halophFGD

Basic Information

Locus ID: Ag11G03795

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: Monodehydroascorbate reductase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr11	85508222	85514079	-	Ag11G03795

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.61	52,845.63 Da	31.70	88.09	-0.10

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07992	Pyridine nucleotide-disulphide oxidoreductase	54	367	1.4E-54	IPR023753
SUPERFAMILY	SSF51905	FAD/NAD(P)-binding domain	50	253	1.65E-35	IPR036188
SUPERFAMILY	SSF51905	FAD/NAD(P)-binding domain	203	375	4.17E-30	IPR036188
Gene3D	G3DSA:3.50.50.60	-	55	370	4.0E-105	IPR036188
Gene3D	G3DSA:3.50.50.60	-	177	304	4.0E-105	IPR036188
Gene3D	G3DSA:3.30.390.30	-	387	475	2.6E-25	IPR016156
PRINTS	PR00368	FAD-dependent pyridine nucleotide reductase signature	209	227	5.8E-24	-
PRINTS	PR00368	FAD-dependent pyridine nucleotide reductase signature	322	344	5.8E-24	-
PRINTS	PR00411	Pyridine nucleotide disulphide reductase class-I signature	297	311	1.2E-15	-
PRINTS	PR00368	FAD-dependent pyridine nucleotide reductase signature	296	312	5.8E-24	-
PRINTS	PR00368	FAD-dependent pyridine nucleotide reductase signature	163	181	5.8E-24	-
PRINTS	PR00411	Pyridine nucleotide disulphide reductase class-I signature	53	75	1.2E-15	-
PRINTS	PR00411	Pyridine nucleotide disulphide reductase class-I signature	209	234	1.2E-15	-
PRINTS	PR00368	FAD-dependent pyridine nucleotide reductase signature	55	74	5.8E-24	-
PRINTS	PR00411	Pyridine nucleotide disulphide reductase class-I signature	337	344	1.2E-15	-

Gene Ontology

Molecular Function:

GO:0016491 (oxidoreductase activity) GO:0050660 (flavin adenine dinucleotide binding)

KEGG Pathway

KO Term:

K08232 (monodehydroascorbate reductase (NADH) [EC:1.6.5.4])

Pathway:

ko00053 (Ascorbate and aldarate metabolism) map00053 (Ascorbate and aldarate metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways)

Reaction:

R00095 (NAD+ + 2 Ascorbate <=> NADH + 2 Monodehydroascorbate + H+)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G63940.1	monodehydroascorbate reductase 6.
RefSeq	XP_017236856.1	PREDICTED: monodehydroascorbate reductase 5, mitochondrial [Daucus carota subsp. sativus]
Swiss-Prot	P92947	Monodehydroascorbate reductase, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MDAR5 PE=1 SV=3
TrEMBL	A0A166D508	Pyr_redox_2 domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_005569 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	16.651997	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	13.417315	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	11.490301	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	9.747552	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	10.270849	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	8.701253	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	8.375791	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	5.708719	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	37.043083	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	34.31879	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	37.813217	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	42.204357	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	42.58791	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	32.477276	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	22.176634	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	26.675789	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	36.13615	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	81.098808	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	64.254951	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	70.714684	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	80.331619	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	87.883598	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	86.241653	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	81.555779	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	76.588036	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	117.476822	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	92.865356	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	74.855408	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	105.119652	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	19.841732		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	11.993199		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	9.602256		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	23.259272		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	25.488447		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	19.167404		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	20.484018		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	15.366556		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	21.081554		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	40.83139	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	44.889828	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	42.309177	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	45.473866	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	13.200436	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	65.608284	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	57.506794	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	69.065895	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	67.465454	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	37.075073	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	39.302345	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	31.854643	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	2	jg4772, jg7655
Aizoaceae	Mesembryanthemum crystallinum	1	gene_1797
Amaranthaceae	Atriplex hortensis	1	Ah004559
Amaranthaceae	Beta vulgaris	1	BVRB_5g099950
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg23928, Sbi_jg7758
Amaranthaceae	Salicornia europaea	1	Seu_jg12270
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00001140
Amaranthaceae	Suaeda glauca	2	Sgl52110, Sgl57371
Amaranthaceae	Chenopodium album	3	gene:ENSEOMG00000006034, gene:ENSEOMG00000022025 ... gene:ENSEOMG00000026386
Amaranthaceae	Chenopodium quinoa	2	CQ.Regalona.r1.5AG0006830, CQ.Regalona.r1.5BG0007080
Anacardiaceae	Pistacia vera	1	pistato.v30135440
Apiaceae	Apium graveolens	1	Ag11G03795
Arecaceae	Cocos nucifera	1	COCNU_08G007280
Arecaceae	Phoenix dactylifera	1	gene-LOC103715799
Asparagaceae	Asparagus officinalis	1	AsparagusV1_08.274.V1.1
Asteraceae	Flaveria trinervia	1	Ftri14G04818
Brassicaceae	Arabidopsis thaliana	1	AT1G63940.2
Brassicaceae	Eutrema salsugineum	1	Thhalv10023425m.g.v1.0
Brassicaceae	Schrenkiella parvula	1	Sp2g00750.v2.2
Brassicaceae	Brassica nigra	1	BniB04g023750.2N
Casuarinaceae	Casuarina equisetifolia	1	Ceq03G0293
Casuarinaceae	Casuarina glauca	2	Cgl03G0339, Cgl03G0375
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno15g04820
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate08g09290
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-11236
Nitrariaceae	Nitraria sibirica	1	evm.TU.LG10.1451
Plantaginaceae	Plantago ovata	1	Pov_00005258
Plumbaginaceae	Limonium bicolor	1	Lb0G37904
Poaceae	Echinochloa crus-galli	3	AH08.308, BH08.310, CH08.386
Poaceae	Eleusine coracana subsp. coracana	2	gene-QOZ80_8AG0617310, gene-QOZ80_8BG0644940
Poaceae	Hordeum vulgare	1	HORVU.MOREX.r3.7HG0700760.1
Poaceae	Lolium multiflorum	2	gene-QYE76_032505, gene-QYE76_032520
Poaceae	Oryza coarctata	1	Oco15G002080
Poaceae	Oryza sativa	1	LOC_Os08g05570.3
Poaceae	Paspalum vaginatum	1	gene-BS78_07G042600
Poaceae	Puccinellia tenuiflora	1	Pt_Chr0405599
Poaceae	Sporobolus alterniflorus	2	Chr16G001170, Chr17G001110
Poaceae	Thinopyrum elongatum	1	Tel7E01G525700
Poaceae	Triticum dicoccoides	2	gene_TRIDC7AG042440, gene_TRIDC7BG033580
Poaceae	Triticum aestivum	3	TraesCS7A02G304000.1, TraesCS7B02G204400.1 ... TraesCS7D02G299500.1
Poaceae	Zea mays	1	Zm00001eb416430_P001
Poaceae	Zoysia japonica	1	nbis-gene-41573
Poaceae	Zoysia macrostachya	1	Zma_g23612
Portulacaceae	Portulaca oleracea	2	evm.TU.LG10.492, evm.TU.LG17.495
Posidoniaceae	Posidonia oceanica	1	gene.Posoc07g06770
Rhizophoraceae	Bruguiera sexangula	1	evm.TU.Scaffold_14_RagTag.159
Rhizophoraceae	Carallia pectinifolia	1	nbisL1-mrna-18244
Rhizophoraceae	Ceriops tagal	1	nbisL1-mrna-2857
Rhizophoraceae	Ceriops zippeliana	1	nbisL1-mrna-8570
Rhizophoraceae	Kandelia candel	1	evm.TU.utg000007l.288
Rhizophoraceae	Kandelia obovata	1	Maker00018397
Rhizophoraceae	Rhizophora apiculata	1	nbisL1-mrna-16013
Rhizophoraceae	Rhizophora mangle	1	nbisL1-mrna-10935
Salicaceae	Populus euphratica	1	populus_peu03607
Solanaceae	Lycium barbarum	1	gene-LOC132634855
Solanaceae	Solanum chilense	1	SOLCI003810000
Solanaceae	Solanum pennellii	1	gene-LOC107028810
Tamaricaceae	Reaumuria soongarica	1	gene_13893
Tamaricaceae	Tamarix chinensis	2	TC01G3380, TC06G0187