halophFGD

Basic Information

Locus ID: Ag11G04136

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: non-specific phospholipase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr11	143271636	143276630	-	Ag11G04136

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.41	60,012.36 Da	35.47	76.79	-0.37

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF04185	Phosphoesterase family	36	395	4.2E-107	IPR007312
Gene3D	G3DSA:3.40.720.10	Alkaline Phosphatase, subunit A	255	438	1.3E-46	IPR017850
Gene3D	G3DSA:3.40.720.10	Alkaline Phosphatase, subunit A	28	214	5.8E-30	IPR017850

Gene Ontology

Molecular Function:

GO:0003824 (catalytic activity) GO:0016788 (hydrolase activity, acting on ester bonds)

KEGG Pathway

KO Term:

K01114 (phospholipase C [EC:3.1.4.3])

Pathway:

ko00562 (Inositol phosphate metabolism) map00562 (Inositol phosphate metabolism) ko00564 (Glycerophospholipid metabolism) map00564 (Glycerophospholipid metabolism) ko00565 (Ether lipid metabolism) map00565 (Ether lipid metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites) ko02024 (Quorum sensing) map02024 (Quorum sensing)

Reaction:

R01312 (Phosphatidylcholine + H2O <=> 1,2-Diacyl-sn-glycerol + Choline phosphate) R02027 (Phosphatidylglycerol + H2O <=> 1,2-Diacyl-sn-glycerol + sn-Glycerol 3-phosphate) R02052 (Phosphatidylethanolamine + H2O <=> 1,2-Diacyl-sn-glycerol + Ethanolamine phosphate) R03332 (1-Phosphatidyl-D-myo-inositol + H2O <=> Inositol 1-phosphate + 1,2-Diacyl-sn-glycerol) R07381 (O-1-Alk-1-enyl-2-acyl-sn-glycero-3-phosphoethanolamine + H2O <=> 1-Alkenyl-2-acylglycerol + Ethanolamine phosphate)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G07230.1	non-specific phospholipase C1.
RefSeq	XP_017236891.1	PREDICTED: non-specific phospholipase C1 [Daucus carota subsp. sativus]
Swiss-Prot	Q8L7Y9	Non-specific phospholipase C1 OS=Arabidopsis thaliana OX=3702 GN=NPC1 PE=2 SV=1
TrEMBL	A0A166DBR1	Non-specific phospholipase C1 OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_005893 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	16.883974	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	15.290612	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	18.790037	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	20.777277	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	18.77545	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	17.172281	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	17.042141	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	14.77224	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	25.983845	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	26.849497	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	28.579075	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	33.115303	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	28.31889	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	27.349892	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	24.077316	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	16.889036	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	17.65004	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	12.866972	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	13.547281	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	12.002136	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	12.40141	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	8.991584	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	5.869122	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	9.355165	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	10.071527	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	13.301608	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	12.518303	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	11.775397	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	14.367814	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	4.693331		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	4.783558		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	4.254325		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	18.551039		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	13.669202		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	14.941122		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	13.643324		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	5.008453		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	7.820664		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	11.387243	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	14.907526	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	11.338898	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	5.750774	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	7.793808	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	9.12334	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	8.406594	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	5.851691	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	12.138542	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	20.161711	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	25.955889	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	23.294107	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	8	jg13373, jg16656, jg1696, jg18453, jg20015, jg29107, jg29109 ... jg38014
Aizoaceae	Mesembryanthemum crystallinum	6	gene_11586, gene_1248, gene_1249, gene_1250, gene_19823 ... gene_6910
Amaranthaceae	Atriplex hortensis	5	Ah001804, Ah005074, Ah023390, Ah023392, Ah027856
Amaranthaceae	Beta vulgaris	2	BVRB_4g073710, BVRB_7g172340
Amaranthaceae	Salicornia bigelovii	8	Sbi_jg29034, Sbi_jg29035, Sbi_jg29080, Sbi_jg31756 ... Sbi_jg3260, Sbi_jg3300, Sbi_jg34959, Sbi_jg62445
Amaranthaceae	Salicornia europaea	6	Seu_jg1019, Seu_jg25228, Seu_jg3149, Seu_jg6636, Seu_jg6670 ... Seu_jg6671
Amaranthaceae	Suaeda aralocaspica	6	GOSA_00000081, GOSA_00000082, GOSA_00000115, GOSA_00003348 ... GOSA_00007209, GOSA_00029284
Amaranthaceae	Suaeda glauca	13	Sgl11471, Sgl11526, Sgl11527, Sgl16871, Sgl16903, Sgl16904 ... Sgl17024, Sgl17025, Sgl54144, Sgl59145, Sgl59462, Sgl72771, Sgl76309
Amaranthaceae	Chenopodium album	11	gene:ENSEOMG00000007418, gene:ENSEOMG00000007658 ... gene:ENSEOMG00000009522, gene:ENSEOMG00000012764, gene:ENSEOMG00000015490, gene:ENSEOMG00000030200, gene:ENSEOMG00000034183, gene:ENSEOMG00000039827, gene:ENSEOMG00000043204, gene:ENSEOMG00000048727, gene:ENSEOMG00000050641
Amaranthaceae	Chenopodium quinoa	6	CQ.Regalona.r1.1AG0008250, CQ.Regalona.r1.2BG0021150 ... CQ.Regalona.r1.4AG0002220, CQ.Regalona.r1.5AG0017100, CQ.Regalona.r1.5BG0018400, CQ.Regalona.r1.9BG0001480
Anacardiaceae	Pistacia vera	4	pistato.v30011940, pistato.v30061550, pistato.v30094120 ... pistato.v30095350
Apiaceae	Apium graveolens	4	Ag10G00220, Ag10G00363, Ag11G04136, Ag6G01511
Arecaceae	Cocos nucifera	7	COCNU_02G009060, COCNU_02G017890, COCNU_04G000240 ... COCNU_07G003790, COCNU_14G006670, COCNU_16G002010, scaffold031403G000010
Arecaceae	Phoenix dactylifera	6	gene-LOC103701653, gene-LOC103707853, gene-LOC103711783 ... gene-LOC103716538, gene-LOC103716925, gene-LOC103719809
Asparagaceae	Asparagus officinalis	5	AsparagusV1_02.1110.V1.1, AsparagusV1_04.1671.V1.1 ... AsparagusV1_07.1695.V1.1, AsparagusV1_08.2027.V1.1, AsparagusV1_10.479.V1.1
Asteraceae	Flaveria trinervia	4	Ftri18G15666, Ftri5G14721, Ftri5G21205, Ftri9G04605
Brassicaceae	Arabidopsis thaliana	6	AT1G07230.1, AT2G26870.1, AT3G03520.1, AT3G03530.1 ... AT3G03540.1, AT3G48610.1
Brassicaceae	Eutrema salsugineum	5	Thhalv10001963m.g.v1.0, Thhalv10007332m.g.v1.0 ... Thhalv10010294m.g.v1.0, Thhalv10020472m.g.v1.0, Thhalv10020514m.g.v1.0
Brassicaceae	Schrenkiella parvula	5	Sp1g05990.v2.2, Sp3g02510.v2.2, Sp3g02520.v2.2 ... Sp4g08610.v2.2, Sp5g13360.v2.2
Brassicaceae	Brassica nigra	7	BniB01g016910.2N, BniB01g059830.2N, BniB01g059840.2N ... BniB05g049030.2N, BniB06g043450.2N, BniB07g060640.2N, BniB08g061860.2N
Casuarinaceae	Casuarina equisetifolia	5	Ceq01G2030, Ceq05G1618, Ceq05G1619, Ceq08G1512, Ceq08G1888
Casuarinaceae	Casuarina glauca	5	Cgl01G2207, Cgl01G2229, Cgl05G1614, Cgl08G1545, Cgl08G1943
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno02g18650, gene.Cymno03g08600, gene.Cymno04g06470 ... gene.Cymno07g03750
Hydrocharitaceae	Thalassia testudinum	4	gene.Thate01g16210, gene.Thate02g07190, gene.Thate05g09790 ... gene.Thate07g13350
Nitrariaceae	Nitraria sibirica	6	evm.TU.LG03.1878, evm.TU.LG03.1879, evm.TU.LG03.1881 ... evm.TU.LG05.646, evm.TU.LG09.1105, evm.TU.LG09.130
Plantaginaceae	Plantago ovata	5	Pov_00016305, Pov_00016927, Pov_00017208, Pov_00031238 ... Pov_00033556
Plumbaginaceae	Limonium bicolor	6	Lb0G36898, Lb3G15616, Lb3G19556, Lb3G20103, Lb3G20105 ... Lb5G27263
Poaceae	Echinochloa crus-galli	15	AH01.446, AH02.1071, AH02.4547, AH04.1809, BH01.120 ... BH01.295, BH02.1040, BH02.4601, BH04.1836, CH01.135, CH02.1149, CH02.4650, CH04.156, CH04.2065, CH09.3319
Poaceae	Eleusine coracana subsp. coracana	10	gene-QOZ80_1AG0006150, gene-QOZ80_1AG0046980 ... gene-QOZ80_1BG0054870, gene-QOZ80_1BG0096840, gene-QOZ80_3AG0207960, gene-QOZ80_3AG0209930, gene-QOZ80_3BG0252990, gene-QOZ80_3BG0255120, gene-QOZ80_9AG0683600, gene-QOZ80_9BG0709670
Poaceae	Hordeum vulgare	5	HORVU.MOREX.r3.1HG0085590.1, HORVU.MOREX.r3.3HG0232030.1 ... HORVU.MOREX.r3.3HG0322080.1, HORVU.MOREX.r3.5HG0527960.1, HORVU.MOREX.r3.7HG0752530.1.CDS1
Poaceae	Lolium multiflorum	4	gene-QYE76_026031, gene-QYE76_058204, gene-QYE76_060575 ... gene-QYE76_063249
Poaceae	Oryza coarctata	9	Oco01G030180, Oco02G000120, Oco02G031350, Oco05G027820 ... Oco05G029150, Oco06G028800, Oco06G030170, Oco21G007970, Oco22G009200
Poaceae	Oryza sativa	5	LOC_Os01g01190.1, LOC_Os01g72520.1, LOC_Os03g61130.1 ... LOC_Os03g63580.1, LOC_Os11g38050.1
Poaceae	Paspalum vaginatum	9	gene-BS78_01G007300, gene-BS78_01G025500, gene-BS78_K134700 ... gene-BS78_03G097100, gene-BS78_03G405800, gene-BS78_05G187900, gene-BS78_05G188200, gene-BS78_K279500, gene-BS78_K280000
Poaceae	Puccinellia tenuiflora	5	Pt_Chr0105876, Pt_Chr0206276, Pt_Chr0206293, Pt_Chr0605452 ... Pt_Ctg00069
Poaceae	Sporobolus alterniflorus	13	Chr01G001170, Chr02G000850, Chr02G002380, Chr02G025650 ... Chr04G031790, Chr05G003370, Chr05G032100, Chr05G033930, Chr07G030820, Chr0G004160, Chr10G008310, Chr12G032800, Chr16G005190
Poaceae	Thinopyrum elongatum	5	Tel3E01G148900, Tel3E01G806000, Tel3E01G807100 ... Tel4E01G035900, Tel5E01G776700
Poaceae	Triticum dicoccoides	9	gene_TRIDC3AG009960, gene_TRIDC3AG070420 ... gene_TRIDC3BG013660, gene_TRIDC3BG079720, gene_TRIDC4AG045760, gene_TRIDC4AG054990, gene_TRIDC4BG002660, gene_TRIDC5AG069750, gene_TRIDC5BG075680
Poaceae	Triticum aestivum	15	TraesCS3A02G083200.1, TraesCS3A02G439600.2 ... TraesCS3A02G492100.1, TraesCS3B02G098100.1, TraesCS3B02G552800.1, TraesCS3B02G553200.1, TraesCS3D02G083000.1, TraesCS3D02G499600.2, TraesCS4A02G298300.1, TraesCS4A02G369500.1, TraesCS4B02G015300.1, TraesCS4D02G013500.1, TraesCS5A02G489800.2, TraesCS5B02G503200.1, TraesCS5D02G504100.1
Poaceae	Zea mays	5	Zm00001eb063230_P001, Zm00001eb064750_P001 ... Zm00001eb127030_P001, Zm00001eb140620_P001, Zm00001eb211410_P001
Poaceae	Zoysia japonica	5	nbis-gene-15549, nbis-gene-15678, nbis-gene-28133 ... nbis-gene-32370, nbis-gene-43094
Poaceae	Zoysia macrostachya	5	Zma_g11958, Zma_g133, Zma_g2454, Zma_g35, Zma_g7450
Portulacaceae	Portulaca oleracea	12	evm.TU.LG02.218, evm.TU.LG03.1700, evm.TU.LG04.1729 ... evm.TU.LG04.1732, evm.TU.LG04.1733, evm.TU.LG08.1428, evm.TU.LG09.1458, evm.TU.LG10.1220, evm.TU.LG10.1223, evm.TU.LG10.1224, evm.TU.LG14.144, evm.TU.LG22.324
Posidoniaceae	Posidonia oceanica	5	gene.Posoc01g13600, gene.Posoc02g00080, gene.Posoc02g21030 ... gene.Posoc05g13030, gene.Posoc07g00450
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_11_RagTag.1141, evm.TU.Scaffold_12_RagTag.77 ... evm.TU.Scaffold_12_RagTag.137, evm.TU.Scaffold_1_RagTag.507
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-12336, nbisL1-mrna-24661, nbisL1-mrna-24723 ... nbisL1-mrna-7656
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-18703, nbisL1-mrna-3762, nbisL1-mrna-4573 ... nbisL1-mrna-96
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-12718, nbisL1-mrna-19386, nbisL1-mrna-19447 ... nbisL1-mrna-5534
Rhizophoraceae	Kandelia candel	9	add.evm.TU.utg000010l.80, add.evm.TU.utg000010l.82 ... add.evm.TU.utg000010l.85, evm.TU.utg000010l.210, evm.TU.utg000010l.211, evm.TU.utg000010l.212, evm.TU.utg000012l.312, evm.TU.utg000027l.483, evm.TU.utg000027l.526
Rhizophoraceae	Kandelia obovata	6	Maker00008449, Maker00008792, Maker00009052, Maker00010986 ... Maker00018013, Maker00018222
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-5470, nbisL1-mrna-5506, nbisL1-mrna-653 ... nbisL1-mrna-8483
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-11616, nbisL1-mrna-11669, nbisL1-mrna-646 ... nbisL1-mrna-8792
Salicaceae	Populus euphratica	10	populus_peu01787, populus_peu02013, populus_peu02019 ... populus_peu28475, populus_peu28872, populus_peu30272, populus_peu33563, populus_peu35795, populus_peu36031, populus_peu37485
Solanaceae	Lycium barbarum	3	gene-LOC132626385, gene-LOC132631185, gene-LOC132632463
Solanaceae	Solanum chilense	3	SOLCI001222800, SOLCI001492300, SOLCI001822800
Solanaceae	Solanum pennellii	3	gene-LOC107008090, gene-LOC107012102, gene-LOC107029460
Tamaricaceae	Reaumuria soongarica	6	STRG.15792_chr06_-, STRG.27951_chr04_-, STRG.9393_chr03_+ ... gene_15711, gene_9515, gene_9516
Tamaricaceae	Tamarix chinensis	4	TC02G2922, TC03G1913, TC09G0825, TC11G1186
Zosteraceae	Zostera marina	4	Zosma02g03920.v3.1, Zosma02g07220.v3.1, Zosma02g18350.v3.1 ... Zosma06g20290.v3.1