halophFGD

Basic Information

Locus ID: Ag2G02746

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2	314558802	314563967	-	Ag2G02746

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.44	47,370.00 Da	49.26	101.13	-0.26

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	190	281	6.7E-12	IPR000719
Pfam	PF12799	Leucine Rich repeats (2 copies)	30	69	1.6E-6	IPR025875
SUPERFAMILY	SSF52058	L domain-like	16	192	1.19E-18	-
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	174	361	1.61E-25	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	287	380	3.7E-8	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	159	265	2.9E-35	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	3	127	6.6E-25	IPR032675
ProSiteProfiles	PS50011	Protein kinase domain profile.	189	424	12.541819	IPR000719
ProSiteProfiles	PS51450	Leucine-rich repeat profile.	55	77	7.419328	IPR001611
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	195	217	-	IPR017441

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G23950.1	Leucine-rich repeat protein kinase family protein.
RefSeq	XP_017249218.1	PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g30520 [Daucus carota subsp. sativus]
Swiss-Prot	Q0WVM4	Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana OX=3702 GN=At2g23950 PE=1 SV=1
TrEMBL	A0A161YM23	Protein kinase domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_017931 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	6.407254	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	4.289302	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	6.863583	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	4.995544	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	4.993245	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	1.995755	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	2.27312	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	1.226441	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	16.95155	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	18.605093	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	18.244349	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	15.516019	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	13.398496	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	11.662874	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	0.531356	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	1.123013	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	5.455523	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	2.939305	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	3.03977	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	4.835608	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	3.237418	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	23.284948	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	24.23278	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	27.958538	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	22.28319	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	6.697028	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	5.791957	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	5.616773	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	9.79433	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	0.839029		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	1.288954		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	0.978326		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	2.83564		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	14.97506		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	1.923827		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	0.266912		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	0.192852		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	0.387616		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	5.920728	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	1.655108	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	0.880786	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	0.707204	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	1.125212	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	0.20588	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	1.590991	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	0.810424	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	2.72516	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	29.542128	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	42.606728	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	35.418831	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	5	jg10852, jg26318, jg26320, jg30129, jg6086
Aizoaceae	Mesembryanthemum crystallinum	2	gene_8498, gene_899
Amaranthaceae	Atriplex hortensis	2	Ah024787, Ah036384
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg39228, Sbi_jg39514, Sbi_jg54542, Sbi_jg54819
Amaranthaceae	Salicornia europaea	2	Seu_jg11085, Seu_jg14817
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00011791, GOSA_00016932
Amaranthaceae	Suaeda glauca	7	Sgl12830, Sgl14079, Sgl18076, Sgl72479, Sgl73989, Sgl76031 ... Sgl77494
Amaranthaceae	Chenopodium album	6	gene:ENSEOMG00000014496, gene:ENSEOMG00000017861 ... gene:ENSEOMG00000035285, gene:ENSEOMG00000035721, gene:ENSEOMG00000046138, gene:ENSEOMG00000046379
Amaranthaceae	Chenopodium quinoa	3	CQ.Regalona.r1.1AG0018930, CQ.Regalona.r1.1BG0004320 ... CQ.Regalona.r1.1BG0004330
Anacardiaceae	Pistacia vera	5	pistato.v30037140, pistato.v30043560, pistato.v30131510 ... pistato.v30173450, pistato.v30198900
Apiaceae	Apium graveolens	5	Ag11G03989, Ag2G02746, Ag4G02474, Ag8G02279, Ag9G00342
Arecaceae	Cocos nucifera	3	COCNU_02G007650, COCNU_03G006330, COCNU_13G002600
Arecaceae	Phoenix dactylifera	4	gene-LOC103700712, gene-LOC103721192, gene-SERK1, gene-SERK2
Asparagaceae	Asparagus officinalis	3	AsparagusV1_03.1728.V1.1, AsparagusV1_07.3495.V1.1 ... AsparagusV1_08.2239.V1.1
Asteraceae	Flaveria trinervia	3	Ftri14G15361, Ftri15G24356, Ftri2G30676
Brassicaceae	Arabidopsis thaliana	5	AT1G34210.1, AT1G71830.1, AT2G13790.1, AT2G13800.1 ... AT4G33430.2
Brassicaceae	Eutrema salsugineum	3	Thhalv10007069m.g.v1.0, Thhalv10019435m.g.v1.0 ... Thhalv10024694m.g.v1.0
Brassicaceae	Schrenkiella parvula	5	Sp1g29440.v2.2, Sp3g27100.v2.2, Sp5g26860.v2.2 ... Sp7g31130.v2.2, SpUn0020_0110.v2.2
Brassicaceae	Brassica nigra	8	BniB01g018440.2N, BniB02g011480.2N, BniB02g086300.2N ... BniB03g009480.2N, BniB03g040050.2N, BniB03g049650.2N, BniB03g061080.2N, BniB05g004700.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq03G1525, Ceq09G0691
Casuarinaceae	Casuarina glauca	2	Cgl03G1661, Cgl09G0746
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno03g12000, gene.Cymno04g09960, gene.Cymno05g10930 ... gene.Cymno09g05110
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate05g11960, gene.Thate09g00750
Nitrariaceae	Nitraria sibirica	6	evm.TU.LG06.1502, evm.TU.LG08.1141, evm.TU.LG08.1142 ... evm.TU.LG08.1143, evm.TU.LG08.1145, evm.TU.LG08.1147
Plantaginaceae	Plantago ovata	4	Pov_00017192, Pov_00020320, Pov_00037370, Pov_00039859
Plumbaginaceae	Limonium bicolor	6	Lb0G37194, Lb1G03706, Lb2G11469, Lb6G30747, Lb6G31965 ... Lb6G31976
Poaceae	Echinochloa crus-galli	8	AH07.2324, AH08.461, AH09.1215, BH06.2084, BH08.477 ... CH07.2207, CH08.576, CH09.1431
Poaceae	Eleusine coracana subsp. coracana	6	gene-QOZ80_2AG0135000, gene-QOZ80_2BG0190630 ... gene-QOZ80_4AG0315170, gene-QOZ80_4BG0346240, gene-QOZ80_8AG0619090, gene-QOZ80_8BG0646570
Poaceae	Hordeum vulgare	3	HORVU.MOREX.r3.2HG0172990.1, HORVU.MOREX.r3.6HG0587440.1 ... HORVU.MOREX.r3.7HG0697320.1
Poaceae	Lolium multiflorum	3	gene-QYE76_023160, gene-QYE76_032846, gene-QYE76_044485
Poaceae	Oryza coarctata	4	Oco07G007460, Oco08G007340, Oco15G003160, Oco16G003180
Poaceae	Oryza sativa	2	LOC_Os04g38480.1, LOC_Os08g07760.1
Poaceae	Paspalum vaginatum	2	gene-BS78_06G119700, gene-BS78_07G061700
Poaceae	Puccinellia tenuiflora	3	Pt_Chr0204260, Pt_Chr0302511, Pt_Chr0402407
Poaceae	Sporobolus alterniflorus	10	Chr06G009210, Chr09G013480, Chr13G009380, Chr15G010720 ... Chr16G002040, Chr17G001860, Chr20G011860, Chr23G011730, Chr26G007830, Chr29G010800
Poaceae	Thinopyrum elongatum	3	Tel2E01G565000, Tel6E01G394300, Telscf8801G000100
Poaceae	Triticum dicoccoides	6	gene_TRIDC2AG047180, gene_TRIDC2BG049730 ... gene_TRIDC6AG031090, gene_TRIDC6BG034630, gene_TRIDC7AG040370, gene_TRIDC7BG029770
Poaceae	Triticum aestivum	9	TraesCS2A02G343100.1, TraesCS2B02G340700.1 ... TraesCS2D02G321400.1, TraesCS6A02G203600.2, TraesCS6B02G223700.3, TraesCS6D02G186900.2, TraesCS7A02G293300.3, TraesCS7B02G182300.1, TraesCS7D02G291200.3
Poaceae	Zea mays	6	Zm00001eb153410_P001, Zm00001eb172000_P002 ... Zm00001eb182940_P001, Zm00001eb244860_P001, Zm00001eb414790_P001, Zm00001eb423960_P001
Poaceae	Zoysia japonica	5	nbis-gene-20671, nbis-gene-37686, nbis-gene-40640 ... nbis-gene-48507, nbis-gene-48510
Poaceae	Zoysia macrostachya	5	Zma_g13748, Zma_g16539, Zma_g19820, Zma_g23703, Zma_g23704
Portulacaceae	Portulaca oleracea	4	evm.TU.LG01.1049, evm.TU.LG12.1706, evm.TU.LG13.1643 ... evm.TU.LG17.1153
Posidoniaceae	Posidonia oceanica	4	gene.Posoc01g23750, gene.Posoc01g23760, gene.Posoc02g29200 ... gene.Posoc04g14460
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_1_RagTag.739, evm.TU.Scaffold_7_RagTag.1283 ... evm.TU.Scaffold_8_RagTag.449
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-18531, nbisL1-mrna-7366, nbisL1-mrna-9804
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-2264, nbisL1-mrna-8035
Rhizophoraceae	Ceriops zippeliana	1	nbisL1-mrna-5748
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000002l.319, evm.TU.utg000012l.472 ... evm.TU.utg000018l.707
Rhizophoraceae	Kandelia obovata	3	Maker00002795, Maker00011118, Maker00011745
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-8332, nbisL1-mrna-8979, nbisL1-mrna-9578
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-18492, nbisL1-mrna-18710, nbisL1-mrna-853
Salicaceae	Populus euphratica	5	populus_peu02566, populus_peu13847, populus_peu18834 ... populus_peu23005, populus_peu33423
Solanaceae	Lycium barbarum	3	gene-LOC132598764, gene-LOC132606404, gene-LOC132627425
Solanaceae	Solanum chilense	2	SOLCI001000400, SOLCI002452100
Solanaceae	Solanum pennellii	3	gene-LOC107002640, gene-LOC107005030, gene-LOC107017629
Tamaricaceae	Reaumuria soongarica	2	gene_11548, gene_7348
Tamaricaceae	Tamarix chinensis	2	TC10G2454, TC12G0459
Zosteraceae	Zostera marina	3	Zosma01g04670.v3.1, Zosma03g30810.v3.1, Zosma03g33250.v3.1