Basic Information
Locus ID:
Ag11G03430
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
Belongs to the 14-3-3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 17537754 | 17540866 | - | Ag11G03430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.84 | 29,060.12 Da | 41.17 | 82.06 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00244 | 14-3-3 protein | 11 | 232 | 7.5E-106 | IPR023410 |
| SUPERFAMILY | SSF48445 | 14-3-3 protein | 1 | 234 | 2.62E-105 | IPR036815 |
| Gene3D | G3DSA:1.20.190.20 | - | 1 | 244 | 1.8E-128 | IPR036815 |
| SMART | SM00101 | 1433_4 | 4 | 245 | 6.5E-170 | IPR023410 |
| PIRSF | PIRSF000868 | 14-3-3 | 1 | 244 | 1.9E-116 | IPR000308 |
| ProSitePatterns | PS00797 | 14-3-3 proteins signature 2. | 214 | 233 | - | IPR023409 |
| ProSitePatterns | PS00796 | 14-3-3 proteins signature 1. | 42 | 52 | - | IPR023409 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 85 | 109 | 1.2E-84 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 178 | 204 | 1.2E-84 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 36 | 65 | 1.2E-84 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 116 | 138 | 1.2E-84 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 151 | 177 | 1.2E-84 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 205 | 234 | 1.2E-84 | IPR000308 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 236 | 257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 257 | - | - |
| Coils | Coil | Coil | 192 | 212 | - | - |
KEGG Pathway
KO Term:
Pathway:
ko04011 (MAPK signaling pathway - yeast)
map04011 (MAPK signaling pathway - yeast)
ko04110 (Cell cycle)
map04110 (Cell cycle)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G42590.2 | general regulatory factor 9. 14-3-3 gene. Binds calcium and displays induced structural changes. | 0 |
| RefSeq | XP_017259094.1 | PREDICTED: 14-3-3 protein 9 [Daucus carota subsp. sativus] | 0 |
| P93214 | 14-3-3 protein 9 OS=Solanum lycopersicum OX=4081 GN=TFT9 PE=2 SV=2 | 0 | |
| TrEMBL | A0A164W6I0 | 14_3_3 domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_021289 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| PRJNA723697 | SRX10692252 | 121.986229 | Shengqin NO.2 | seed | S1-1 | S1-1 | initial formation stage (S1) |
| PRJNA723697 | SRX10692254 | 100.114853 | Shengqin NO.2 | seed | S1-3 | S1-3 | initial formation stage (S1) |
| PRJNA723697 | SRX10692255 | 101.338593 | Shengqin NO.2 | seed | S3-1 | S3-1 | middle development stage (S3) |
| PRJNA723697 | SRX10692256 | 103.176857 | Shengqin NO.2 | seed | S3-2 | S3-2 | middle development stage (S3) |
| PRJNA723697 | SRX10692257 | 106.622627 | Shengqin NO.2 | seed | S3-3 | S3-3 | middle development stage (S3) |
| PRJNA723697 | SRX10692258 | 88.562202 | Shengqin NO.2 | seed | S5-1 | S5-1 | maturation stage (S5) |
| PRJNA723697 | SRX10692259 | 83.31398 | Shengqin NO.2 | seed | S5-2 | S5-2 | maturation stage (S5) |
| PRJNA723697 | SRX10692260 | 56.400143 | Shengqin NO.2 | seed | S5-3 | S5-3 | maturation stage (S5) |
| PRJNA884666 | SRX17729272 | 172.857498 | celery | anther | W99A-r1 | male sterile line | |
| PRJNA884666 | SRX17729273 | 173.288239 | celery | anther | W99A-r2 | male sterile line | |
| PRJNA884666 | SRX17729274 | 173.431503 | celery | anther | W99A-r3 | male sterile line | |
| PRJNA884666 | SRX17729275 | 179.217804 | celery | anther | W99B-r1 | maintainer line | |
| PRJNA884666 | SRX17729276 | 171.481598 | celery | anther | W99B-r2 | maintainer line | |
| PRJNA884666 | SRX17729277 | 187.951538 | celery | anther | W99B-r3 | maintainer line | |
| PRJNA884180 | SRX17743889 | 210.050201 | var. secalinum Yablochny | collenchyma | Col_S1_rep1-1 | ||
| PRJNA884180 | SRX17748056 | 214.408768 | var. secalinum Yablochny | collenchyma | Col_S1_rep3 | biological replicate 3 | |
| PRJNA884180 | SRX17748057 | 263.440948 | var. secalinum Yablochny | collenchyma | Col_S1_rep4 | biological replicate 4 | |
| PRJNA884180 | SRX17748678 | 255.237839 | var. secalinum Yablochny | parenchyma | Par_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17748679 | 246.286514 | var. secalinum Yablochny | parenchyma | Par_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17748680 | 222.525467 | var. secalinum Yablochny | parenchyma | Par_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17748681 | 224.599014 | var. secalinum Yablochny | parenchyma | Par_S1_rep4 | Biological replicate 4 | |
| PRJNA884180 | SRX17748898 | 279.516571 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17748899 | 268.684753 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17748900 | 275.132721 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17748901 | 272.563019 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep4 | Biological replicate 4 | |
| PRJNA884180 | SRX17749129 | 282.487579 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17749130 | 323.095459 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17749131 | 257.391937 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17749132 | 298.861816 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep4 | Biological replicate 4 | |
| PRJNA1124269 | SRX24936411 | 138.450211 | leaf | CK1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936412 | 161.937592 | leaf | CK2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936413 | 150.145172 | leaf | CK3 | replicate=biological replicate3 | ||
| PRJNA1124269 | SRX24936414 | 207.853699 | leaf | D1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936415 | 140.555069 | leaf | D2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936416 | 189.807465 | leaf | D3 | replicate=biological replicate3 | ||
| PRJNA1124269 | SRX24936417 | 182.763062 | leaf | MD1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936418 | 244.39003 | leaf | MD2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936419 | 202.60495 | leaf | MD3 | replicate=biological replicate3 | ||
| PRJNA387092 | SRX2833309 | 98.333107 | shanghaihuangxin | leaf | leaves between 0.5 and 1 cm in breadth, folded; | stage 2 | |
| PRJNA387092 | SRX2833321 | 95.052757 | shanghaihuangxin | leaf | leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion | stage 5 | |
| PRJNA387092 | SRX2833323 | 88.300629 | shanghaihuangxin | leaf | leaves >3 cm, unfolded, with clearstem extension | stage 7 | |
| PRJNA543957 | SRX5879598 | 156.913086 | Zhangzhou lvqing | stem | Se3 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879599 | 219.410919 | Zhangzhou lvqing | stem | Se2 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879600 | 271.989502 | Zhangzhou lvqing | stem | Mock2 | mock | |
| PRJNA543957 | SRX5879601 | 190.804138 | Zhangzhou lvqing | stem | Mock1 | mock | |
| PRJNA543957 | SRX5879602 | 167.065445 | Zhangzhou lvqing | stem | Se1 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879603 | 240.48703 | Zhangzhou lvqing | stem | Mock3 | mock | |
| PRJNA609149 | SRX7815917 | 134.705963 | Jinnan Shiqin | flower bud | early flower bud | early flower bud | |
| PRJNA609149 | SRX7815918 | 100.315147 | Jinnan Shiqin | flower bud | middle flower bud | middle flower bud | |
| PRJNA609149 | SRX7815919 | 116.020515 | Jinnan Shiqin | flower bud | early flowering period | early flowering period |
Orthology