Basic Information
Locus ID:
Ag2G01815
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
B3 domain-containing
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 199043507 | 199044273 | + | Ag2G01815 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 20,007.74 Da | 40.60 | 99.49 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 5 | 94 | 5.69E-9 | IPR015300 |
| Gene3D | G3DSA:2.40.330.10 | - | 2 | 97 | 2.5E-8 | IPR015300 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_017976630.1 | PREDICTED: B3 domain-containing transcription factor VRN1 [Theobroma cacao] | 0 |
| TrEMBL | A0A6L5B6S5 | TF-B3 domain-containing protein OS=Apium graveolens OX=4045 GN=AG4045_028131 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 54 | Ag10G00036, Ag10G00367, Ag10G00397, Ag10G00497, Ag10G00882 ... |