halophFGD

Basic Information

Locus ID: Ag2G00969

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: membrane protein At1g06890-like

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2	46646914	46658950	-	Ag2G00969

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.34	39,533.86 Da	38.22	101.26	0.18

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF03151	Triose-phosphate Transporter family	181	327	2.1E-11	IPR004853

KEGG Pathway

KO Term:

K15285 (solute carrier family 35, member E3)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G28315.2	-
RefSeq	XP_017253799.1	PREDICTED: uncharacterized membrane protein At1g06890-like [Daucus carota subsp. sativus]
Swiss-Prot	F4IHS9	UDP-xylose transporter 1 OS=Arabidopsis thaliana OX=3702 GN=UXT1 PE=1 SV=1
TrEMBL	A0A162A708	TPT domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_015526 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	24.189531	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	21.61095	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	34.240147	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	25.963608	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	22.959116	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	18.546467	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	22.519102	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	11.19348	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	39.710697	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	38.373051	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	46.058498	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	46.903378	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	57.609314	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	47.465557	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	27.033428	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	33.273796	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	27.417156	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	42.632618	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	33.26083	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	33.923386	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	36.042915	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	40.891308	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	47.668812	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	49.436939	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	39.809994	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	43.79303	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	44.627815	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	38.87468	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	49.041203	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	6.888707		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	10.12388		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	8.790845		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	22.999006		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	27.333157		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	24.674648		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	14.123223		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	6.486026		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	9.974641		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	23.983379	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	12.289708	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	7.321302	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	23.361948	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	40.304607	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	51.347393	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	55.925987	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	23.748091	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	64.062996	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	30.169889	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	32.803555	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	31.20776	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	6	jg10074, jg16553, jg16714, jg34088, jg38054, jg8250
Aizoaceae	Mesembryanthemum crystallinum	3	gene_17083, gene_20823, gene_7087
Amaranthaceae	Atriplex hortensis	3	Ah028197, Ah032080, Ah037923
Amaranthaceae	Beta vulgaris	3	BVRB_2g042710, BVRB_7g175770, BVRB_9g205250
Amaranthaceae	Salicornia bigelovii	6	Sbi_jg2610, Sbi_jg26900, Sbi_jg30148, Sbi_jg33665 ... Sbi_jg43594, Sbi_jg60077
Amaranthaceae	Salicornia europaea	3	Seu_jg18309, Seu_jg24261, Seu_jg8365
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00003000, GOSA_00004068, GOSA_00015883
Amaranthaceae	Suaeda glauca	6	Sgl66056, Sgl70372, Sgl73210, Sgl76621, Sgl78493, Sgl80989
Amaranthaceae	Chenopodium album	8	gene:ENSEOMG00000005392, gene:ENSEOMG00000013465 ... gene:ENSEOMG00000018604, gene:ENSEOMG00000022716, gene:ENSEOMG00000036490, gene:ENSEOMG00000039276, gene:ENSEOMG00000051737, gene:ENSEOMG00000051811
Amaranthaceae	Chenopodium quinoa	6	CQ.Regalona.r1.2AG0002730, CQ.Regalona.r1.2BG0003920 ... CQ.Regalona.r1.7AG0001200, CQ.Regalona.r1.9AG0004470, CQ.Regalona.r1.9BG0004470, CQ.Regalona.r1.9BG0017770
Anacardiaceae	Pistacia vera	2	pistato.v30058490, pistato.v30268340
Apiaceae	Apium graveolens	4	Ag11G03446, Ag2G00969, Ag3G02199, Ag7G00126
Arecaceae	Cocos nucifera	4	COCNU_04G004450, COCNU_04G012720, COCNU_07G000310 ... COCNU_10G000340
Arecaceae	Phoenix dactylifera	6	gene-LOC103702123, gene-LOC103703958, gene-LOC103708422 ... gene-LOC103708886, gene-LOC103713422, gene-LOC103720405
Asparagaceae	Asparagus officinalis	3	AsparagusV1_02.352.V1.1, AsparagusV1_04.34.V1.1 ... AsparagusV1_07.552.V1.1
Asteraceae	Flaveria trinervia	3	Ftri10G29443, Ftri17G00667, Ftri6G27210
Brassicaceae	Arabidopsis thaliana	3	AT1G06890.1, AT2G28315.1, AT2G30460.1
Brassicaceae	Eutrema salsugineum	3	Thhalv10008030m.g.v1.0, Thhalv10016866m.g.v1.0 ... Thhalv10016887m.g.v1.0
Brassicaceae	Schrenkiella parvula	1	Sp1g05600.v2.2
Brassicaceae	Brassica nigra	5	BniB01g015670.2N, BniB02g003080.2N, BniB03g001980.2N ... BniB06g017170.2N, BniB06g043830.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq02G0038, Ceq08G1691, Ceq08G2432
Casuarinaceae	Casuarina glauca	4	Cgl02G0041, Cgl08G1732, Cgl08G2654, Cgl08G2669
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno03g06220, gene.Cymno04g14990
Dunaliellaceae	Dunaliella salina	4	Dusal.0195s00010.v1.0, Dusal.0290s00016.v1.0 ... Dusal.0405s00003.v1.0, Dusal.0405s00005.v1.0
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate01g05580, gene.Thate01g31450
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-553
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG01.561, evm.TU.LG09.898
Plantaginaceae	Plantago ovata	2	Pov_00014606, Pov_00040648
Plumbaginaceae	Limonium bicolor	3	Lb0G38368, Lb1G02477, Lb1G02482
Poaceae	Echinochloa crus-galli	14	AH01.1741, AH02.529, AH05.1105, AH07.2674, AH09.1596 ... BH01.2062, BH02.546, BH05.1162, BH07.2501, BH09.1789, CH02.608, CH05.1304, CH07.2564, CH09.1919
Poaceae	Eleusine coracana subsp. coracana	10	gene-QOZ80_1AG0010940, gene-QOZ80_1BG0059490 ... gene-QOZ80_2AG0128080, gene-QOZ80_2AG0138050, gene-QOZ80_2BG0183510, gene-QOZ80_2BG0193740, gene-QOZ80_4AG0310370, gene-QOZ80_4BG0341570, gene-QOZ80_5AG0403400, gene-QOZ80_5BG0451770
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.1HG0025990.1, HORVU.MOREX.r3.1HG0043600.1 ... HORVU.MOREX.r3.2HG0182210.2, HORVU.MOREX.r3.3HG0234660.1
Poaceae	Lolium multiflorum	6	gene-QYE76_009799, gene-QYE76_011522, gene-QYE76_023804 ... gene-QYE76_045089, gene-QYE76_045091, gene-QYE76_050025
Poaceae	Oryza coarctata	12	Oco01G002580, Oco01G023580, Oco02G002630, Oco02G024340 ... Oco03G015880, Oco04G016500, Oco09G003230, Oco10G003190, Oco11G010050, Oco12G010000, Oco19G006210, Oco20G006160
Poaceae	Oryza sativa	6	LOC_Os01g07310.1, LOC_Os01g60780.1, LOC_Os02g41780.1 ... LOC_Os05g07670.1, LOC_Os06g30950.1, LOC_Os10g33920.1
Poaceae	Paspalum vaginatum	4	gene-BS78_01G201500, gene-BS78_03G053100 ... gene-BS78_06G161000, gene-BS78_09G065900
Poaceae	Puccinellia tenuiflora	8	Pt_Chr0200430, Pt_Chr0204122, Pt_Chr0207443, Pt_Chr0302065 ... Pt_Chr0306747, Pt_Chr0501710, Pt_Chr0501750, Pt_Chr0502600
Poaceae	Sporobolus alterniflorus	20	Chr01G011730, Chr02G019340, Chr03G004850, Chr05G010330 ... Chr06G007120, Chr06G012720, Chr08G000110, Chr09G011350, Chr09G025490, Chr0G009550, Chr12G024950, Chr13G006990, Chr13G013890, Chr15G015800, Chr18G000280, Chr22G014360, Chr23G008670, Chr25G007080, Chr26G011070, Chr30G007000
Poaceae	Thinopyrum elongatum	4	Tel1E01G209000, Tel1E01G288500, Tel2E01G654100 ... Tel3E01G169800
Poaceae	Triticum dicoccoides	8	gene_TRIDC1AG014500, gene_TRIDC1AG023830 ... gene_TRIDC1BG019550, gene_TRIDC1BG028850, gene_TRIDC2AG054940, gene_TRIDC2BG057690, gene_TRIDC3AG011720, gene_TRIDC3BG015720
Poaceae	Triticum aestivum	12	TraesCS1A02G112100.2, TraesCS1A02G156400.1 ... TraesCS1B02G132400.3, TraesCS1B02G173400.1, TraesCS1D02G113700.2, TraesCS1D02G154900.1, TraesCS2A02G380500.1, TraesCS2B02G397500.1, TraesCS2D02G376800.1, TraesCS3A02G097100.2, TraesCS3B02G112800.1, TraesCS3D02G097600.2
Poaceae	Zea mays	9	Zm00001eb045670_P001, Zm00001eb077180_P002 ... Zm00001eb123260_P001, Zm00001eb221640_P001, Zm00001eb247710_P001, Zm00001eb281960_P001, Zm00001eb336390_P001, Zm00001eb345900_P001, Zm00001eb426730_P001
Poaceae	Zoysia japonica	7	nbis-gene-18107, nbis-gene-19191, nbis-gene-21147 ... nbis-gene-23523, nbis-gene-54950, nbis-gene-6876, nbis-gene-9431
Poaceae	Zoysia macrostachya	7	Zma_g10013, Zma_g13400, Zma_g13930, Zma_g16204, Zma_g20059 ... Zma_g26502, Zma_g27765
Portulacaceae	Portulaca oleracea	6	evm.TU.LG02.2183, evm.TU.LG05.473, evm.TU.LG10.59 ... evm.TU.LG17.53, evm.TU.LG23.418, evm.TU.LG25.847
Posidoniaceae	Posidonia oceanica	2	gene.Posoc01g33360, gene.Posoc02g16740
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_12_RagTag.381, evm.TU.Scaffold_12_RagTag.418 ... evm.TU.Scaffold_13_RagTag.659
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-24329, nbisL1-mrna-24361, nbisL1-mrna-24440 ... nbisL1-mrna-30410
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-20582, nbisL1-mrna-2198, nbisL1-mrna-2372
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-16043, nbisL1-mrna-19647, nbisL1-mrna-19681
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000015l.373, evm.TU.utg000027l.317 ... evm.TU.utg000027l.341
Rhizophoraceae	Kandelia obovata	3	Maker00015840, Maker00017906, Maker00017953
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-4297, nbisL1-mrna-5644, nbisL1-mrna-5668
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-11869, nbisL1-mrna-11902, nbisL1-mrna-15130
Salicaceae	Populus euphratica	5	populus_peu08362, populus_peu14547, populus_peu16995 ... populus_peu18555, populus_peu35476
Solanaceae	Lycium barbarum	4	gene-LOC132600402, gene-LOC132605972, gene-LOC132606573 ... gene-LOC132611282
Solanaceae	Solanum chilense	4	SOLCI004279400, SOLCI006902500, SOLCI006963600 ... SOLCI007448100
Solanaceae	Solanum pennellii	4	gene-LOC107003300, gene-LOC107021614, gene-LOC107021998 ... gene-LOC107023842
Tamaricaceae	Reaumuria soongarica	2	STRG.24173_chr05_-, gene_3045
Tamaricaceae	Tamarix chinensis	2	TC01G4500, TC11G2388
Zosteraceae	Zostera marina	3	Zosma01g19340.v3.1, Zosma03g14220.v3.1, Zosma04g26120.v3.1