEOMG00000038025, gene:ENSEOMG00000038361, gene:ENSEOMG00000038373, gene:ENSEOMG00000038906, gene:ENSEOMG00000039401, gene:ENSEOMG00000039681, gene:ENSEOMG00000039934, gene:ENSEOMG00000039989, gene:ENSEOMG00000045560, gene:ENSEOMG00000048314, gene:ENSEOMG00000049726, gene:ENSEOMG00000049899, gene:ENSEOMG00000052396
Amaranthaceae Chenopodium quinoa 21 CQ.Regalona.r1.1BG0020880, CQ.Regalona.r1.2AG0010820 ...
CQ.Regalona.r1.2AG0011730, CQ.Regalona.r1.2AG0022690, CQ.Regalona.r1.2BG0012210, CQ.Regalona.r1.2BG0013150, CQ.Regalona.r1.7AG0001260, CQ.Regalona.r1.7AG0001280, CQ.Regalona.r1.7AG0022430, CQ.Regalona.r1.7AG0022460, CQ.Regalona.r1.7BG0000130, CQ.Regalona.r1.7BG0024950, CQ.Regalona.r1.7BG0024980, CQ.Regalona.r1.8AG0000570, CQ.Regalona.r1.8AG0007180, CQ.Regalona.r1.8BG0000440, CQ.Regalona.r1.8BG0008090, CQ.Regalona.r1.9AG0010400, CQ.Regalona.r1.9AG0024290, CQ.Regalona.r1.9BG0004400, CQ.Regalona.r1.9BG0004430
Anacardiaceae Pistacia vera 5 pistato.v30235820, pistato.v30250900, pistato.v30268360 ...
pistato.v30268680, pistato.v30268710
Apiaceae Apium graveolens 12 Ag10G00980, Ag11G04842, Ag1G01820, Ag2G00426, Ag2G02776 ...
Ag4G01018, Ag4G01022, Ag5G00180, Ag7G00827, Ag8G00031, Ag8G00884, Ag8G00885
Arecaceae Cocos nucifera 18 COCNU_01G005110, COCNU_01G005120, COCNU_01G015010 ...
COCNU_02G002440, COCNU_02G002460, COCNU_04G004280, COCNU_04G004330, COCNU_04G012740, COCNU_04G012750, COCNU_04G012770, COCNU_06G005560, COCNU_06G015200, COCNU_14G011730, COCNU_16G005690, COCNU_16G005870, scaffold012757G000010, scaffold035072G000010, scaffold051902G000010
Arecaceae Phoenix dactylifera 17 gene-LOC103696596, gene-LOC103701786, gene-LOC103702110 ...
gene-LOC103702112, gene-LOC103702971, gene-LOC103706882, gene-LOC103706910, gene-LOC103708879, gene-LOC103708928, gene-LOC103709470, gene-LOC103714243, gene-LOC103714244, gene-LOC103715405, gene-LOC103720412, gene-LOC103720413, gene-LOC103721952, gene-LOC103721957
Asparagaceae Asparagus officinalis 6 AsparagusV1_01.1577.V1.1, AsparagusV1_02.428.V1.1 ...
AsparagusV1_05.1713.V1.1, AsparagusV1_05.1866.V1.1, AsparagusV1_07.396.V1.1, AsparagusV1_08.3369.V1.1
Asteraceae Flaveria trinervia 26 Ftri10G01225, Ftri10G30984, Ftri11G02167, Ftri11G07966 ...
Ftri11G10357, Ftri11G24549, Ftri11G25935, Ftri12G13365, Ftri12G21619, Ftri12G24011, Ftri12G29303, Ftri13G24858, Ftri14G17172, Ftri14G32085, Ftri14G33750, Ftri15G18854, Ftri15G29520, Ftri15G31884, Ftri18G20494, Ftri18G33927, Ftri3G20310, Ftri4G20068, Ftri5G15281, Ftri9G09576, Ftri9G19429, FtriNA05602
Brassicaceae Arabidopsis thaliana 17 AT1G29230.1, AT2G25090.1, AT2G30360.1, AT2G34180.1 ...
AT2G38490.1, AT3G23000.1, AT4G14580.1, AT4G18700.1, AT4G30960.1, AT5G01810.1, AT5G01820.1, AT5G07070.1, AT5G10930.1, AT5G25110.1, AT5G45810.1, AT5G45820.1, AT5G58380.1
Brassicaceae Eutrema salsugineum 19 Thhalv10000155m.g.v1.0, Thhalv10000868m.g.v1.0 ...
Thhalv10000893m.g.v1.0, Thhalv10004116m.g.v1.0, Thhalv10007360m.g.v1.0, Thhalv10013486m.g.v1.0, Thhalv10013492m.g.v1.0, Thhalv10013496m.g.v1.0, Thhalv10013601m.g.v1.0, Thhalv10013670m.g.v1.0, Thhalv10015596m.g.v1.0, Thhalv10015960m.g.v1.0, Thhalv10016543m.g.v1.0, Thhalv10016695m.g.v1.0, Thhalv10017776m.g.v1.0, Thhalv10020787m.g.v1.0, Thhalv10025024m.g.v1.0, Thhalv10025228m.g.v1.0, Thhalv10025230m.g.v1.0
Brassicaceae Schrenkiella parvula 19 Sp1g25160.v2.2, Sp2g10730.v2.2, Sp2g10740.v2.2 ...
Sp2g22410.v2.2, Sp3g20690.v2.2, Sp4g04100.v2.2, Sp4g12920.v2.2, Sp4g16490.v2.2, Sp4g20830.v2.2, Sp6g20050.v2.2, Sp6g32560.v2.2, Sp6g35800.v2.2, Sp6g35810.v2.2, Sp6g41060.v2.2, Sp6g41070.v2.2, Sp7g12670.v2.2, Sp7g12680.v2.2, Sp7g17410.v2.2, Sp7g28830.v2.2
Brassicaceae Brassica nigra 29 BniB01g010070.2N, BniB01g010100.2N, BniB01g013780.2N ...
BniB01g018180.2N, BniB01g039330.2N, BniB02g037780.2N, BniB02g051100.2N, BniB02g058320.2N, BniB02g062760.2N, BniB02g062770.2N, BniB02g077760.2N, BniB02g085110.2N, BniB03g010750.2N, BniB03g016710.2N, BniB04g011440.2N, BniB05g006870.2N, BniB05g017660.2N, BniB05g021560.2N, BniB05g028540.2N, BniB05g031850.2N, BniB05g031870.2N, BniB06g005970.2N, BniB06g019460.2N, BniB06g023440.2N, BniB06g023460.2N, BniB07g023670.2N, BniB07g048890.2N, BniB08g018890.2N, BniB08g024580.2N
Casuarinaceae Casuarina equisetifolia 11 Ceq02G0406, Ceq02G1274, Ceq03G2544, Ceq04G1320, Ceq04G1321 ...
Ceq04G2418, Ceq07G0369, Ceq08G0905, Ceq08G0908, Ceq08G1771, Ceq08G1776
Casuarinaceae Casuarina glauca 12 Cgl02G0432, Cgl02G1316, Cgl03G2684, Cgl04G1475, Cgl04G1476 ...
Cgl04G2621, Cgl07G0381, Cgl08G0922, Cgl08G0925, Cgl08G1814, Cgl08G1817, Cgl08G1819
Cymodoceaceae Cymodocea nodosa 11 gene.Cymno02g05140, gene.Cymno02g05160, gene.Cymno02g16350 ...
gene.Cymno02g18240, gene.Cymno03g01820, gene.Cymno03g09840, gene.Cymno04g14810, gene.Cymno04g14840, gene.Cymno05g16970, gene.Cymno05g16990, gene.Cymno07g06150
Hydrocharitaceae Thalassia testudinum 9 gene.Thate01g02770, gene.Thate01g31560, gene.Thate01g31590 ...
gene.Thate04g09630, gene.Thate06g03440, gene.Thate06g03490, gene.Thate07g07610, gene.Thate07g18150, gene.Thate08g10920
Malvaceae Hibiscus hamabo Siebold & Zucc. 6 nbisL1-mrna-11958, nbisL1-mrna-1867, nbisL1-mrna-279 ...
nbisL1-mrna-3720, nbisL1-mrna-4744, nbisL1-mrna-5000
Nitrariaceae Nitraria sibirica 13 evm.TU.LG01.571, evm.TU.LG01.577, evm.TU.LG01.897 ...
evm.TU.LG01.900, evm.TU.LG02.1715, evm.TU.LG02.1942, evm.TU.LG07.1521, evm.TU.LG07.262, evm.TU.LG11.918, evm.TU.LG11.919, evm.TU.LG11.920, evm.TU.LG12.809, evm.TU.LG12.810
Plantaginaceae Plantago ovata 16 Pov_00000869, Pov_00002609, Pov_00002611, Pov_00005569 ...
Pov_00005570, Pov_00006960, Pov_00011703, Pov_00011704, Pov_00011707, Pov_00011708, Pov_00015573, Pov_00016409, Pov_00016415, Pov_00020138, Pov_00038374, Pov_00040640
Plumbaginaceae Limonium bicolor 7 Lb1G04747, Lb1G07793, Lb2G09185, Lb2G14821, Lb3G18786 ...
Lb3G18814, Lb4G25598
Poaceae Echinochloa crus-galli 35 AH01.1215, AH02.248, AH02.250, AH02.3329, AH02.3330, AH04.69 ...
AH03.1934, AH03.4060, AH05.1753, AH05.3976, AH05.45, AH08.1687, BH01.1510, BH01.774, BH02.253, BH02.3638, BH02.3639, BH03.4396, BH05.1931, BH05.2177, BH05.30, BH06.1768, CH01.1433, CH02.230, CH02.232, CH02.3176, CH02.3177, CH03.2271, CH04.141, CH05.1996, CH05.4281, CH05.52, CH06.1963, CH07.115, CH08.1887
Poaceae Eleusine coracana subsp. coracana 38 gene-QOZ80_1AG0002460, gene-QOZ80_1AG0002480 ...
gene-QOZ80_1AG0033950, gene-QOZ80_1AG0033960, gene-QOZ80_1AG0038250, gene-QOZ80_1BG0051050, gene-QOZ80_1BG0051070, gene-QOZ80_1BG0084020, gene-QOZ80_1BG0084030, gene-QOZ80_1BG0088240, gene-QOZ80_2AG0102320, gene-QOZ80_2BG0155660, gene-QOZ80_3AG0225000, gene-QOZ80_3AG0247490, gene-QOZ80_3BG0270260, gene-QOZ80_3BG0280750, gene-QOZ80_5AG0366850, gene-QOZ80_5AG0369480, gene-QOZ80_5AG0377400, gene-QOZ80_5AG0379060, gene-QOZ80_5AG0397040, gene-QOZ80_5BG0414490, gene-QOZ80_5BG0417100, gene-QOZ80_5BG0424550, gene-QOZ80_5BG0426150, gene-QOZ80_5BG0445550, gene-QOZ80_6AG0535300, gene-QOZ80_6AG0542280, gene-QOZ80_6BG0488550, gene-QOZ80_6BG0495510, gene-QOZ80_7AG0581760, gene-QOZ80_7AG0581780, gene-QOZ80_7BG0612860, gene-QOZ80_7BG0612880, gene-QOZ80_8AG0632260, gene-QOZ80_8BG0661250, gene-QOZ80_9AG0672410, gene-QOZ80_9BG0696000
Poaceae Hordeum vulgare 19 HORVU.MOREX.r3.1HG0071290.1.CDS1 ...
HORVU.MOREX.r3.1HG0077650.1.CDS1, HORVU.MOREX.r3.2HG0108670.1.CDS1, HORVU.MOREX.r3.2HG0112410.1.CDS1, HORVU.MOREX.r3.2HG0112440.1.CDS1, HORVU.MOREX.r3.3HG0242960.1.CDS1, HORVU.MOREX.r3.3HG0246590.1.CDS1, HORVU.MOREX.r3.3HG0290170.1, HORVU.MOREX.r3.3HG0290180.1.CDS1, HORVU.MOREX.r3.3HG0297850.1.CDS1, HORVU.MOREX.r3.4HG0350770.1.CDS1, HORVU.MOREX.r3.4HG0352300.1.CDS1, HORVU.MOREX.r3.5HG0433220.1.CDS1, HORVU.MOREX.r3.5HG0464580.1.CDS1, HORVU.MOREX.r3.5HG0483990.1.CDS1, HORVU.MOREX.r3.5HG0484020.1, HORVU.MOREX.r3.5HG0509060.1.CDS1, HORVU.MOREX.r3.6HG0565350.1.CDS1, HORVU.MOREX.r3.7HG0719220.1.CDS1
Poaceae Lolium multiflorum 26 gene-QYE76_000725, gene-QYE76_000730, gene-QYE76_003642 ...
gene-QYE76_005186, gene-QYE76_005188, gene-QYE76_005627, gene-QYE76_010438, gene-QYE76_014172, gene-QYE76_015808, gene-QYE76_020648, gene-QYE76_031359, gene-QYE76_034315, gene-QYE76_038744, gene-QYE76_038749, gene-QYE76_038760, gene-QYE76_038764, gene-QYE76_048300, gene-QYE76_051056, gene-QYE76_051057, gene-QYE76_051058, gene-QYE76_051067, gene-QYE76_055142, gene-QYE76_055143, gene-QYE76_062935, gene-QYE76_064997, gene-QYE76_068101
Poaceae Oryza coarctata 38 Oco01G004680, Oco01G004700, Oco01G020750, Oco01G020760 ...
Oco02G004690, Oco02G004710, Oco02G021320, Oco02G021330, Oco02G024420, Oco03G002960, Oco04G002910, Oco05G013040, Oco05G018580, Oco06G013430, Oco06G019370, Oco09G004450, Oco09G006720, Oco09G014110, Oco10G004320, Oco10G006970, Oco10G012250, Oco10G014130, Oco11G010620, Oco12G010690, Oco13G015810, Oco13G015820, Oco14G016610, Oco14G016620, Oco15G009400, Oco16G008830, Oco17G004960, Oco17G004970, Oco18G004990, Oco22G000410, Oco23G000350, Oco23G000400, Oco23G009960, Oco24G009720
Poaceae Oryza sativa 20 LOC_Os01g10870.1, LOC_Os01g10890.1, LOC_Os01g55440.1 ...
LOC_Os01g55450.1, LOC_Os01g60910.1, LOC_Os02g06570.2, LOC_Os03g22050.3, LOC_Os03g43440.1, LOC_Os05g11790.1, LOC_Os05g26820.1, LOC_Os05g43840.1, LOC_Os06g35160.1, LOC_Os07g48090.1, LOC_Os07g48100.1, LOC_Os08g19410.1, LOC_Os08g34240.1, LOC_Os09g25090.1, LOC_Os09g25100.1, LOC_Os11g02240.1, LOC_Os12g02200.2
Poaceae Paspalum vaginatum 20 gene-BS78_01G148300, gene-BS78_01G361600, gene-BS78_K004600 ...
gene-BS78_02G184000, gene-BS78_02G390000, gene-BS78_02G390100, gene-BS78_03G023000, gene-BS78_03G023200, gene-BS78_03G282900, gene-BS78_03G283000, gene-BS78_03G320300, gene-BS78_04G045500, gene-BS78_05G012000, gene-BS78_05G012100, gene-BS78_07G149500, gene-BS78_08G020500, gene-BS78_08G136900, gene-BS78_09G200900, gene-BS78_09G227300, gene-BS78_K185200
Poaceae Puccinellia tenuiflora 11 Pt_Chr0104450, Pt_Chr0205157, Pt_Chr0205159, Pt_Chr0205198 ...
Pt_Chr0205200, Pt_Chr0500356, Pt_Chr0601833, Pt_Chr0601881, Pt_Chr0602689, Pt_Chr0702138, Pt_Chr0702179
Poaceae Sporobolus alterniflorus 50 Chr01G009780, Chr01G018480, Chr02G006020, Chr02G009080 ...
Chr02G009090, Chr02G028670, Chr03G016660, Chr03G019010, Chr04G018630, Chr04G020920, Chr05G005630, Chr05G006330, Chr05G024410, Chr05G024420, Chr05G027340, Chr06G019400, Chr06G022540, Chr07G022230, Chr08G004600, Chr08G004620, Chr08G016720, Chr0G002590, Chr0G003480, Chr10G009880, Chr10G015980, Chr11G006410, Chr12G005380, Chr12G014930, Chr12G027220, Chr14G014060, Chr16G008420, Chr17G014490, Chr18G006730, Chr18G012080, Chr18G013810, Chr19G000360, Chr19G008010, Chr19G011630, Chr20G005100, Chr21G013110, Chr22G003820, Chr22G005670, Chr22G011300, Chr24G012510, Chr24G012540, Chr27G004450, Chr27G008650, Chr27G017200, Chr27G017210, Chr29G005050
Poaceae Thinopyrum elongatum 24 Tel1E01G483600, Tel1E01G570200, Tel2E01G231900 ...
Tel2E01G232200, Tel2E01G912400, Tel3E01G116400, Tel3E01G229100, Tel3E01G259200, Tel3E01G483300, Tel3E01G483400, Tel3E01G552900, Tel3E01G706200, Tel4E01G184400, Tel4E01G191900, Tel4E01G307100, Tel5E01G009900, Tel5E01G125000, Tel5E01G258100, Tel5E01G368400, Tel5E01G368500, Tel5E01G601800, Tel6E01G284700, Tel6E01G285100, Tel7E01G634700
Poaceae Triticum dicoccoides 38 gene_TRIDC1AG044430, gene_TRIDC1AG049570 ...
gene_TRIDC1BG050310, gene_TRIDC1BG056290, gene_TRIDC2AG012790, gene_TRIDC2AG012840, gene_TRIDC2BG015670, gene_TRIDC2BG015690, gene_TRIDC3AG017780, gene_TRIDC3AG017810, gene_TRIDC3AG043780, gene_TRIDC3AG043810, gene_TRIDC3AG049880, gene_TRIDC3AG063210, gene_TRIDC3BG021770, gene_TRIDC3BG049760, gene_TRIDC3BG049770, gene_TRIDC3BG056120, gene_TRIDC3BG070920, gene_TRIDC4AG019030, gene_TRIDC4AG031070, gene_TRIDC4AG031880, gene_TRIDC4BG017870, gene_TRIDC4BG018710, gene_TRIDC5AG008850, gene_TRIDC5AG024830, gene_TRIDC5AG036020, gene_TRIDC5AG036040, gene_TRIDC5AG055280, gene_TRIDC5BG009780, gene_TRIDC5BG026060, gene_TRIDC5BG037920, gene_TRIDC5BG037930, gene_TRIDC5BG059300, gene_TRIDC6AG018180, gene_TRIDC6BG024050, gene_TRIDC7AG049130, gene_TRIDC7BG044680
Poaceae Triticum aestivum 57 TraesCS1A02G299600.1.cds1, TraesCS1A02G333800.1.cds1 ...
TraesCS1B02G309400.1.cds1, TraesCS1B02G347100.1.cds1, TraesCS1D02G298500.1.cds1, TraesCS2A02G106500.1.cds1, TraesCS2A02G107000.1, TraesCS2B02G123900.1.cds1, TraesCS2B02G124100.1.cds1, TraesCS2D02G106800.1.cds1, TraesCS2D02G107100.1.cds1, TraesCS3A02G135500.1.cds1, TraesCS3A02G135700.1.cds1, TraesCS3A02G305900.1.cds1, TraesCS3A02G306000.1, TraesCS3A02G346100.1.cds1, TraesCS3A02G446800.1.cds1, TraesCS3B02G153800.1.cds1, TraesCS3B02G169300.1.cds1, TraesCS3B02G330500.1, TraesCS3B02G330600.1, TraesCS3B02G377800.1.cds1, TraesCS3B02G482200.1.cds1, TraesCS3D02G136700.1.cds1, TraesCS3D02G151500.1.cds1, TraesCS3D02G295900.1, TraesCS3D02G296000.1, TraesCS3D02G339800.1.cds1, TraesCS3D02G439400.1.cds1, TraesCS4A02G136500.2, TraesCS4A02G194800.1.cds1, TraesCS4A02G200000.1.cds1, TraesCS4B02G115400.1.cds1, TraesCS4B02G120400.1.cds1, TraesCS4D02G113100.1.cds1, TraesCS4D02G118500.2.cds1, TraesCS4D02G170700.1.cds1, TraesCS5A02G057400.1.cds1, TraesCS5A02G148000.1.cds1, TraesCS5A02G225200.1.cds1, TraesCS5A02G225300.1.cds1, TraesCS5A02G377900.1.cds1, TraesCS5B02G059300.1.cds1, TraesCS5B02G146500.1.cds1, TraesCS5B02G223800.1.cds1, TraesCS5B02G223900.1.cds1, TraesCS5B02G381500.1.cds1, TraesCS5D02G068700.1.cds1, TraesCS5D02G144800.1.cds1, TraesCS5D02G232500.1.cds1, TraesCS5D02G232600.1.cds1, TraesCS5D02G387900.1.cds1, TraesCS6A02G135100.1.cds1, TraesCS6B02G163100.1.cds1, TraesCS6D02G124200.1.cds1, TraesCS7A02G352200.1, TraesCS7B02G275800.1.cds1
Poaceae Zea mays 24 Zm00001eb016180_P001, Zm00001eb041140_P001 ...
Zm00001eb099440_P001, Zm00001eb111510_P001, Zm00001eb111520_P001, Zm00001eb135610_P001, Zm00001eb149390_P001, Zm00001eb152500_P001, Zm00001eb179790_P001, Zm00001eb195230_P001, Zm00001eb232690_P001, Zm00001eb286750_P001, Zm00001eb292760_P001, Zm00001eb312900_P001, Zm00001eb312910_P002, Zm00001eb330590_P001, Zm00001eb330600_P001, Zm00001eb338230_P001, Zm00001eb338250_P002, Zm00001eb353170_P001, Zm00001eb370540_P001, Zm00001eb370550_P003, Zm00001eb383730_P001, Zm00001eb383740_P001
Poaceae Zoysia japonica 23 nbis-gene-11875, nbis-gene-14436, nbis-gene-17064 ...
nbis-gene-19321, nbis-gene-20049, nbis-gene-20406, nbis-gene-24380, nbis-gene-25810, nbis-gene-30093, nbis-gene-30811, nbis-gene-31128, nbis-gene-31129, nbis-gene-32619, nbis-gene-32620, nbis-gene-33235, nbis-gene-39663, nbis-gene-44573, nbis-gene-47569, nbis-gene-50467, nbis-gene-56864, nbis-gene-57573, nbis-gene-97, nbis-gene-99
Poaceae Zoysia macrostachya 29 Zma_g11195, Zma_g11196, Zma_g11436, Zma_g12222, Zma_g1246 ...
Zma_g14980, Zma_g23056, Zma_g24132, Zma_g24622, Zma_g25301, Zma_g25842, Zma_g26090, Zma_g26862, Zma_g28017, Zma_g30327, Zma_g3226, Zma_g32408, Zma_g32906, Zma_g32907, Zma_g3671, Zma_g5780, Zma_g5781, Zma_g7074, Zma_g7075, Zma_g7268, Zma_g7269, Zma_g8699, Zma_g905, Zma_g9592
Portulacaceae Portulaca oleracea 31 evm.TU.LG01.410, evm.TU.LG01.429, evm.TU.LG01.430 ...
evm.TU.LG03.2136, evm.TU.LG04.331, evm.TU.LG04.332, evm.TU.LG04.871, evm.TU.LG05.2062, evm.TU.LG05.494, evm.TU.LG07.105, evm.TU.LG07.17, evm.TU.LG07.1847, evm.TU.LG07.903, evm.TU.LG07.907, evm.TU.LG08.1005, evm.TU.LG10.51, evm.TU.LG13.543, evm.TU.LG14.425, evm.TU.LG15.1315, evm.TU.LG15.812, evm.TU.LG15.815, evm.TU.LG16.1640, evm.TU.LG17.45, evm.TU.LG18.1384, evm.TU.LG18.1385, evm.TU.LG20.502, evm.TU.LG20.503, evm.TU.LG21.240, evm.TU.LG22.731, evm.TU.LG25.831, evm.TU.LG26.25
Posidoniaceae Posidonia oceanica 12 gene.Posoc01g33640, gene.Posoc01g33690, gene.Posoc02g08810 ...
gene.Posoc02g19670, gene.Posoc02g24450, gene.Posoc02g24510, gene.Posoc03g12840, gene.Posoc04g23500, gene.Posoc08g02820, gene.Posoc08g09980, gene.Posoc08g10000, gene.Posoc09g10430
Rhizophoraceae Bruguiera sexangula 12 evm.TU.Scaffold_10_RagTag.127, evm.TU.Scaffold_10_RagTag.900 ...
evm.TU.Scaffold_12_RagTag.425, evm.TU.Scaffold_12_RagTag.426, evm.TU.Scaffold_13_RagTag.294, evm.TU.Scaffold_13_RagTag.296, evm.TU.Scaffold_13_RagTag.650, evm.TU.Scaffold_13_RagTag.654, evm.TU.Scaffold_1_RagTag.1901, evm.TU.Scaffold_2_RagTag.554, evm.TU.Scaffold_3_RagTag.378, evm.TU.Scaffold_6_RagTag.808
Rhizophoraceae Carallia pectinifolia 12 nbisL1-mrna-13574, nbisL1-mrna-13916, nbisL1-mrna-1545 ...
nbisL1-mrna-24319, nbisL1-mrna-24321, nbisL1-mrna-24322, nbisL1-mrna-25296, nbisL1-mrna-30417, nbisL1-mrna-30765, nbisL1-mrna-30767, nbisL1-mrna-5668, nbisL1-mrna-5671
Rhizophoraceae Ceriops tagal 11 nbisL1-mrna-11764, nbisL1-mrna-12231, nbisL1-mrna-12301 ...
nbisL1-mrna-12419, nbisL1-mrna-12948, nbisL1-mrna-12949, nbisL1-mrna-20133, nbisL1-mrna-2097, nbisL1-mrna-21278, nbisL1-mrna-4786, nbisL1-mrna-7192
Rhizophoraceae Ceriops zippeliana 12 nbisL1-mrna-16035, nbisL1-mrna-16565, nbisL1-mrna-19687 ...
nbisL1-mrna-19688, nbisL1-mrna-20974, nbisL1-mrna-20975, nbisL1-mrna-3627, nbisL1-mrna-3630, nbisL1-mrna-6115, nbisL1-mrna-686, nbisL1-mrna-9152, nbisL1-mrna-9637
Rhizophoraceae Kandelia candel 6 add.evm.TU.utg000004l.79, add.evm.TU.utg000011l.194 ...
add.evm.TU.utg000015l.69, add.evm.TU.utg000019l.412, add.evm.TU.utg000027l.139, add.evm.TU.utg000033l.26
Rhizophoraceae Kandelia obovata 10 Maker00000399, Maker00004155, Maker00005045, Maker00008052 ...
Maker00012512, Maker00015250, Maker00016788, Maker00017172, Maker00017969, Maker00018110
Rhizophoraceae Rhizophora apiculata 12 nbisL1-mrna-17778, nbisL1-mrna-18245, nbisL1-mrna-18431 ...
nbisL1-mrna-18432, nbisL1-mrna-18685, nbisL1-mrna-18687, nbisL1-mrna-19001, nbisL1-mrna-19107, nbisL1-mrna-19108, nbisL1-mrna-19332, nbisL1-mrna-22916, nbisL1-mrna-23532
Rhizophoraceae Rhizophora mangle 12 nbisL1-mrna-11908, nbisL1-mrna-13833, nbisL1-mrna-13837 ...
nbisL1-mrna-14521, nbisL1-mrna-15136, nbisL1-mrna-15140, nbisL1-mrna-16631, nbisL1-mrna-16832, nbisL1-mrna-16833, nbisL1-mrna-2185, nbisL1-mrna-4217, nbisL1-mrna-7810
Salicaceae Populus euphratica 19 populus_peu04694, populus_peu05601, populus_peu07456 ...
populus_peu07988, populus_peu09930, populus_peu12242, populus_peu12997, populus_peu17004, populus_peu17008, populus_peu18025, populus_peu18026, populus_peu18041, populus_peu18042, populus_peu18562, populus_peu18566, populus_peu21469, populus_peu25287, populus_peu26708, populus_peu34931
Solanaceae Lycium barbarum 21 gene-LOC132598997, gene-LOC132602301, gene-LOC132602981 ...
gene-LOC132605774, gene-LOC132605775, gene-LOC132606535, gene-LOC132606976, gene-LOC132609466, gene-LOC132610214, gene-LOC132611335, gene-LOC132613996, gene-LOC132618391, gene-LOC132619254, gene-LOC132623639, gene-LOC132625172, gene-LOC132630981, gene-LOC132630986, gene-LOC132635748, gene-LOC132637013, gene-LOC132640439, gene-LOC132644111
Solanaceae Solanum chilense 18 SOLCI000225300, SOLCI000426300, SOLCI000979700 ...
SOLCI001359300, SOLCI001861900, SOLCI001880500, SOLCI001936800, SOLCI002216400, SOLCI003410600, SOLCI003509500, SOLCI003701200, SOLCI003718100, SOLCI004938200, SOLCI005478200, SOLCI005478300, SOLCI005653200, SOLCI005764800, SOLCI005776800
Solanaceae Solanum pennellii 20 gene-LOC107002185, gene-LOC107005881, gene-LOC107007226 ...
gene-LOC107008694, gene-LOC107011232, gene-LOC107013006, gene-LOC107014304, gene-LOC107020713, gene-LOC107021109, gene-LOC107021374, gene-LOC107021493, gene-LOC107022687, gene-LOC107023714, gene-LOC107023834, gene-LOC107026273, gene-LOC107028509, gene-LOC107029167, gene-LOC107029461, gene-LOC107029712, gene-LOC107029756
Tamaricaceae Reaumuria soongarica 14 STRG.10728_chr07_-, STRG.15099_chr08_+, STRG.1691_chr01_+ ...
STRG.1693_chr01_-, STRG.22787_chr05_+, STRG.24158_chr05_+, STRG.2546_chr01_-, STRG.7191_chr04_-, STRG.9564_chr03_+, STRG.9567_chr03_-, gene_18226, gene_5718, gene_7235, gene_7394
Tamaricaceae Tamarix chinensis 14 TC01G1057, TC01G2911, TC01G4521, TC05G0138, TC05G0806 ...
TC07G1024, TC07G1026, TC07G1463, TC07G1466, TC08G0429, TC10G2410, TC11G0004, TC11G0006, TC11G2378
Zosteraceae Zostera marina 10 Zosma01g04280.v3.1, Zosma01g17590.v3.1, Zosma02g22050.v3.1 ...
Zosma02g22070.v3.1, Zosma03g06400.v3.1, Zosma03g14160.v3.1, Zosma03g36420.v3.1, Zosma06g15970.v3.1, Zosma06g21350.v3.1, Zosma851g00030.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.