Basic Information
Locus ID:
Ag11G04618
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
DNA recombination
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 189007788 | 189010411 | + | Ag11G04618 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.94 | 39,795.39 Da | 32.87 | 93.35 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04476 | RPA1_DBD_C | 170 | 312 | 3.15362E-22 | IPR013955 |
| Pfam | PF08646 | Replication factor-A C terminal domain | 172 | 286 | 1.8E-12 | IPR013955 |
| SUPERFAMILY | SSF50249 | Nucleic acid-binding proteins | 168 | 291 | 3.43E-22 | IPR012340 |
| Gene3D | G3DSA:2.40.50.140 | - | 141 | 313 | 4.1E-30 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 336 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 358 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_017239612.1 | PREDICTED: uncharacterized protein LOC108212396 [Daucus carota subsp. sativus] | 0 |
| TrEMBL | A0A6L5B9L1 | Rep_fac-A_C domain-containing protein OS=Apium graveolens OX=4045 GN=AG4045_008303 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|
Orthology