Basic Information
Locus ID:
Ag1G01465
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Short Name:
WRKY14
Description:
WRKY Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 186835544 | 186837841 | + | Ag1G01465 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.38 | 49,371.78 Da | 51.31 | 54.87 | -0.78 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 227 | 284 | 2.4E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 224 | 286 | 3.53E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 199 | 279 | 4.8E-31 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 225 | 285 | 1.4E-37 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 220 | 286 | 33.097443 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 278 | 349 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 278 | 325 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30650.1 | WRKY DNA-binding protein 14. member of WRKY Transcription Factor; Group II-e | 0 |
| RefSeq | XP_017232385.1 | PREDICTED: probable WRKY transcription factor 35 [Daucus carota subsp. sativus] | 0 |
| Q9SA80 | Probable WRKY transcription factor 14 OS=Arabidopsis thaliana OX=3702 GN=WRKY14 PE=2 SV=2 | 0 | |
| TrEMBL | A0A166EU00 | WRKY domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_007815 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| PRJNA723697 | SRX10692252 | 0.07173 | Shengqin NO.2 | seed | S1-1 | S1-1 | initial formation stage (S1) |
| PRJNA723697 | SRX10692254 | 0.303529 | Shengqin NO.2 | seed | S1-3 | S1-3 | initial formation stage (S1) |
| PRJNA723697 | SRX10692255 | 0 | Shengqin NO.2 | seed | S3-1 | S3-1 | middle development stage (S3) |
| PRJNA723697 | SRX10692256 | 0.278297 | Shengqin NO.2 | seed | S3-2 | S3-2 | middle development stage (S3) |
| PRJNA723697 | SRX10692257 | 0.164189 | Shengqin NO.2 | seed | S3-3 | S3-3 | middle development stage (S3) |
| PRJNA723697 | SRX10692258 | 0.46816 | Shengqin NO.2 | seed | S5-1 | S5-1 | maturation stage (S5) |
| PRJNA723697 | SRX10692259 | 0.249128 | Shengqin NO.2 | seed | S5-2 | S5-2 | maturation stage (S5) |
| PRJNA723697 | SRX10692260 | 0.169946 | Shengqin NO.2 | seed | S5-3 | S5-3 | maturation stage (S5) |
| PRJNA884666 | SRX17729272 | 1.489054 | celery | anther | W99A-r1 | male sterile line | |
| PRJNA884666 | SRX17729273 | 1.710511 | celery | anther | W99A-r2 | male sterile line | |
| PRJNA884666 | SRX17729274 | 0.773292 | celery | anther | W99A-r3 | male sterile line | |
| PRJNA884666 | SRX17729275 | 1.740233 | celery | anther | W99B-r1 | maintainer line | |
| PRJNA884666 | SRX17729276 | 1.532493 | celery | anther | W99B-r2 | maintainer line | |
| PRJNA884666 | SRX17729277 | 1.500634 | celery | anther | W99B-r3 | maintainer line | |
| PRJNA884180 | SRX17743889 | 0 | var. secalinum Yablochny | collenchyma | Col_S1_rep1-1 | ||
| PRJNA884180 | SRX17748056 | 0 | var. secalinum Yablochny | collenchyma | Col_S1_rep3 | biological replicate 3 | |
| PRJNA884180 | SRX17748057 | 0 | var. secalinum Yablochny | collenchyma | Col_S1_rep4 | biological replicate 4 | |
| PRJNA884180 | SRX17748678 | 0 | var. secalinum Yablochny | parenchyma | Par_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17748679 | 0 | var. secalinum Yablochny | parenchyma | Par_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17748680 | 0.241345 | var. secalinum Yablochny | parenchyma | Par_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17748681 | 0.158576 | var. secalinum Yablochny | parenchyma | Par_S1_rep4 | Biological replicate 4 | |
| PRJNA884180 | SRX17748898 | 0 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17748899 | 0 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17748900 | 0 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17748901 | 0.053857 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep4 | Biological replicate 4 | |
| PRJNA884180 | SRX17749129 | 0 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17749130 | 0 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17749131 | 0 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17749132 | 0 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep4 | Biological replicate 4 | |
| PRJNA1124269 | SRX24936411 | 0 | leaf | CK1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936412 | 0.036656 | leaf | CK2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936413 | 0 | leaf | CK3 | replicate=biological replicate3 | ||
| PRJNA1124269 | SRX24936414 | 0.355181 | leaf | D1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936415 | 2.232542 | leaf | D2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936416 | 0 | leaf | D3 | replicate=biological replicate3 | ||
| PRJNA1124269 | SRX24936417 | 0.12855 | leaf | MD1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936418 | 0 | leaf | MD2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936419 | 0.159913 | leaf | MD3 | replicate=biological replicate3 | ||
| PRJNA387092 | SRX2833309 | 0 | shanghaihuangxin | leaf | leaves between 0.5 and 1 cm in breadth, folded; | stage 2 | |
| PRJNA387092 | SRX2833321 | 0 | shanghaihuangxin | leaf | leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion | stage 5 | |
| PRJNA387092 | SRX2833323 | 0 | shanghaihuangxin | leaf | leaves >3 cm, unfolded, with clearstem extension | stage 7 | |
| PRJNA543957 | SRX5879598 | 0.862138 | Zhangzhou lvqing | stem | Se3 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879599 | 0.253588 | Zhangzhou lvqing | stem | Se2 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879600 | 0.878255 | Zhangzhou lvqing | stem | Mock2 | mock | |
| PRJNA543957 | SRX5879601 | 0.334675 | Zhangzhou lvqing | stem | Mock1 | mock | |
| PRJNA543957 | SRX5879602 | 0.771796 | Zhangzhou lvqing | stem | Se1 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879603 | 0.175416 | Zhangzhou lvqing | stem | Mock3 | mock | |
| PRJNA609149 | SRX7815917 | 6.764738 | Jinnan Shiqin | flower bud | early flower bud | early flower bud | |
| PRJNA609149 | SRX7815918 | 11.845793 | Jinnan Shiqin | flower bud | middle flower bud | middle flower bud | |
| PRJNA609149 | SRX7815919 | 6.766352 | Jinnan Shiqin | flower bud | early flowering period | early flowering period |
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg20844, jg22360, jg25065 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_22690 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000010549, gene:ENSEOMG00000032762 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0009680, CQ.Regalona.r1.8BG0010660 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30077760 |
| Apiaceae | Apium graveolens | 2 | Ag1G01465, Ag7G01832 |
| Arecaceae | Cocos nucifera | 2 | COCNU_07G002900, COCNU_10G002070 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103699722, gene-LOC103706394 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_01.687.V1.1, AsparagusV1_04.907.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri15G26134 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT1G30650.1, AT2G34830.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10007691m.g.v1.0, Thhalv10016714m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp1g26550.v2.2, Sp4g17110.v2.2 |
| Brassicaceae | Brassica nigra | 4 | BniB01g009450.2N, BniB03g034510.2N, BniB04g046190.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G0615 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G0714 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno13g02950, gene.Cymno17g03920 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g00530 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-4855, nbisL1-mrna-652 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG12.1100 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00012994, Pov_00038582 |
| Poaceae | Echinochloa crus-galli | 12 | AH01.2754, AH01.621, AH07.3106, AH09.2162, BH01.107 ... |
| Poaceae | Eleusine coracana subsp. coracana | 8 | gene-QOZ80_2AG0118570, gene-QOZ80_2AG0141970 ... |
| Poaceae | Hordeum vulgare | 4 | HORVU.MOREX.r3.1HG0053860.1, HORVU.MOREX.r3.2HG0194370.1 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_012979, gene-QYE76_024588, gene-QYE76_046049 ... |
| Poaceae | Oryza coarctata | 7 | Oco03G018940, Oco04G019690, Oco05G029300, Oco06G030310 ... |
| Poaceae | Oryza sativa | 3 | LOC_Os02g47060.1, LOC_Os03g63810.1, LOC_Os04g50920.1 |
| Poaceae | Paspalum vaginatum | 4 | gene-BS78_01G005400, gene-BS78_01G270900 ... |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0203844, Pt_Chr0203864, Pt_Chr0301478, Pt_Chr0301518 ... |
| Poaceae | Sporobolus alterniflorus | 13 | Chr04G032820, Chr06G004470, Chr06G021540, Chr07G032040 ... |
| Poaceae | Thinopyrum elongatum | 3 | Tel1E01G341400, Tel2E01G753100, Tel6E01G493100 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC1AG029960, gene_TRIDC1BG035450 ... |
| Poaceae | Triticum aestivum | 12 | TraesCS1A02G197400.1, TraesCS1B02G212000.1 ... |
| Poaceae | Zea mays | 6 | Zm00001eb025220_P001, Zm00001eb064880_P002 ... |
| Poaceae | Zoysia japonica | 7 | nbis-gene-16782, nbis-gene-22156, nbis-gene-22733 ... |
| Poaceae | Zoysia macrostachya | 7 | Zma_g13014, Zma_g14195, Zma_g15779, Zma_g16948, Zma_g20359 ... |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG06.852, evm.TU.LG11.7 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc10g06030 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_14_RagTag.1025 ... |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-16867, nbisL1-mrna-25076 |
| Rhizophoraceae | Ceriops tagal | 3 | nbisL1-mrna-4798, nbisL1-mrna-5260, nbisL1-mrna-5889 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-17314, nbisL1-mrna-19262 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000022l.33, evm.TU.utg000025l.153 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00012238, Maker00016033 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-33, nbisL1-mrna-8605 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-10258, nbisL1-mrna-23019 |
| Salicaceae | Populus euphratica | 2 | populus_peu00118, populus_peu17182 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132631659 |
| Solanaceae | Solanum chilense | 1 | SOLCI005063400 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107010398 |
| Tamaricaceae | Reaumuria soongarica | 1 | MSTRG.14399_chr08_- |
| Tamaricaceae | Tamarix chinensis | 1 | TC06G1190 |
| Zosteraceae | Zostera marina | 1 | Zosma03g24350.v3.1 |