halophFGD

Basic Information

Locus ID: Ag3G01462

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: Phosphatidylinositol 4-kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr3	88556714	88558288	+	Ag3G01462

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.80	57,770.41 Da	37.68	84.69	-0.34

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00454	Phosphatidylinositol 3- and 4-kinase	81	327	2.0E-46	IPR000403

Best hit

Source	Best Hit ID	Description
TAIR	AT3G56600.2	Protein kinase superfamily protein.
RefSeq	XP_017246859.1	PREDICTED: phosphatidylinositol 4-kinase gamma 8-like [Daucus carota subsp. sativus]
Swiss-Prot	Q0WMZ6	Phosphatidylinositol 4-kinase gamma 8 OS=Arabidopsis thaliana OX=3702 GN=PI4KG8 PE=2 SV=2
TrEMBL	A0A164XVT9	1-phosphatidylinositol 4-kinase OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_016889 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	0.512813	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	1.022273	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	0.301114	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	0.41758	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	0.568953	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	0.449269	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	0.243881	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	1.435356	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	0.841537	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	0.527426	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	0.782432	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	1.927654	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	0.325068	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	0.274781	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	0.280502	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	0.235323	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	0.141641	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	0.261366	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	0.043276	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	0.280043	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	0.253843	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	0.149513	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	0.088135	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	0.396432	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	0.144054	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	0.170637	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	0.172481	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	0.213425	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	0	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	1.656887		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	0.399231		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	0.381971		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	0.073841		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	55.967518		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	0.239987		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	0		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	0.089587		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	0.45478		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	0.040197	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	0.331833	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	0.198717	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	0.023831	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	0.352566	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	0	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	0.05285	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	0.088587	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	0.1895	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	40.889801	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	233.969009	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	188.78894	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	5	jg15788, jg31408, jg5330, jg7180, jg9232
Aizoaceae	Mesembryanthemum crystallinum	2	gene_16958, gene_18333
Amaranthaceae	Atriplex hortensis	2	Ah022259, Ah026322
Amaranthaceae	Beta vulgaris	3	BVRB_2g028270, BVRB_3g063740, BVRB_6g140010
Amaranthaceae	Salicornia bigelovii	6	Sbi_jg13958, Sbi_jg21675, Sbi_jg22138, Sbi_jg51981 ... Sbi_jg58950, Sbi_jg63664
Amaranthaceae	Salicornia europaea	3	Seu_jg16067, Seu_jg23225, Seu_jg9877
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00008685, GOSA_00012930, GOSA_00023601
Amaranthaceae	Suaeda glauca	7	Sgl02350, Sgl07513, Sgl34963, Sgl40316, Sgl40373, Sgl62617 ... Sgl67183
Amaranthaceae	Chenopodium album	5	gene:ENSEOMG00000001166, gene:ENSEOMG00000002102 ... gene:ENSEOMG00000026403, gene:ENSEOMG00000029990, gene:ENSEOMG00000043651
Amaranthaceae	Chenopodium quinoa	6	CQ.Regalona.r1.2AG0018020, CQ.Regalona.r1.2BG0019580 ... CQ.Regalona.r1.3AG0023620, CQ.Regalona.r1.3BG0024400, CQ.Regalona.r1.6AG0016530, CQ.Regalona.r1.6BG0017630
Anacardiaceae	Pistacia vera	3	pistato.v30145460, pistato.v30146670, pistato.v30296350
Apiaceae	Apium graveolens	6	Ag1G01515, Ag3G00765, Ag3G01462, Ag5G02089, Ag7G01494 ... Ag8G02078
Arecaceae	Cocos nucifera	4	COCNU_01G006120, COCNU_01G013930, COCNU_11G005680 ... COCNU_16G000930
Arecaceae	Phoenix dactylifera	5	gene-LOC103706563, gene-LOC103712755, gene-LOC103721296 ... gene-LOC103721668, gene-LOC120111352
Asparagaceae	Asparagus officinalis	3	AsparagusV1_01.570.V1.1, AsparagusV1_05.2236.V1.1 ... AsparagusV1_07.1768.V1.1
Asteraceae	Flaveria trinervia	6	Ftri15G26618, Ftri18G22856, Ftri3G04763, Ftri5G01039 ... Ftri8G14529, Ftri9G05656
Brassicaceae	Arabidopsis thaliana	5	AT1G13640.1, AT1G26270.1, AT2G03890.1, AT2G40850.1 ... AT3G56600.1
Brassicaceae	Eutrema salsugineum	5	Thhalv10003797m.g.v1.0, Thhalv10005874m.g.v1.0 ... Thhalv10007061m.g.v1.0, Thhalv10007082m.g.v1.0, Thhalv10016454m.g.v1.0
Brassicaceae	Schrenkiella parvula	5	Sp1g12270.v2.2, Sp1g22400.v2.2, Sp2g14690.v2.2 ... Sp4g23180.v2.2, Sp5g05960.v2.2
Brassicaceae	Brassica nigra	8	BniB01g004550.2N, BniB02g066160.2N, BniB03g018590.2N ... BniB04g013860.2N, BniB04g040540.2N, BniB06g038430.2N, BniB08g026440.2N, BniB08g071190.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq04G0844, Ceq07G0465, Ceq08G0520
Casuarinaceae	Casuarina glauca	3	Cgl04G0953, Cgl07G0486, Cgl08G0477
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno01g04090, gene.Cymno05g13350, gene.Cymno06g10130
Dunaliellaceae	Dunaliella salina	1	Dusal.0442s00005.v1.0
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate01g09320, gene.Thate09g17020
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-11144
Nitrariaceae	Nitraria sibirica	4	evm.TU.LG01.2669, evm.TU.LG02.346, evm.TU.LG03.432 ... evm.TU.LG10.491
Plantaginaceae	Plantago ovata	2	Pov_00000172, Pov_00027335
Plumbaginaceae	Limonium bicolor	2	Lb1G04858, Lb6G32601
Poaceae	Echinochloa crus-galli	8	AH02.871, AH06.1163, AH09.2612, BH09.2876, CH03.2606 ... CH03.2617, CH06.1328, CH09.3084
Poaceae	Eleusine coracana subsp. coracana	9	gene-QOZ80_1AG0004210, gene-QOZ80_1BG0052620 ... gene-QOZ80_4AG0300120, gene-QOZ80_4BG0330850, gene-QOZ80_6AG0517340, gene-QOZ80_6AG0538550, gene-QOZ80_6BG0469230, gene-QOZ80_6BG0491810, gene-QOZ80_8AG0635260
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.2HG0208880.1.CDS1 ... HORVU.MOREX.r3.3HG0256240.1.CDS1, HORVU.MOREX.r3.5HG0488570.1.CDS1, HORVU.MOREX.r3.7HG0671910.1.CDS1
Poaceae	Lolium multiflorum	5	gene-QYE76_005930, gene-QYE76_005973, gene-QYE76_029442 ... gene-QYE76_047209, gene-QYE76_052360
Poaceae	Oryza coarctata	9	Oco01G007610, Oco02G007890, Oco07G018690, Oco08G017980 ... Oco11G007380, Oco12G007440, Oco16G010520, Oco17G007300, Oco18G007540
Poaceae	Oryza sativa	6	LOC_Os01g16470.1, LOC_Os04g57300.1, LOC_Os06g17290.1 ... LOC_Os08g38200.1, LOC_Os09g29890.2, LOC_Os11g08480.1
Poaceae	Paspalum vaginatum	5	gene-BS78_02G214400, gene-BS78_03G115400 ... gene-BS78_06G276300, gene-BS78_07G173300, gene-BS78_10G119200
Poaceae	Puccinellia tenuiflora	4	Pt_Chr0603785, Pt_Chr0603866, Pt_Chr0701724, Pt_Chr0701755
Poaceae	Sporobolus alterniflorus	11	Chr02G026900, Chr05G004600, Chr10G008030, Chr11G017850 ... Chr14G005590, Chr17G015700, Chr21G005140, Chr23G001470, Chr25G001120, Chr26G017830, Chr30G001100
Poaceae	Thinopyrum elongatum	4	Tel2E01G920700, Tel3E01G321200, Tel5E01G402700 ... Tel7E01G386200
Poaceae	Triticum dicoccoides	8	gene_TRIDC2AG075390, gene_TRIDC2BG082490 ... gene_TRIDC3AG025900, gene_TRIDC3BG029610, gene_TRIDC5AG039270, gene_TRIDC5BG041590, gene_TRIDC7AG026830, gene_TRIDC7BG017390
Poaceae	Triticum aestivum	12	TraesCS2A02G540100.1.cds1, TraesCS2B02G570500.1 ... TraesCS2D02G541800.1.cds1, TraesCS3A02G186000.1.cds1, TraesCS3B02G215600.1.cds1, TraesCS3D02G190000.1.cds1, TraesCS5A02G251200.1, TraesCS5B02G249300.2.cds1, TraesCS5D02G259100.1, TraesCS7A02G213100.1.cds1, TraesCS7B02G119800.1.cds1, TraesCS7D02G215000.1.cds1
Poaceae	Zea mays	6	Zm00001eb101380_P001, Zm00001eb128610_P001 ... Zm00001eb315900_P001, Zm00001eb332980_P001, Zm00001eb380650_P001, Zm00001eb433200_P001
Poaceae	Zoysia japonica	5	nbis-gene-19576, nbis-gene-32518, nbis-gene-45579 ... nbis-gene-53992, nbis-gene-6137
Poaceae	Zoysia macrostachya	5	Zma_g22180, Zma_g29501, Zma_g31751, Zma_g32727, Zma_g7349
Portulacaceae	Portulaca oleracea	10	evm.TU.LG03.162, evm.TU.LG06.772, evm.TU.LG07.354 ... evm.TU.LG11.67, evm.TU.LG12.1556, evm.TU.LG13.1677, evm.TU.LG13.529, evm.TU.LG15.592, evm.TU.LG21.229, evm.TU.LG21.961
Posidoniaceae	Posidonia oceanica	5	gene.Posoc01g28420, gene.Posoc02g13310, gene.Posoc02g21960 ... gene.Posoc03g08180, gene.Posoc10g08000
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_15_RagTag.499, evm.TU.Scaffold_17_RagTag.512 ... evm.TU.Scaffold_3_RagTag.1680, evm.TU.Scaffold_7_RagTag.1584
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-1980, nbisL1-mrna-2125, nbisL1-mrna-22806 ... nbisL1-mrna-26681
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-13579, nbisL1-mrna-15260, nbisL1-mrna-15717 ... nbisL1-mrna-19390
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-13515, nbisL1-mrna-14993, nbisL1-mrna-15852 ... nbisL1-mrna-2879
Rhizophoraceae	Kandelia candel	3	add.evm.TU.utg000001l.148, add.evm.TU.utg000002l.46 ... add.evm.TU.utg000013l.109
Rhizophoraceae	Kandelia obovata	3	Maker00001721, Maker00002411, Maker00011877
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-18851, nbisL1-mrna-19613, nbisL1-mrna-22061 ... nbisL1-mrna-22338
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-12272, nbisL1-mrna-13044, nbisL1-mrna-14886 ... nbisL1-mrna-2526
Salicaceae	Populus euphratica	4	populus_peu06980, populus_peu10762, populus_peu20906 ... populus_peu25093
Solanaceae	Lycium barbarum	3	gene-LOC132605531, gene-LOC132616176, gene-LOC132641916
Solanaceae	Solanum chilense	3	SOLCI000348800, SOLCI000567200, SOLCI004658500
Solanaceae	Solanum pennellii	2	gene-LOC107017800, gene-LOC107032423
Tamaricaceae	Reaumuria soongarica	3	STRG.186_chr01_+, STRG.21018_chr08_+, STRG.22069_chr10_-
Tamaricaceae	Tamarix chinensis	4	TC01G0121, TC01G2925, TC03G0899, TC12G2025
Zosteraceae	Zostera marina	2	Zosma05g22090.v3.1, Zosma06g20490.v3.1