halophFGD

Basic Information

Locus ID: Ag10G03048

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: Ethanolamine-phosphate cytidylyltransferase-like

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr10	240622722	240630664	-	Ag10G03048

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.12	39,333.48 Da	41.31	89.94	-0.22

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd02174	CCT	63	205	1.0286E-77	IPR041723
Pfam	PF01467	Cytidylyltransferase-like	68	196	5.8E-25	IPR004821
Pfam	PF01467	Cytidylyltransferase-like	266	342	7.7E-13	IPR004821
SUPERFAMILY	SSF52374	Nucleotidylyl transferase	264	344	1.34E-17	-
SUPERFAMILY	SSF52374	Nucleotidylyl transferase	65	199	2.45E-29	-
Gene3D	G3DSA:3.40.50.620	HUPs	241	347	3.9E-38	IPR014729
Gene3D	G3DSA:3.40.50.620	HUPs	48	240	1.1E-59	IPR014729
TIGRFAM	TIGR00125	cyt_tran_rel: cytidyltransferase-like domain	264	331	5.1E-16	IPR004821
TIGRFAM	TIGR00125	cyt_tran_rel: cytidyltransferase-like domain	66	131	2.6E-19	IPR004821

Gene Ontology

Biological Process:

GO:0009058 (biosynthetic process)

Molecular Function:

GO:0003824 (catalytic activity)

KEGG Pathway

KO Term:

K00967 (ethanolamine-phosphate cytidylyltransferase [EC:2.7.7.14])

Pathway:

ko00440 (Phosphonate and phosphinate metabolism) map00440 (Phosphonate and phosphinate metabolism) ko00564 (Glycerophospholipid metabolism) map00564 (Glycerophospholipid metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways)

Module:

M00092 (Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE)

Reaction:

R02038 (CTP + Ethanolamine phosphate <=> Diphosphate + CDP-ethanolamine) R04247 (CTP + 2-Aminoethylphosphonate <=> Diphosphate + CMP-2-aminoethylphosphonate)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G38670.1	phosphorylethanolamine cytidylyltransferase 1. Encodes a mitochondrial ethanolamine-phosphate cytidylyltransferase, involved in phosphatidylethanolamine (PE) biosynthesis.
RefSeq	XP_017259062.1	PREDICTED: ethanolamine-phosphate cytidylyltransferase-like [Daucus carota subsp. sativus]
Swiss-Prot	Q9ZVI9	Ethanolamine-phosphate cytidylyltransferase OS=Arabidopsis thaliana OX=3702 GN=PECT1 PE=1 SV=1
TrEMBL	A0A164X7L9	ethanolamine-phosphate cytidylyltransferase OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_019824 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	29.357737	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	23.249273	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	17.698425	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	17.477509	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	18.033836	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	24.20348	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	20.2843	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	23.766434	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	34.031536	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	33.019779	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	32.607094	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	27.186573	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	27.785704	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	26.824913	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	31.650122	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	38.448009	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	19.453367	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	23.51936	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	24.142859	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	29.991447	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	18.375776	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	21.524923	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	26.03223	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	27.31011	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	22.241526	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	21.509104	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	22.067287	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	15.292672	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	20.35837	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	10.220937		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	14.34878		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	9.937149		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	14.014084		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	18.360937		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	16.79668		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	6.959676		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	9.918328		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	9.396594		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	16.533989	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	9.703132	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	6.741882	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	19.434494	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	25.767094	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	30.940285	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	33.451149	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	18.567289	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	26.671761	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	79.466309	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	86.712921	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	73.560783	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	2	jg14669, jg15256
Aizoaceae	Mesembryanthemum crystallinum	2	gene_10788, gene_6404
Amaranthaceae	Atriplex hortensis	2	Ah014737, Ah029224
Amaranthaceae	Beta vulgaris	2	BVRB_7g165520, BVRB_8g198120
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg1189, Sbi_jg25133, Sbi_jg35412, Sbi_jg8975
Amaranthaceae	Salicornia europaea	2	Seu_jg19618, Seu_jg3523
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00007663, GOSA_00026825
Amaranthaceae	Suaeda glauca	4	Sgl42421, Sgl47149, Sgl74142, Sgl77657
Amaranthaceae	Chenopodium album	6	gene:ENSEOMG00000006814, gene:ENSEOMG00000011250 ... gene:ENSEOMG00000034237, gene:ENSEOMG00000036642, gene:ENSEOMG00000041368, gene:ENSEOMG00000046359
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.7AG0011910, CQ.Regalona.r1.7BG0013980 ... CQ.Regalona.r1.8AG0018650, CQ.Regalona.r1.8BG0023750
Anacardiaceae	Pistacia vera	3	pistato.v30098120, pistato.v30098450, pistato.v30269790
Apiaceae	Apium graveolens	2	Ag10G01017, Ag10G03048
Arecaceae	Cocos nucifera	3	COCNU_04G004970, COCNU_11G010070, contig69223308G000010
Arecaceae	Phoenix dactylifera	3	gene-LOC103701455, gene-LOC103705906, gene-LOC103717881
Asparagaceae	Asparagus officinalis	4	AsparagusV1_02.1644.V1.1, AsparagusV1_04.924.V1.1 ... AsparagusV1_05.3576.V1.1, AsparagusV1_08.3288.V1.1
Asteraceae	Flaveria trinervia	3	Ftri10G12091, Ftri8G06574, Ftri9G09879
Brassicaceae	Arabidopsis thaliana	1	AT2G38670.1
Brassicaceae	Eutrema salsugineum	1	Thhalv10016709m.g.v1.0
Brassicaceae	Schrenkiella parvula	1	Sp4g21010.v2.2
Brassicaceae	Brassica nigra	3	BniB01g006420.2N, BniB06g005840.2N, BniB08g024690.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq03G2706, Ceq08G0839
Casuarinaceae	Casuarina glauca	2	Cgl03G2837, Cgl08G0857
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno02g17510, gene.Cymno03g03090
Dunaliellaceae	Dunaliella salina	1	Dusal.0784s00006.v1.0
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate06g06080
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG01.813, evm.TU.LG03.1744
Plantaginaceae	Plantago ovata	2	Pov_00003513, Pov_00007010
Plumbaginaceae	Limonium bicolor	2	Lb4G25619, Lb5G27473
Poaceae	Echinochloa crus-galli	9	AH04.119, AH07.46, AH08.682, BH04.119, BH05.69, BH08.726 ... CH04.92, CH05.103, CH08.809
Poaceae	Eleusine coracana subsp. coracana	6	gene-QOZ80_5AG0379520, gene-QOZ80_5BG0426590 ... gene-QOZ80_8AG0622060, gene-QOZ80_8BG0650420, gene-QOZ80_9AG0672840, gene-QOZ80_9BG0696520
Poaceae	Hordeum vulgare	3	HORVU.MOREX.r3.3HG0301530.1, HORVU.MOREX.r3.4HG0353900.1 ... HORVU.MOREX.r3.5HG0463760.1
Poaceae	Lolium multiflorum	5	gene-QYE76_003548, gene-QYE76_016406, gene-QYE76_033080 ... gene-QYE76_056435, gene-QYE76_065093
Poaceae	Oryza coarctata	6	Oco15G004370, Oco16G004130, Oco22G000770, Oco23G000030 ... Oco23G000710, Oco24G000110
Poaceae	Oryza sativa	4	LOC_Os08g12830.1, LOC_Os10g24810.1, LOC_Os11g03050.1 ... LOC_Os12g02820.1
Poaceae	Paspalum vaginatum	3	gene-BS78_05G020600, gene-BS78_07G086100 ... gene-BS78_08G015200
Poaceae	Puccinellia tenuiflora	7	Pt_Chr0103763, Pt_Chr0107726, Pt_Chr0108021, Pt_Chr0300040 ... Pt_Chr0402465, Pt_Chr0601501, Pt_Ctg00187
Poaceae	Sporobolus alterniflorus	8	Chr04G021180, Chr06G022790, Chr16G002900, Chr17G002630 ... Chr19G011800, Chr20G010070, Chr27G004220, Chr29G009730
Poaceae	Thinopyrum elongatum	3	Tel3E01G584700, Tel4E01G197600, Tel5E01G253600
Poaceae	Triticum dicoccoides	6	gene_TRIDC3AG052830, gene_TRIDC3BG059370 ... gene_TRIDC4AG030510, gene_TRIDC4BG019310, gene_TRIDC5AG024230, gene_TRIDC5BG025460
Poaceae	Triticum aestivum	9	TraesCS3A02G367200.1, TraesCS3B02G398900.1 ... TraesCS3D02G360100.1, TraesCS4A02G191400.1, TraesCS4B02G123900.1, TraesCS4D02G121900.1, TraesCS5A02G144300.1, TraesCS5B02G143400.1, TraesCS5D02G147700.1
Poaceae	Zea mays	3	Zm00001eb093730_P001, Zm00001eb195630_P001 ... Zm00001eb414050_P001
Poaceae	Zoysia japonica	3	nbis-gene-25767, nbis-gene-53422, nbis-gene-58324
Poaceae	Zoysia macrostachya	4	Zma_g22641, Zma_g22643, Zma_g23791, Zma_g24654
Portulacaceae	Portulaca oleracea	7	evm.TU.LG02.2744, evm.TU.LG02.2747, evm.TU.LG03.913 ... evm.TU.LG12.820, evm.TU.LG13.800, evm.TU.LG21.475, evm.TU.LG23.951
Posidoniaceae	Posidonia oceanica	1	gene.Posoc02g05560
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_1_RagTag.1050, evm.TU.Scaffold_2_RagTag.1277 ... evm.TU.Scaffold_4_RagTag.1996
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-25511, nbisL1-mrna-3921, nbisL1-mrna-3961 ... nbisL1-mrna-6554
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-12233, nbisL1-mrna-15036, nbisL1-mrna-7112
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-18740, nbisL1-mrna-21155, nbisL1-mrna-4771
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000008l.1157, evm.TU.utg000009l.457 ... evm.TU.utg000016l.881
Rhizophoraceae	Kandelia obovata	3	Maker00001497, Maker00005946, Maker00016247
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-11065, nbisL1-mrna-12360, nbisL1-mrna-14226
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-13260, nbisL1-mrna-21006, nbisL1-mrna-23217 ... nbisL1-mrna-24608
Salicaceae	Populus euphratica	4	populus_peu05784, populus_peu11155, populus_peu11562 ... populus_peu25202
Solanaceae	Lycium barbarum	3	gene-LOC132603282, gene-LOC132606700, gene-LOC132640594
Solanaceae	Solanum chilense	2	SOLCI003513000, SOLCI004674100
Solanaceae	Solanum pennellii	3	gene-LOC107002564, gene-LOC107019706, gene-LOC107026442
Tamaricaceae	Reaumuria soongarica	3	gene_4349, gene_7443, gene_9148
Tamaricaceae	Tamarix chinensis	2	TC07G0920, TC10G0819
Zosteraceae	Zostera marina	2	Zosma01g32760.v3.1, Zosma04g25050.v3.1