halophFGD

Basic Information

Locus ID: Ag3G02834

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: Ribosome inactivating protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr3	297077731	297079449	+	Ag3G02834

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.05	30,479.24 Da	29.08	89.93	-0.13

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_017259084.1	PREDICTED: uncharacterized protein LOC108228108 [Daucus carota subsp. sativus]	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	5.681606	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	9.202394	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	26.34989	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	29.996994	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	32.387383	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	58.729961	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	37.403885	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	20.566128	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	42.659325	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	40.031326	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	45.781979	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	51.956535	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	40.035007	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	38.181625	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	16.130646	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	16.004656	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	23.323233	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	36.741695	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	23.852896	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	22.012508	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	24.722038	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	61.194038	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	31.54335	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	40.777573	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	49.864429	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	24.753307	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	27.277777	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	32.252983	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	37.295715	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	45.741295		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	45.867702		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	51.851707		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	61.321022		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	26.913059		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	47.964661		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	93.233406		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	55.516689		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	57.987885		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	0	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	0	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	0	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	55.316765	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	54.696278	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	82.062492	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	39.693199	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	62.723343	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	67.553886	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	33.802513	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	24.249718	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	22.034452	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Apiaceae	Apium graveolens	7	Ag10G02925, Ag10G02927, Ag3G01441, Ag3G02834, Ag6G00738 ... Ag9G01545, Ag9G02669