Basic Information
Locus ID:
Ag11G04491
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
aminoacylase activity
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 179873126 | 179876001 | - | Ag11G04491 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.13 | 36,491.51 Da | 39.07 | 76.98 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38225.1 | 0 | |
| RefSeq | XP_017234748.1 | PREDICTED: uncharacterized protein LOC108208736 isoform X2 [Daucus carota subsp. sativus] | 0 |
| TrEMBL | A0A166DMG8 | SCP domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_006267 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| PRJNA723697 | SRX10692252 | 9.911251 | Shengqin NO.2 | seed | S1-1 | S1-1 | initial formation stage (S1) |
| PRJNA723697 | SRX10692254 | 13.111877 | Shengqin NO.2 | seed | S1-3 | S1-3 | initial formation stage (S1) |
| PRJNA723697 | SRX10692255 | 7.696961 | Shengqin NO.2 | seed | S3-1 | S3-1 | middle development stage (S3) |
| PRJNA723697 | SRX10692256 | 9.396589 | Shengqin NO.2 | seed | S3-2 | S3-2 | middle development stage (S3) |
| PRJNA723697 | SRX10692257 | 9.360578 | Shengqin NO.2 | seed | S3-3 | S3-3 | middle development stage (S3) |
| PRJNA723697 | SRX10692258 | 8.619959 | Shengqin NO.2 | seed | S5-1 | S5-1 | maturation stage (S5) |
| PRJNA723697 | SRX10692259 | 6.073397 | Shengqin NO.2 | seed | S5-2 | S5-2 | maturation stage (S5) |
| PRJNA723697 | SRX10692260 | 5.166602 | Shengqin NO.2 | seed | S5-3 | S5-3 | maturation stage (S5) |
| PRJNA884666 | SRX17729272 | 14.071052 | celery | anther | W99A-r1 | male sterile line | |
| PRJNA884666 | SRX17729273 | 15.758051 | celery | anther | W99A-r2 | male sterile line | |
| PRJNA884666 | SRX17729274 | 15.605556 | celery | anther | W99A-r3 | male sterile line | |
| PRJNA884666 | SRX17729275 | 12.11486 | celery | anther | W99B-r1 | maintainer line | |
| PRJNA884666 | SRX17729276 | 17.400578 | celery | anther | W99B-r2 | maintainer line | |
| PRJNA884666 | SRX17729277 | 17.929546 | celery | anther | W99B-r3 | maintainer line | |
| PRJNA884180 | SRX17743889 | 10.553477 | var. secalinum Yablochny | collenchyma | Col_S1_rep1-1 | ||
| PRJNA884180 | SRX17748056 | 15.709926 | var. secalinum Yablochny | collenchyma | Col_S1_rep3 | biological replicate 3 | |
| PRJNA884180 | SRX17748057 | 11.803905 | var. secalinum Yablochny | collenchyma | Col_S1_rep4 | biological replicate 4 | |
| PRJNA884180 | SRX17748678 | 31.964491 | var. secalinum Yablochny | parenchyma | Par_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17748679 | 41.340843 | var. secalinum Yablochny | parenchyma | Par_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17748680 | 37.625721 | var. secalinum Yablochny | parenchyma | Par_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17748681 | 37.291618 | var. secalinum Yablochny | parenchyma | Par_S1_rep4 | Biological replicate 4 | |
| PRJNA884180 | SRX17748898 | 13.927523 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17748899 | 9.374163 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17748900 | 10.415871 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17748901 | 15.051129 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep4 | Biological replicate 4 | |
| PRJNA884180 | SRX17749129 | 25.304243 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17749130 | 28.877752 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17749131 | 43.684868 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17749132 | 22.733061 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep4 | Biological replicate 4 | |
| PRJNA1124269 | SRX24936411 | 25.721098 | leaf | CK1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936412 | 44.884071 | leaf | CK2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936413 | 29.8995 | leaf | CK3 | replicate=biological replicate3 | ||
| PRJNA1124269 | SRX24936414 | 32.743839 | leaf | D1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936415 | 22.267519 | leaf | D2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936416 | 41.679409 | leaf | D3 | replicate=biological replicate3 | ||
| PRJNA1124269 | SRX24936417 | 38.833324 | leaf | MD1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936418 | 19.225706 | leaf | MD2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936419 | 25.288282 | leaf | MD3 | replicate=biological replicate3 | ||
| PRJNA387092 | SRX2833309 | 43.277302 | shanghaihuangxin | leaf | leaves between 0.5 and 1 cm in breadth, folded; | stage 2 | |
| PRJNA387092 | SRX2833321 | 86.184998 | shanghaihuangxin | leaf | leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion | stage 5 | |
| PRJNA387092 | SRX2833323 | 139.944214 | shanghaihuangxin | leaf | leaves >3 cm, unfolded, with clearstem extension | stage 7 | |
| PRJNA543957 | SRX5879598 | 39.472969 | Zhangzhou lvqing | stem | Se3 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879599 | 30.241867 | Zhangzhou lvqing | stem | Se2 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879600 | 19.055923 | Zhangzhou lvqing | stem | Mock2 | mock | |
| PRJNA543957 | SRX5879601 | 18.949255 | Zhangzhou lvqing | stem | Mock1 | mock | |
| PRJNA543957 | SRX5879602 | 34.084339 | Zhangzhou lvqing | stem | Se1 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879603 | 18.184048 | Zhangzhou lvqing | stem | Mock3 | mock | |
| PRJNA609149 | SRX7815917 | 17.486921 | Jinnan Shiqin | flower bud | early flower bud | early flower bud | |
| PRJNA609149 | SRX7815918 | 20.084269 | Jinnan Shiqin | flower bud | middle flower bud | middle flower bud | |
| PRJNA609149 | SRX7815919 | 19.831327 | Jinnan Shiqin | flower bud | early flowering period | early flowering period |
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg26103 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_26604 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah009844 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g215760 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg11218, Sbi_jg46193 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg20520 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00005435 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl56335, Sgl61844 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000013820, gene:ENSEOMG00000037683 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.7BG0004440, CQ.Regalona.r1.9AG0020220 |
| Apiaceae | Apium graveolens | 1 | Ag11G04491 |
| Arecaceae | Cocos nucifera | 1 | scaffold004248G000010 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103704941 |
| Asteraceae | Flaveria trinervia | 1 | Ftri5G26324 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G38225.3 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10025549m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp7g37510.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB02g052530.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G1893 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl07G2063 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno14g07410 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0077s00035.v1.0, Dusal.0124s00004.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g13110 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG08.440 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00007035 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb3G15941, Lb3G17844 |
| Poaceae | Echinochloa crus-galli | 4 | AH01.5170, AH09.420, BH01.5042, CH01.5642 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0232190, gene-QOZ80_3BG0295750 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0410690.1 |
| Poaceae | Oryza coarctata | 2 | Oco05G001730, Oco06G001710 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g03670.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G495700 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr04G005510, Chr07G006060 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G529800 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC7BG038000 |
| Poaceae | Triticum aestivum | 2 | TraesCS4B02G321900.1, TraesCS5A02G490100.1 |
| Poaceae | Zea mays | 1 | Zm00001eb002190_P001 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-27298, nbis-gene-3051, nbis-gene-43427 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g2165 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG08.902, evm.TU.LG22.1024 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc06g15490 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.2399 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-5170 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-21441 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-3183 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000016l.11 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00016620 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-18555 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-22523 |
| Salicaceae | Populus euphratica | 1 | populus_peu08413 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132606686 |
| Solanaceae | Solanum chilense | 1 | SOLCI000797500 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107002237 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_8813 |
| Tamaricaceae | Tamarix chinensis | 1 | TC10G0278 |
| Zosteraceae | Zostera marina | 1 | Zosma05g33780.v3.1 |