Basic Information
Locus ID:
Ag2G00720
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 25591144 | 25613993 | - | Ag2G00720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 12,427.68 Da | 39.05 | 123.74 | 0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00083 | Sugar (and other) transporter | 18 | 105 | 1.3E-23 | IPR005828 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 15 | 109 | 8.89E-13 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 4 | 111 | 1.9E-23 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 1 | 115 | 10.250281 | IPR020846 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G26340.1 | Major facilitator superfamily protein. Encodes a protein with high affinity, hexose-specific/H+ symporter activity. The activity of the transporter appears to be negatively regulated by phosphorylation. Importantly, microarray analysis, as well as the study of the expression of this gene in mutants involved in programmed cell death (PCD) demonstrated a tight correlation between this gene's expression and PCD. | 0 |
| RefSeq | XP_030496027.1 | sugar transport protein 13-like [Cannabis sativa] | 0 |
| Q94AZ2 | Sugar transport protein 13 OS=Arabidopsis thaliana OX=3702 GN=STP13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A7J6ES82 | MFS domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_017812 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg8121 |
| Apiaceae | Apium graveolens | 1 | Ag2G00720 |
| Poaceae | Echinochloa crus-galli | 1 | BH01.3244 |
| Poaceae | Oryza coarctata | 2 | Oco13G003610, Oco17G002020 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr10G012790 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC6BG023930 |
| Zosteraceae | Zostera marina | 2 | Zosma04g05630.v3.1, Zosma04g05650.v3.1 |