halophFGD

Basic Information

Locus ID: Ag4G00246

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: BTB POZ and TAZ domain-containing protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr4	7406654	7408926	+	Ag4G00246

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.80	40,035.24 Da	47.98	94.23	-0.21

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd14733	BACK	133	176	7.13213E-6	-
Pfam	PF00651	BTB/POZ domain	31	130	4.6E-6	IPR000210
Pfam	PF02135	TAZ zinc finger	215	301	2.1E-11	IPR000197
SUPERFAMILY	SSF54695	POZ domain	28	130	2.2E-8	IPR011333
SUPERFAMILY	SSF57933	TAZ domain	207	308	8.5E-20	IPR035898
Gene3D	G3DSA:1.20.1020.10	TAZ domain	207	331	1.6E-20	IPR035898
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	21	132	2.4E-11	IPR011333
Gene3D	G3DSA:1.25.40.420	-	133	206	6.5E-11	-
SMART	SM00551	TAZ_2	208	302	6.1E-18	IPR000197
SMART	SM00225	BTB_4	31	132	1.5E-7	IPR000210

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K10523 (speckle-type POZ protein)

Pathway:

ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G63160.1	BTB and TAZ domain protein 1. BTB and TAZ domain protein. Short-lived nuclear-cytoplasmic protein targeted for degradation by the 26S proteosome pathway. Acts redundantly with BT2 and BT3 during female gametophyte development.
RefSeq	XP_017250264.1	PREDICTED: BTB/POZ and TAZ domain-containing protein 1-like [Daucus carota subsp. sativus]
Swiss-Prot	Q9FMK7	BTB/POZ and TAZ domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BT1 PE=1 SV=1
TrEMBL	A0A164XHK0	BTB domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_016431 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	1.980285	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	5.167109	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	4.824456	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	4.368296	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	3.814601	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	6.56978	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	9.922969	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	3.403274	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	5.105924	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	6.019464	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	4.210061	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	2.325842	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	2.075671	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	4.478537	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	4.38533	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	7.906785	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	3.115977	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	7.256956	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	2.577031	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	12.431038	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	10.070128	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	17.851988	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	16.648663	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	19.141573	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	10.686017	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	8.007689	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	4.558274	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	4.805528	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	6.792811	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	0.092596		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	0.266324		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	0.278211		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	1.53203		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	3.849874		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	1.431		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	1.378366		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	0		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	0.569562		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	2.26056	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	0.369918	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	0.223018	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	19.975119	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	4.338167	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	0.36285	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	1.630941	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	18.81138	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	16.75157	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	8.898693	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	4.330255	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	5.243556	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	9	jg10945, jg17357, jg18823, jg25960, jg25963, jg27539, jg5979 ... jg30714, jg39944
Aizoaceae	Mesembryanthemum crystallinum	3	gene_16741, gene_2828, gene_5459
Amaranthaceae	Atriplex hortensis	3	Ah019656, Ah027538, Ah028495
Amaranthaceae	Beta vulgaris	2	BVRB_3g058930, BVRB_6g128090
Amaranthaceae	Salicornia bigelovii	8	Sbi_jg13156, Sbi_jg26694, Sbi_jg33869, Sbi_jg38475 ... Sbi_jg52683, Sbi_jg52684, Sbi_jg6579, Sbi_jg6580
Amaranthaceae	Salicornia europaea	4	Seu_jg15207, Seu_jg15345, Seu_jg15346, Seu_jg9170
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00006442, GOSA_00010115, GOSA_00011779
Amaranthaceae	Suaeda glauca	6	Sgl01876, Sgl07054, Sgl34604, Sgl40019, Sgl74005, Sgl77509
Amaranthaceae	Chenopodium album	8	gene:ENSEOMG00000001065, gene:ENSEOMG00000008392 ... gene:ENSEOMG00000014715, gene:ENSEOMG00000026262, gene:ENSEOMG00000030611, gene:ENSEOMG00000036892, gene:ENSEOMG00000042045, gene:ENSEOMG00000045589
Amaranthaceae	Chenopodium quinoa	7	CQ.Regalona.r1.3AG0011190, CQ.Regalona.r1.3BG0011380 ... CQ.Regalona.r1.3BG0016170, CQ.Regalona.r1.6AG0026200, CQ.Regalona.r1.6BG0027630, CQ.Regalona.r1.7AG0008650, CQ.Regalona.r1.9BG0008750
Anacardiaceae	Pistacia vera	5	pistato.v30140450, pistato.v30205130, pistato.v30241480 ... pistato.v30247740, pistato.v30269110
Apiaceae	Apium graveolens	6	Ag4G00246, Ag4G01144, Ag5G00333, Ag5G00727, Ag5G02740 ... Ag9G00559
Arecaceae	Cocos nucifera	4	COCNU_02G013440, COCNU_05G003190, COCNU_08G003650 ... scaffold001527G000040
Arecaceae	Phoenix dactylifera	10	gene-LOC103696612, gene-LOC103706014, gene-LOC103709180 ... gene-LOC103714450, gene-LOC103718574, gene-LOC103719679, gene-LOC103720201, gene-LOC120106816, gene-LOC120111347, gene-LOC120113161
Asparagaceae	Asparagus officinalis	4	AsparagusV1_04.1873.V1.1, AsparagusV1_04.601.V1.1 ... AsparagusV1_09.918.V1.1, AsparagusV1_09.919.V1.1
Asteraceae	Flaveria trinervia	5	Ftri17G24944, Ftri18G21599, Ftri18G31278, Ftri1G06920 ... Ftri9G30316
Brassicaceae	Arabidopsis thaliana	5	AT1G05690.1, AT3G48360.1, AT4G37610.1, AT5G63160.1 ... AT5G67480.2
Brassicaceae	Eutrema salsugineum	5	Thhalv10004392m.g.v1.0, Thhalv10004447m.g.v1.0 ... Thhalv10007799m.g.v1.0, Thhalv10010463m.g.v1.0, Thhalv10025450m.g.v1.0
Brassicaceae	Schrenkiella parvula	5	Sp1g04510.v2.2, Sp2g26290.v2.2, Sp2g29170.v2.2 ... Sp5g13690.v2.2, Sp7g35270.v2.2
Brassicaceae	Brassica nigra	10	BniB02g088630.2N, BniB03g001480.2N, BniB04g002000.2N ... BniB05g001370.2N, BniB05g073840.2N, BniB06g011640.2N, BniB06g014370.2N, BniB06g044770.2N, BniB08g061610.2N, BniB08g076680.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq01G1854, Ceq05G1421, Ceq07G0306
Casuarinaceae	Casuarina glauca	3	Cgl01G2023, Cgl05G1422, Cgl07G0308
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno07g12800
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate02g09770, gene.Thate02g09780, gene.Thate04g23270
Malvaceae	Hibiscus hamabo Siebold & Zucc.	3	nbisL1-mrna-11973, nbisL1-mrna-2074, nbisL1-mrna-7127
Nitrariaceae	Nitraria sibirica	3	evm.TU.LG02.922, evm.TU.LG10.1003, evm.TU.LG11.518
Plantaginaceae	Plantago ovata	3	Pov_00019709, Pov_00022858, Pov_00023804
Plumbaginaceae	Limonium bicolor	2	Lb1G05479, Lb4G26166
Poaceae	Echinochloa crus-galli	13	AH02.4152, AH02.4242, AH07.2471, AH09.1338, BH02.4168 ... BH02.4169, BH02.4269, BH07.2277, BH09.1517, CH02.4202, CH02.4302, CH07.2352, CH09.1630
Poaceae	Eleusine coracana subsp. coracana	8	gene-QOZ80_1AG0042760, gene-QOZ80_1AG0043730 ... gene-QOZ80_1BG0092690, gene-QOZ80_1BG0093750, gene-QOZ80_2AG0136250, gene-QOZ80_2BG0191850, gene-QOZ80_4AG0313270, gene-QOZ80_4BG0344380
Poaceae	Hordeum vulgare	5	HORVU.MOREX.r3.2HG0176200.1, HORVU.MOREX.r3.2HG0176250.1 ... HORVU.MOREX.r3.3HG0306270.1, HORVU.MOREX.r3.3HG0308180.1, HORVU.MOREX.r3.3HG0308190.1
Poaceae	Lolium multiflorum	8	gene-QYE76_019048, gene-QYE76_023457, gene-QYE76_044721 ... gene-QYE76_044722, gene-QYE76_044748, gene-QYE76_044750, gene-QYE76_048357, gene-QYE76_057270
Poaceae	Oryza coarctata	7	Oco01G027090, Oco01G027800, Oco02G028160, Oco02G028900 ... Oco03G014390, Oco04G014740, Oco08G008750
Poaceae	Oryza sativa	5	LOC_Os01g66890.1, LOC_Os01g68020.1, LOC_Os02g38320.1 ... LOC_Os04g40630.1, LOC_Os10g29060.1
Poaceae	Paspalum vaginatum	4	gene-BS78_03G365100, gene-BS78_03G373500 ... gene-BS78_04G184200, gene-BS78_06G137600
Poaceae	Puccinellia tenuiflora	7	Pt_Chr0204455, Pt_Chr0307145, Pt_Chr0307246, Pt_Chr0307248 ... Pt_Chr0600185, Pt_Chr0600350, Pt_Chr0600394
Poaceae	Sporobolus alterniflorus	10	Chr05G030670, Chr05G031310, Chr09G012540, Chr0G023900 ... Chr0G024490, Chr0G031290, Chr0G031900, Chr13G008440, Chr25G009280, Chr30G009150
Poaceae	Thinopyrum elongatum	5	Tel2E01G591500, Tel2E01G591800, Tel3E01G635900 ... Tel3E01G657500, Tel3E01G657600
Poaceae	Triticum dicoccoides	9	gene_TRIDC2AG049490, gene_TRIDC2AG049510 ... gene_TRIDC2BG052380, gene_TRIDC3AG057100, gene_TRIDC3AG058710, gene_TRIDC3AG058730, gene_TRIDC3BG063970, gene_TRIDC3BG065730, gene_TRIDC3BG065750
Poaceae	Triticum aestivum	15	TraesCS2A02G323000.1, TraesCS2A02G323200.1 ... TraesCS2B02G359400.1, TraesCS2B02G359600.1, TraesCS2D02G339700.1, TraesCS2D02G339900.1, TraesCS3A02G400400.1, TraesCS3A02G413600.1, TraesCS3A02G413700.1, TraesCS3B02G433400.1, TraesCS3B02G448000.1, TraesCS3B02G448100.1, TraesCS3D02G394800.1, TraesCS3D02G408000.1, TraesCS3D02G408100.1
Poaceae	Zea mays	4	Zm00001eb144120_P001, Zm00001eb145030_P002 ... Zm00001eb246190_P001, Zm00001eb425100_P003
Poaceae	Zoysia japonica	7	nbis-gene-11064, nbis-gene-11125, nbis-gene-28419 ... nbis-gene-29748, nbis-gene-36905, nbis-gene-58685, nbis-gene-58980
Poaceae	Zoysia macrostachya	5	Zma_g11762, Zma_g13817, Zma_g19930, Zma_g9176, Zma_g9221
Portulacaceae	Portulaca oleracea	8	evm.TU.LG03.1131, evm.TU.LG04.820, evm.TU.LG05.2115 ... evm.TU.LG12.470, evm.TU.LG16.1592, evm.TU.LG18.42, evm.TU.LG26.75, evm.TU.LG26.955
Posidoniaceae	Posidonia oceanica	2	gene.Posoc05g01730, gene.Posoc05g01740
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_11_RagTag.1105, evm.TU.Scaffold_4_RagTag.409 ... evm.TU.Scaffold_3_RagTag.1552, evm.TU.Scaffold_6_RagTag.1790
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-14785, nbisL1-mrna-17364, nbisL1-mrna-1863 ... nbisL1-mrna-28966
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-1009, nbisL1-mrna-14247, nbisL1-mrna-5229 ... nbisL1-mrna-9377
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-11976, nbisL1-mrna-12653, nbisL1-mrna-1914 ... nbisL1-mrna-2768
Rhizophoraceae	Kandelia candel	4	evm.TU.utg000008l.265, evm.TU.utg000010l.164 ... evm.TU.utg000011l.1090, evm.TU.utg000019l.297
Rhizophoraceae	Kandelia obovata	4	Maker00001215, Maker00001815, Maker00007557, Maker00008702
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-14643, nbisL1-mrna-15449, nbisL1-mrna-5400 ... nbisL1-mrna-696
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-12922, nbisL1-mrna-1399, nbisL1-mrna-3293 ... nbisL1-mrna-8735
Salicaceae	Populus euphratica	6	populus_peu22491, populus_peu22492, populus_peu23282 ... populus_peu23880, populus_peu28767, populus_peu30189
Solanaceae	Lycium barbarum	6	gene-LOC132601739, gene-LOC132601746, gene-LOC132609298 ... gene-LOC132622447, gene-LOC132623539, gene-LOC132632549
Solanaceae	Solanum chilense	4	SOLCI004236000, SOLCI004734800, SOLCI005588100 ... SOLCI007486800
Solanaceae	Solanum pennellii	7	gene-LOC107006094, gene-LOC107009351, gene-LOC107015169 ... gene-LOC107019839, gene-LOC107021774, gene-LOC107023662, gene-LOC107026803
Tamaricaceae	Reaumuria soongarica	4	STRG.19918_chr07_+, STRG.4473_chr03_-, gene_15357, gene_6444
Tamaricaceae	Tamarix chinensis	4	TC01G1305, TC04G1910, TC08G2567, TC09G0920
Zosteraceae	Zostera marina	1	Zosma02g09500.v3.1