Basic Information
Locus ID:
Ag1G00421
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 54326110 | 54327314 | - | Ag1G00421 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.25 | 30,115.97 Da | 51.39 | 92.51 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 199 | 254 | 2.16E-5 | IPR015300 |
| Gene3D | G3DSA:2.40.330.10 | - | 158 | 261 | 2.3E-5 | IPR015300 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_017233687.1 | PREDICTED: uncharacterized protein LOC108207768 [Daucus carota subsp. sativus] | 0 |
| TrEMBL | A0A166HBM6 | TF-B3 domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_002705 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 54 | Ag10G00036, Ag10G00367, Ag10G00397, Ag10G00497, Ag10G00882 ... |