halophFGD

Basic Information

Locus ID: Ag2G00309

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: wall-associated receptor kinase-like

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2	6125258	6129793	-	Ag2G00309

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.20	75,579.30 Da	48.13	87.54	-0.17

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	334	603	1.2E-44	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	318	616	1.34E-74	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	318	410	1.5E-27	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	411	628	3.2E-52	-
Gene3D	G3DSA:2.10.25.10	Laminin	210	246	3.5E-6	-
SMART	SM00220	serkin_6	333	610	1.5E-34	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	333	612	37.827545	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	455	467	-	IPR008271
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	339	362	-	IPR017441
MobiDBLite	mobidb-lite	consensus disorder prediction	645	686	-	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G23450.1	Protein kinase superfamily protein.
RefSeq	XP_028083092.1	wall-associated receptor kinase-like 14 [Camellia sinensis]
Swiss-Prot	Q8RY67	Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana OX=3702 GN=WAKL14 PE=2 SV=2
TrEMBL	A0A162A6S9	Protein kinase domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_019492 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	9.391453	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	14.067098	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	13.508598	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	21.785196	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	24.354771	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	8.667134	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	5.444293	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	3.000858	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	2.690285	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	2.195272	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	2.178076	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	2.051226	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	1.86874	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	2.361487	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	0.505133	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	2.082738	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	2.082954	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	4.680239	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	1.396038	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	11.88762	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	21.078299	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	15.196322	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	10.330261	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	5.923511	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	6.871433	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	5.597424	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	2.926643	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	9.906864	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	5.326689	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	0.018489		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	0.07424		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	0.089895		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	2.926328		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	1.746448		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	4.529342		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	6.528867		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	0.206108		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	2.637265		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	0.540513	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	0.39966	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	0.387903	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	19.707253	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	22.131294	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	70.086082	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	70.260933	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	33.905926	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	38.679634	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	3.978652	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	4.746844	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	4.580525	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	7	jg11930, jg19699, jg19707, jg22822, jg30633, jg40098, jg6278
Aizoaceae	Mesembryanthemum crystallinum	1	gene_24198
Amaranthaceae	Atriplex hortensis	3	Ah026658, Ah026723, Ah026725
Amaranthaceae	Beta vulgaris	1	BVRB_6g138340
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg51555, Sbi_jg5828
Amaranthaceae	Salicornia europaea	1	Seu_jg13589
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00013480
Amaranthaceae	Suaeda glauca	2	Sgl34700, Sgl40111
Amaranthaceae	Chenopodium album	4	gene:ENSEOMG00000003147, gene:ENSEOMG00000003976 ... gene:ENSEOMG00000024346, gene:ENSEOMG00000026652
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.6AG0018460, CQ.Regalona.r1.6AG0018940 ... CQ.Regalona.r1.6BG0019590, CQ.Regalona.r1.6BG0019990
Anacardiaceae	Pistacia vera	2	pistato.v30045940, pistato.v30207160
Apiaceae	Apium graveolens	3	Ag10G02267, Ag2G00309, AgUnG00691
Arecaceae	Cocos nucifera	3	COCNU_06G017870, COCNU_06G017880, scaffold016103G000020
Arecaceae	Phoenix dactylifera	2	gene-LOC103707476, gene-LOC103709170
Asparagaceae	Asparagus officinalis	1	AsparagusV1_03.833.V1.1
Asteraceae	Flaveria trinervia	3	Ftri13G31129, Ftri17G31046, Ftri18G26696
Brassicaceae	Arabidopsis thaliana	3	AT2G23450.2, AT4G00955.1, AT5G66790.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10000066m.g.v1.0, Thhalv10003840m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp2g29890.v2.2, Sp4g02450.v2.2
Brassicaceae	Brassica nigra	3	BniB01g020340.2N, BniB02g020460.2N, BniB06g015260.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq03G1668, Ceq08G1667
Casuarinaceae	Casuarina glauca	2	Cgl03G1792, Cgl08G1707
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno01g15070
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate06g13410
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-4396, nbisL1-mrna-7065
Nitrariaceae	Nitraria sibirica	4	evm.TU.LG02.2233, evm.TU.LG03.1058, evm.TU.LG03.2584 ... evm.TU.LG06.515
Plantaginaceae	Plantago ovata	3	Pov_00002402, Pov_00024027, Pov_00029413
Plumbaginaceae	Limonium bicolor	6	Lb1G05961, Lb7G35130, Lb7G35139, Lb8G35804, Lb8G35909 ... Lb8G36612
Poaceae	Echinochloa crus-galli	8	AH01.4464, AH05.3932, BH05.4015, BH05.4016, CH01.4117 ... CH01.5071, CH05.4216, Contig192.105
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_3AG0239510, gene-QOZ80_3BG0288510 ... gene-QOZ80_5AG0396380, gene-QOZ80_5BG0444670
Poaceae	Hordeum vulgare	2	HORVU.MOREX.r3.4HG0394990.1, HORVU.MOREX.r3.5HG0436960.1
Poaceae	Lolium multiflorum	4	gene-QYE76_000622, gene-QYE76_000904, gene-QYE76_017571 ... gene-QYE76_069769
Poaceae	Oryza coarctata	4	Oco05G006970, Oco06G007200, Oco23G009670, Oco24G009370
Poaceae	Oryza sativa	3	LOC_Os03g12470.1, LOC_Os12g40419.1, LOC_Os12g41570.1
Poaceae	Paspalum vaginatum	3	gene-BS78_01G432200, gene-BS78_08G129100 ... gene-BS78_08G129200
Poaceae	Puccinellia tenuiflora	3	Pt_Chr0101827, Pt_Chr0101861, Pt_Chr0704225
Poaceae	Sporobolus alterniflorus	8	Chr01G028330, Chr04G000950, Chr04G018310, Chr06G018990 ... Chr06G019000, Chr07G010500, Chr12G011120, Chr27G008810
Poaceae	Thinopyrum elongatum	4	Tel4E01G410000, Tel5E01G114000, Tel5E01G131900 ... Tel5E01G132000
Poaceae	Triticum dicoccoides	6	gene_TRIDC4AG009020, gene_TRIDC4BG041980 ... gene_TRIDC5AG009750, gene_TRIDC5BG009550, gene_TRIDC5BG011380, gene_TRIDC5BG011410
Poaceae	Triticum aestivum	6	TraesCS4A02G062000.1, TraesCS4B02G238700.1 ... TraesCS4D02G238900.1, TraesCS5A02G062600.1, TraesCS5B02G069900.1, TraesCS5D02G073900.1
Poaceae	Zea mays	3	Zm00001eb009320_P003, Zm00001eb030730_P001 ... Zm00001eb030740_P001
Poaceae	Zoysia japonica	2	nbis-gene-2419, nbis-gene-30479
Poaceae	Zoysia macrostachya	2	Zma_g1739, Zma_g26063
Portulacaceae	Portulaca oleracea	4	evm.TU.LG05.239, evm.TU.LG05.708, evm.TU.LG25.1074 ... evm.TU.LG25.615
Posidoniaceae	Posidonia oceanica	1	gene.Posoc03g28190
Rhizophoraceae	Bruguiera sexangula	5	evm.TU.Scaffold_3_RagTag.302, evm.TU.Scaffold_3_RagTag.303 ... evm.TU.Scaffold_6_RagTag.1944, evm.TU.Scaffold_7_RagTag.524, evm.TU.Scaffold_7_RagTag.525
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-17191, nbisL1-mrna-19105
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-16522, nbisL1-mrna-3132, nbisL1-mrna-3807 ... nbisL1-mrna-9173
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-11848, nbisL1-mrna-21872
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000002l.529, evm.TU.utg000011l.1185 ... evm.TU.utg000019l.1062
Rhizophoraceae	Kandelia obovata	3	Maker00007115, Maker00012128, Maker00012659
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-15550, nbisL1-mrna-5836, nbisL1-mrna-6465
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-12458, nbisL1-mrna-2277, nbisL1-mrna-3155
Salicaceae	Populus euphratica	3	populus_peu14273, populus_peu23485, populus_peu31940
Solanaceae	Lycium barbarum	2	gene-LOC132621221, gene-LOC132627940
Solanaceae	Solanum chilense	2	SOLCI003384700, SOLCI003581400
Solanaceae	Solanum pennellii	2	gene-LOC107011525, gene-LOC107017918
Tamaricaceae	Reaumuria soongarica	1	STRG.8783_chr03_+
Tamaricaceae	Tamarix chinensis	3	TC04G2142, TC09G1196, TC11G0513
Zosteraceae	Zostera marina	1	Zosma06g01610.v3.1