Basic Information
Locus ID:
Ag4G00121
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
C-terminal to LisH motif.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 3916595 | 3919591 | - | Ag4G00121 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 31,766.80 Da | 43.79 | 88.21 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27030.1 | TOPLESS-related 3. | 0 |
| RefSeq | XP_017251342.1 | PREDICTED: topless-related protein 4-like [Daucus carota subsp. sativus] | 0 |
| Q10NY2 | Protein TPR3 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A164XDC1 | WD_REPEATS_REGION domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_016269 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000042190 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30080380, pistato.v30275980 |
| Apiaceae | Apium graveolens | 1 | Ag4G00121 |
| Brassicaceae | Brassica nigra | 3 | BniB03g066280.2N, BniB05g041810.2N, BniB05g054270.2N |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-10809 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00027742 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb4G25036 |
| Posidoniaceae | Posidonia oceanica | 9 | gene.Posoc02g00930, gene.Posoc02g09460, gene.Posoc02g27990 ... |
| Tamaricaceae | Tamarix chinensis | 1 | TC08G2213 |