Basic Information
Locus ID:
Ag11G03848
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 93582351 | 93583640 | + | Ag11G03848 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.27 | 50,117.32 Da | 41.01 | 91.72 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 25 | 66 | 4.2E-6 | IPR001810 |
| Pfam | PF08268 | F-box associated domain | 239 | 319 | 1.5E-5 | IPR013187 |
| SUPERFAMILY | SSF81383 | F-box domain | 23 | 98 | 4.32E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 15 | 97 | 1.3E-6 | - |
| SMART | SM00256 | fbox_2 | 29 | 69 | 0.0018 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 132 | 356 | 4.3E-18 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_017239219.1 | PREDICTED: F-box/kelch-repeat protein At3g23880-like [Daucus carota subsp. sativus] | 0 |
| TrEMBL | A0A165ZGG8 | F-box domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_008763 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 19 | Ag10G01596, Ag10G01791, Ag10G02271, Ag10G02272, Ag10G02514 ... |
| Plantaginaceae | Plantago ovata | 1 | Pov_00008960 |