halophFGD

Basic Information

Locus ID: Ag11G04166

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr11	147214248	147214661	+	Ag11G04166

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.77	16,048.74 Da	45.72	96.57	-0.16

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_017222320.1	PREDICTED: uncharacterized protein LOC108199075 [Daucus carota subsp. sativus]	0
TrEMBL	A0A175YLT8	FBA_3 domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_028233 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	14.180499	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	12.893774	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	9.719207	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	11.59924	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	14.433466	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	14.795856	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	14.769826	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	10.492089	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	11.973159	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	16.255194	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	15.621781	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	11.145164	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	11.9311	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	11.128088	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	10.951569	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	13.059824	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	15.505795	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	5.534585	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	4.086453	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	3.364099	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	8.411507	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	8.721815	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	13.000494	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	18.142654	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	9.150101	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	5.100425	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	11.806434	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	6.853891	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	5.530493	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	17.830999		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	15.679991		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	10.097735		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	7.96639		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	18.51972		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	11.298782		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	11.251496		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	12.272004		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	11.210182		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	10.257658	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	10.972308	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	7.948908	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	15.470405	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	6.389378	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	10.589263	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	16.784348	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	11.154728	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	1.977218	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	40.860779	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	48.471783	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	54.447681	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Apiaceae	Apium graveolens	9	Ag10G02420, Ag10G02939, Ag11G04165, Ag11G04166, Ag2G00168 ... Ag2G00183, Ag2G00667, Ag4G00711, Ag8G00465