halophFGD

Basic Information

Locus ID: Ag2G02695

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: belongs to the protein kinase superfamily

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2	313293795	313296971	-	Ag2G02695

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.54	46,909.12 Da	37.76	76.27	-0.54

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	107	372	1.6E-42	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	84	374	5.6E-73	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	184	397	7.9E-55	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	75	182	4.6E-27	-
SMART	SM00220	serkin_6	106	374	8.7E-27	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	106	375	35.467167	IPR000719
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	112	134	-	IPR017441
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	227	239	-	IPR008271

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G18890.1	Protein kinase superfamily protein.
RefSeq	XP_017252773.1	PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Daucus carota subsp. sativus]
Swiss-Prot	Q5XF57	Probable receptor-like serine/threonine-protein kinase At5g57670 OS=Arabidopsis thaliana OX=3702 GN=At5g57670 PE=2 SV=1
TrEMBL	A0A161XSS8	Protein kinase domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_017978 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	1.831273	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	3.007619	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	2.830274	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	3.38412	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	3.513235	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	2.133624	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	2.067097	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	0.188007	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	14.981174	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	14.989609	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	12.465994	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	11.799945	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	12.832268	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	8.919772	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	7.467419	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	5.388528	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	2.840293	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	7.556549	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	7.463852	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	5.85451	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	7.520954	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	3.428916	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	4.115311	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	3.64099	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	3.648224	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	8.030644	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	5.972686	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	4.021879	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	5.34294	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	0.986109		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	3.851574		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	2.346708		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	0.902628		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	2.133736		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	1.418166		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	0.923182		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	2.071695		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	1.583443		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	11.650831	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	6.915956	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	1.958862	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	1.924481	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	5.375171	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	1.090123	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	2.281549	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	1.862458	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	2.340957	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	8.806179	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	8.666865	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	7.027607	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	3	jg15708, jg33130, jg4103
Aizoaceae	Mesembryanthemum crystallinum	2	gene_10808, gene_9174
Amaranthaceae	Atriplex hortensis	2	Ah014768, Ah014821
Amaranthaceae	Beta vulgaris	2	BVRB_8g198480, BVRB_8g198870
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg25176, Sbi_jg40800, Sbi_jg50776, Sbi_jg9015
Amaranthaceae	Salicornia europaea	2	Seu_jg19570, Seu_jg2328
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00007589, GOSA_00007632
Amaranthaceae	Suaeda glauca	4	Sgl42447, Sgl42485, Sgl47176, Sgl47215
Amaranthaceae	Chenopodium album	5	gene:ENSEOMG00000009726, gene:ENSEOMG00000010370 ... gene:ENSEOMG00000011974, gene:ENSEOMG00000033589, gene:ENSEOMG00000034256
Amaranthaceae	Chenopodium quinoa	3	CQ.Regalona.r1.8AG0018360, CQ.Regalona.r1.8BG0024040 ... CQ.Regalona.r1.8BG0024420
Anacardiaceae	Pistacia vera	2	pistato.v30263290, pistato.v30263920
Apiaceae	Apium graveolens	2	Ag10G02767, Ag2G02695
Arecaceae	Cocos nucifera	4	COCNU_01G003630, COCNU_01G008770, COCNU_11G009260 ... COCNU_11G012800
Arecaceae	Phoenix dactylifera	5	gene-LOC103697732, gene-LOC103701701, gene-LOC103707134 ... gene-LOC103717114, gene-LOC120109044
Asparagaceae	Asparagus officinalis	2	AsparagusV1_05.2459.V1.1, AsparagusV1_05.3462.V1.1
Asteraceae	Flaveria trinervia	2	Ftri14G09643, Ftri15G15518
Brassicaceae	Arabidopsis thaliana	2	AT2G18890.1, AT5G57670.2
Brassicaceae	Eutrema salsugineum	2	Thhalv10013078m.g.v1.0, Thhalv10022722m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp3g32360.v2.2, Sp6g19360.v2.2
Brassicaceae	Brassica nigra	3	BniB02g037050.2N, BniB03g067860.2N, BniB04g025350.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq03G1091, Ceq03G1190
Casuarinaceae	Casuarina glauca	2	Cgl03G1177, Cgl03G1297
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno01g08010
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate09g18670
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG07.443, evm.TU.LG07.520
Plantaginaceae	Plantago ovata	2	Pov_00000472, Pov_00000551
Plumbaginaceae	Limonium bicolor	2	Lb3G17089, Lb5G26577
Poaceae	Echinochloa crus-galli	9	AH06.2809, AH08.881, AH09.2544, BH06.2602, BH08.891 ... BH09.2777, CH06.2908, CH08.1025, CH09.2975
Poaceae	Eleusine coracana subsp. coracana	6	gene-QOZ80_4AG0301150, gene-QOZ80_4BG0331920 ... gene-QOZ80_6AG0549170, gene-QOZ80_6BG0502720, gene-QOZ80_8AG0624100, gene-QOZ80_8BG0649430
Poaceae	Hordeum vulgare	3	HORVU.MOREX.r3.2HG0203070.1, HORVU.MOREX.r3.7HG0729620.1 ... HORVU.MOREX.r3.7HG0742080.1
Poaceae	Lolium multiflorum	3	gene-QYE76_032343, gene-QYE76_035614, gene-QYE76_046855
Poaceae	Oryza coarctata	5	Oco07G017830, Oco08G017220, Oco11G015860, Oco15G005010 ... Oco16G004730
Poaceae	Oryza sativa	3	LOC_Os04g56060.1, LOC_Os06g47820.1, LOC_Os08g15060.1
Poaceae	Paspalum vaginatum	3	gene-BS78_06G264000, gene-BS78_07G099600 ... gene-BS78_10G243900
Poaceae	Puccinellia tenuiflora	2	Pt_Chr0306710, Pt_Chr0402829
Poaceae	Sporobolus alterniflorus	10	Chr10G021090, Chr11G001530, Chr16G003380, Chr17G003110 ... Chr20G009130, Chr23G002170, Chr25G001710, Chr26G017200, Chr29G008870, Chr30G001740
Poaceae	Thinopyrum elongatum	3	Tel2E01G856300, Tel7E01G723300, Tel7E01G862200
Poaceae	Triticum dicoccoides	6	gene_TRIDC2AG071060, gene_TRIDC2BG076820 ... gene_TRIDC7AG060290, gene_TRIDC7AG070390, gene_TRIDC7BG053340, gene_TRIDC7BG064840
Poaceae	Triticum aestivum	9	TraesCS2A02G504700.1, TraesCS2B02G532900.1 ... TraesCS2D02G505400.1, TraesCS7A02G432900.1, TraesCS7A02G502700.1, TraesCS7B02G333200.1, TraesCS7B02G409600.1, TraesCS7D02G424500.1, TraesCS7D02G490000.2
Poaceae	Zea mays	3	Zm00001eb068000_P002, Zm00001eb226210_P003 ... Zm00001eb412910_P001
Poaceae	Zoysia japonica	3	nbis-gene-23059, nbis-gene-48352, nbis-gene-6058
Poaceae	Zoysia macrostachya	4	Zma_g12911, Zma_g22120, Zma_g23848, Zma_g33305
Portulacaceae	Portulaca oleracea	6	evm.TU.LG02.2712, evm.TU.LG13.1607, evm.TU.LG16.1426 ... evm.TU.LG21.1050, evm.TU.LG23.923, evm.TU.LG26.244
Posidoniaceae	Posidonia oceanica	1	gene.Posoc03g14840
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_10_RagTag.272, evm.TU.Scaffold_4_RagTag.2050 ... evm.TU.Scaffold_4_RagTag.2103
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-13293, nbisL1-mrna-25396, nbisL1-mrna-25450
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-1965, nbisL1-mrna-7837, nbisL1-mrna-9399
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-16689, nbisL1-mrna-4815, nbisL1-mrna-4866 ... nbisL1-mrna-4867
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000008l.1196, evm.TU.utg000008l.1227 ... evm.TU.utg000033l.178
Rhizophoraceae	Kandelia obovata	3	Maker00000721, Maker00001285, Maker00014785
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-14267, nbisL1-mrna-14300, nbisL1-mrna-16590
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-14657, nbisL1-mrna-19413, nbisL1-mrna-19464
Salicaceae	Populus euphratica	7	populus_peu05427, populus_peu05497, populus_peu12041 ... populus_peu12053, populus_peu12118, populus_peu38138, populus_peu38152
Solanaceae	Lycium barbarum	2	gene-LOC132602829, gene-LOC132603416
Solanaceae	Solanum chilense	1	SOLCI006907200
Solanaceae	Solanum pennellii	2	gene-LOC107024048, gene-LOC107025530
Tamaricaceae	Reaumuria soongarica	2	gene_9117, gene_9155
Tamaricaceae	Tamarix chinensis	2	TC10G0836, TC10G0930
Zosteraceae	Zostera marina	1	Zosma03g00310.v3.1