halophFGD

Basic Information

Locus ID: Ag3G02308

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: cytochrome P450

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr3	254913945	254915721	-	Ag3G02308

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.55	45,330.26 Da	42.61	93.85	-0.05

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00067	Cytochrome P450	15	381	7.9E-75	IPR001128
SUPERFAMILY	SSF48264	Cytochrome P450	13	395	8.38E-90	IPR036396
Gene3D	G3DSA:1.10.630.10	Cytochrome P450	6	404	1.8E-98	IPR036396
ProSitePatterns	PS00086	Cytochrome P450 cysteine heme-iron ligand signature.	343	352	-	IPR017972
PRINTS	PR00385	P450 superfamily signature	350	361	3.8E-14	IPR001128
PRINTS	PR00385	P450 superfamily signature	341	350	3.8E-14	IPR001128
PRINTS	PR00463	E-class P450 group I signature	350	373	1.0E-15	IPR002401
PRINTS	PR00385	P450 superfamily signature	264	275	3.8E-14	IPR001128
PRINTS	PR00385	P450 superfamily signature	212	229	3.8E-14	IPR001128
PRINTS	PR00463	E-class P450 group I signature	201	218	1.0E-15	IPR002401
PRINTS	PR00463	E-class P450 group I signature	340	350	1.0E-15	IPR002401
PRINTS	PR00463	E-class P450 group I signature	221	247	1.0E-15	IPR002401
PRINTS	PR00463	E-class P450 group I signature	92	110	1.0E-15	IPR002401
Coils	Coil	Coil	139	166	-	-

Gene Ontology

Molecular Function:

GO:0004497 (monooxygenase activity) GO:0005506 (iron ion binding) GO:0016705 (oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen) GO:0020037 (heme binding)

KEGG Pathway

KO Term:

K20661 (cytochrome P450 family 714 subfamily A1)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G24910.1	cytochrome P450, family 714, subfamily A, polypeptide 1. member of CYP714A
RefSeq	XP_017243486.1	PREDICTED: cytochrome P450 714A1-like [Daucus carota subsp. sativus]
Swiss-Prot	Q93Z79	Cytochrome P450 714A1 OS=Arabidopsis thaliana OX=3702 GN=CYP714A1 PE=2 SV=1
TrEMBL	A0A6L5BAS7	Cytochrome P450 714A1-like OS=Apium graveolens OX=4045 GN=AG4045_012925 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	0.647253	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	0.554289	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	0.380923	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	0.337158	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	0.390209	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	0.101676	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	0	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	0	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	3.827948	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	4.387528	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	4.277471	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	4.804062	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	4.141287	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	5.121123	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	1.1211	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	2.182014	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	2.969487	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	5.127598	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	8.099962	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	4.684904	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	4.70084	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	3.220464	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	5.24765	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	3.841523	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	3.087828	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	8.674664	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	10.106274	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	4.336375	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	9.007215	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	6.618539		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	10.111728		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	8.648661		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	0.63377		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	2.016565		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	0.836995		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	0.814722		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	3.04932		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	0.991236		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	2.579917	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	8.915668	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	5.215403	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	0.115522	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	1.161667	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	2.762267	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	1.629792	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	0.131981	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	1.638914	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	3.906358	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	4.136851	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	2.957879	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	6	jg10096, jg10097, jg10400, jg35695, jg36831, jg8435
Aizoaceae	Mesembryanthemum crystallinum	4	gene_17111, gene_23854, gene_23856, gene_23857
Amaranthaceae	Atriplex hortensis	2	Ah023340, Ah032185
Amaranthaceae	Beta vulgaris	1	BVRB_2g038510
Amaranthaceae	Salicornia bigelovii	3	Sbi_jg29118, Sbi_jg30089, Sbi_jg3330
Amaranthaceae	Salicornia europaea	2	Seu_jg18364, Seu_jg6603
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00000138, GOSA_00004139
Amaranthaceae	Suaeda glauca	4	Sgl11444, Sgl16821, Sgl66131, Sgl70443
Amaranthaceae	Chenopodium album	5	gene:ENSEOMG00000015247, gene:ENSEOMG00000017710 ... gene:ENSEOMG00000033035, gene:ENSEOMG00000046565, gene:ENSEOMG00000048290
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.1AG0007670, CQ.Regalona.r1.2AG0005280 ... CQ.Regalona.r1.2BG0004510, CQ.Regalona.r1.2BG0021840
Anacardiaceae	Pistacia vera	5	pistato.v30001340, pistato.v30001350, pistato.v30131950 ... pistato.v30178400, pistato.v30269650
Apiaceae	Apium graveolens	9	Ag10G00682, Ag10G00683, Ag10G00688, Ag11G04234, Ag11G04237 ... Ag1G00922, Ag3G02308, Ag7G01068, AgUnG00157
Arecaceae	Cocos nucifera	4	COCNU_04G004870, COCNU_04G005090, COCNU_04G012070 ... contig69446838G000010
Arecaceae	Phoenix dactylifera	6	gene-LOC103697824, gene-LOC103700438, gene-LOC103702172 ... gene-LOC103712265, gene-LOC120105108, gene-LOC120110297
Asparagaceae	Asparagus officinalis	3	AsparagusV1_07.709.V1.1, AsparagusV1_07.757.V1.1 ... AsparagusV1_08.3321.V1.1
Asteraceae	Flaveria trinervia	1	Ftri9G33569
Brassicaceae	Arabidopsis thaliana	2	AT5G24900.1, AT5G24910.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10003974m.g.v1.0, Thhalv10005302m.g.v1.0
Brassicaceae	Schrenkiella parvula	1	Sp2g22550.v2.2
Brassicaceae	Brassica nigra	2	BniB02g077640.2N, BniB04g003680.2N
Casuarinaceae	Casuarina equisetifolia	9	Ceq02G0002, Ceq05G1021, Ceq05G1022, Ceq05G1024, Ceq05G1025 ... Ceq05G1179, Ceq05G1180, Ceq05G1181, Ceq08G2478
Casuarinaceae	Casuarina glauca	6	Cgl05G1029, Cgl05G1030, Cgl05G1032, Cgl05G1193, Cgl05G1194 ... Cgl08G2709
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno05g12980
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate01g29520, gene.Thate08g13500
Malvaceae	Hibiscus hamabo Siebold & Zucc.	4	nbisL1-mrna-3200, nbisL1-mrna-3246, nbisL1-mrna-4062 ... nbisL1-mrna-7396
Nitrariaceae	Nitraria sibirica	6	evm.TU.LG01.512, evm.TU.LG01.513, evm.TU.LG02.1642 ... evm.TU.LG04.34, evm.TU.LG04.35, evm.TU.LG04.36
Plantaginaceae	Plantago ovata	8	Pov_00016995, Pov_00021516, Pov_00028759, Pov_00034355 ... Pov_00034367, Pov_00034368, Pov_00034388, Pov_00040684
Plumbaginaceae	Limonium bicolor	2	Lb7G33424, Lb7G34034
Poaceae	Echinochloa crus-galli	21	AH01.3754, AH03.4076, AH04.100, AH04.97, AH05.18, AH05.19 ... AH05.2002, BH01.4100, BH03.4415, BH04.106, BH05.2143, BH05.52, BH05.53, CH01.4364, CH04.106, CH04.109, CH05.2204, CH05.85, CH05.86, CH05.87, CH07.95
Poaceae	Eleusine coracana subsp. coracana	9	gene-QOZ80_3AG0247250, gene-QOZ80_3BG0281000 ... gene-QOZ80_5AG0369100, gene-QOZ80_5BG0416720, gene-QOZ80_7AG0581950, gene-QOZ80_7BG0613100, gene-QOZ80_9AG0672720, gene-QOZ80_9BG0696340, gene-QOZ80_9BG0696350
Poaceae	Lolium multiflorum	8	gene-QYE76_003527, gene-QYE76_003528, gene-QYE76_014079 ... gene-QYE76_016507, gene-QYE76_065070, gene-QYE76_065074, gene-QYE76_065076, gene-QYE76_068130
Poaceae	Oryza coarctata	9	Oco05G012700, Oco06G013780, Oco09G012470, Oco10G012550 ... Oco13G015990, Oco14G016800, Oco23G000090, Oco23G000650, Oco24G000020
Poaceae	Oryza sativa	5	LOC_Os03g21400.1, LOC_Os05g40384.1, LOC_Os07g48330.1 ... LOC_Os12g02630.1, LOC_Os12g02640.1
Poaceae	Paspalum vaginatum	10	gene-BS78_01G365100, gene-BS78_02G392200, gene-BS78_K167700 ... gene-BS78_05G017300, gene-BS78_05G017700, gene-BS78_05G018300, gene-BS78_05G197600, gene-BS78_08G016100, gene-BS78_09G181400, gene-BS78_K221600
Poaceae	Puccinellia tenuiflora	11	Pt_Chr0103773, Pt_Chr0107799, Pt_Chr0107801, Pt_Chr0107844 ... Pt_Chr0108031, Pt_Chr0305443, Pt_Chr0305465, Pt_Chr0504532, Pt_Chr0504544, Pt_Chr0702913, Pt_Chr0702916
Poaceae	Sporobolus alterniflorus	13	Chr01G018290, Chr01G033960, Chr04G010550, Chr04G021080 ... Chr04G021090, Chr06G022700, Chr07G016210, Chr07G027230, Chr12G005670, Chr18G012360, Chr22G005400, Chr24G012290, Chr31G006660
Poaceae	Thinopyrum elongatum	8	Tel1E01G490400, Tel2E01G226800, Tel4E01G159300 ... Tel4E01G196000, Tel4E01G311700, Tel5E01G255300, Tel5E01G255400, Tel7E01G794800
Poaceae	Triticum dicoccoides	13	gene_TRIDC1AG044990, gene_TRIDC1BG050990 ... gene_TRIDC2AG012350, gene_TRIDC2BG015140, gene_TRIDC2BG030720, gene_TRIDC4AG018400, gene_TRIDC4AG030680, gene_TRIDC4AG034250, gene_TRIDC4BG015570, gene_TRIDC4BG019210, gene_TRIDC4BG031280, gene_TRIDC5AG024400, gene_TRIDC5BG025600
Poaceae	Triticum aestivum	22	TraesCS1A02G303100.1, TraesCS1B02G313400.1 ... TraesCS1D02G302500.1, TraesCS1D02G302600.1, TraesCS2A02G103900.1, TraesCS2B02G121000.1, TraesCS2B02G230500.1, TraesCS2D02G103600.1, TraesCS4A02G132500.1, TraesCS4A02G216000.1, TraesCS4B02G100300.2, TraesCS4B02G122900.1, TraesCS4B02G172200.1, TraesCS4D02G096600.1, TraesCS4D02G121000.2, TraesCS4D02G174200.1, TraesCS5A02G145600.2, TraesCS5A02G145700.1, TraesCS5B02G144500.1, TraesCS5B02G144600.2, TraesCS5D02G146500.1, TraesCS5D02G146600.1
Poaceae	Zea mays	4	Zm00001eb015820_P001, Zm00001eb111610_P001 ... Zm00001eb195520_P002, Zm00001eb290950_P001
Poaceae	Zoysia japonica	5	nbis-gene-25355, nbis-gene-25778, nbis-gene-25779 ... nbis-gene-3380, nbis-gene-78
Poaceae	Zoysia macrostachya	4	Zma_g24646, Zma_g28456, Zma_g3695, Zma_g7089
Portulacaceae	Portulaca oleracea	4	evm.TU.LG05.444, evm.TU.LG19.665, evm.TU.LG24.654 ... evm.TU.LG25.878
Posidoniaceae	Posidonia oceanica	3	gene.Posoc01g27700, gene.Posoc01g27710, gene.Posoc07g10550
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_2_RagTag.1283, evm.TU.Scaffold_7_RagTag.260 ... evm.TU.Scaffold_9_RagTag.99
Rhizophoraceae	Carallia pectinifolia	6	nbisL1-mrna-19460, nbisL1-mrna-22088, nbisL1-mrna-24525 ... nbisL1-mrna-24526, nbisL1-mrna-3928, nbisL1-mrna-3953
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-12457, nbisL1-mrna-20765
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-7028, nbisL1-mrna-7592
Rhizophoraceae	Kandelia candel	3	add.evm.TU.utg000003l.17, add.evm.TU.utg000009l.161 ... evm.TU.utg000028l.158
Rhizophoraceae	Kandelia obovata	1	Maker00010662
Rhizophoraceae	Rhizophora apiculata	1	nbisL1-mrna-8878
Rhizophoraceae	Rhizophora mangle	1	nbisL1-mrna-20220
Salicaceae	Populus euphratica	4	populus_peu06146, populus_peu17044, populus_peu19107 ... populus_peu21107
Solanaceae	Lycium barbarum	3	gene-LOC132606723, gene-LOC132611184, gene-LOC132645827
Solanaceae	Solanum chilense	2	SOLCI001872300, SOLCI005025100
Solanaceae	Solanum pennellii	3	gene-LOC107009010, gene-LOC107012765, gene-LOC107023574
Tamaricaceae	Reaumuria soongarica	2	STRG.6890_chr04_+, gene_4138
Tamaricaceae	Tamarix chinensis	1	TC08G1211
Zosteraceae	Zostera marina	1	Zosma03g30500.v3.1