HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Ag11G04922
Species & Taxonomic ID: Apium graveolens & 4045
Genome Assembly: GCA_009905375.1
Description: WD40 repeats
Maps and Mapping Data
Chromosome Start End Strand ID
chr11 203275202 203281671 + Ag11G04922
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.29 12,284.58 Da 31.22 70.82 -0.23
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF50978 WD40 repeat-like 27 100 1.55E-5 IPR036322
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K13124 (mitogen-activated protein kinase organizer 1)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G64730.1 Transducin/WD40 repeat-like superfamily protein. 0
RefSeq XP_017243204.1 PREDICTED: WD repeat domain-containing protein 83 [Daucus carota subsp. sativus] 0
TrEMBL A0A2N9GWF1 WD_REPEATS_REGION domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS34568 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
Network
🔍 Co-expression Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Apiaceae Apium graveolens 2 Ag11G04920, Ag11G04922
Arecaceae Phoenix dactylifera 1 gene-LOC103703185
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.